DY262808 | Citrus Genome Database

Overview


Name	DY262808
Unique Name	DY262808
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1331

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
DY262808_ssr165	microsatellite	DY262808_ssr165:165..176.	BLAST: Citrus ESTs to Prunus persica proteins V1

Homology

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 7.030e-115
Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            M KD++V          +A+DY DPPPAP  D EEL KW  YRAVIAEF+A            IGYK+QTD       CGGVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFL RKVSL+R +LY+VAQCLGAICGCGFVKAFQ SYY RYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:    1 MAKDLDVNESGPP----AARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 233

HSP 2 Score: 43.8986 bits (102), Expect = 7.030e-115
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGS 985
            WVG  IG   AAFYHQ+I +A AIKALGS
Sbjct:  252 WVGPMIGAAAAAFYHQFILRAAAIKALGS 280

HSP 3 Score: 43.1282 bits (100), Expect = 7.030e-115
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FGAAVIYN EKAWD+QWIF
Sbjct:  233 FGAAVIYNNEKAWDDQWIF 251

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 1.300e-113
Identity = 183/238 (76.89%), Postives = 195/238 (81.93%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNL-NTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            M KDVE          +SAKDYHDPPPAPLID +EL KWS YRA IAEFIA            IGYK Q+D  +    +C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSL+RALLYM+AQC GAICG G  K FQKS+YNRYGGG N ++DGYNKGT LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSF
Sbjct:    1 MAKDVEQVTEQGE---YSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSF 235

HSP 2 Score: 50.0618 bits (118), Expect = 1.300e-113
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG F+G  VAA YHQYI + +AIKALGS ++NA
Sbjct:  254 WVGPFVGAAVAAIYHQYILRGSAIKALGSFRSNA 287

HSP 3 Score: 37.3502 bits (85), Expect = 1.300e-113
Identity = 13/19 (68.42%), Postives = 17/19 (89.47%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FG AVI+N +KAWD+QWI+
Sbjct:  235 FGPAVIFNNDKAWDDQWIY 253

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 3.130e-112
Identity = 187/238 (78.57%), Postives = 198/238 (83.19%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            M KD+E +        FSAKDY DPPPAPLID EEL KWS YRAVIAEFIA            IGYK Q+D  +NT    C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LY++AQCLGAICG G VK FQ SYY RYGGGANEL+DGY+KGTGLGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MAKDIEASAPEGGE--FSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARS 236

HSP 2 Score: 40.0466 bits (92), Expect = 3.130e-112
Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            G AVIYNK+KAWD+QWIF
Sbjct:  238 GTAVIYNKDKAWDDQWIF 255

HSP 3 Score: 39.6614 bits (91), Expect = 3.130e-112
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG  IG  +AA YHQY+ +A+A K LGS ++NA
Sbjct:  256 WVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSNA 288

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 2.002e-111
Identity = 177/220 (80.45%), Postives = 189/220 (85.91%), Query Frame = 3

Query:  180 FSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            FS KDY DPPP PL D  ELGKWSFYRA+IAEFIA            IGYKSQTDP LN DQC GVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL L RKV+L+RA++YMVAQCLGAICG   VKAFQ +Y+ RYGGGAN L+DGY+ GTG+ AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   12 FSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARS 231

HSP 2 Score: 45.0542 bits (105), Expect = 2.002e-111
Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQN 994
            WVG F G  +AAFYHQ++ +A AIKALGS ++
Sbjct:  251 WVGPFAGAAIAAFYHQFVLRAGAIKALGSFRS 282

HSP 3 Score: 38.5058 bits (88), Expect = 2.002e-111
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+KAWD  WIF
Sbjct:  233 GAAIIYNKDKAWDHHWIF 250

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 2.610e-111
Identity = 186/238 (78.15%), Postives = 197/238 (82.77%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            M KD+E +        FSAKDY DPPPAPLID EEL +WS YRAVIAEFIA            IGYK QTD + +     CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLY++AQCLGAICG G VK FQ +YY RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MAKDIEASGPEAGE--FSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 236

HSP 2 Score: 41.5874 bits (96), Expect = 2.610e-111
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAVIYNK+KAWD+QWIF
Sbjct:  238 GAAVIYNKDKAWDDQWIF 255

HSP 3 Score: 39.6614 bits (91), Expect = 2.610e-111
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG  IG  +AA YHQY+ +A+A K LGS ++NA
Sbjct:  256 WVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 288

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 2.176e-110
Identity = 182/222 (81.98%), Postives = 190/222 (85.59%), Query Frame = 3

Query:  180 FSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            FSAKDY DPPPAPLID +EL KWS YRAVIAEFIA            IGYK QTD   +     CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLY++AQCLGAICG G VK FQ +YY RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:   16 FSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 237

HSP 2 Score: 41.5874 bits (96), Expect = 2.176e-110
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAVIYNK+KAWD+QWIF
Sbjct:  239 GAAVIYNKDKAWDDQWIF 256

HSP 3 Score: 39.6614 bits (91), Expect = 2.176e-110
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG  IG  +AA YHQY+ +A+A K LGS ++NA
Sbjct:  257 WVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 289

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 6.831e-109
Identity = 172/218 (78.90%), Postives = 183/218 (83.94%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K QT P      C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL YM+AQCLGAICG GFVKAF K+ YN  GGGAN +ADGY+KGT LGAEIIGTFVLVYTVFSATDPKRSARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 226

HSP 2 Score: 49.6766 bits (117), Expect = 6.831e-109
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG F+G   AA YHQYI +A+AIKALGS ++NA
Sbjct:  245 WVGPFLGALAAAAYHQYILRASAIKALGSFRSNA 278

HSP 3 Score: 43.1282 bits (100), Expect = 6.831e-109
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FGAAVIYN EKAWD+QWIF
Sbjct:  226 FGAAVIYNNEKAWDDQWIF 244

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 1.013e-108
Identity = 185/238 (77.73%), Postives = 196/238 (82.35%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGKD EV         F+AKDY DPPPAPLID  ELG WS YRAVIAEFIA            IGYK QTD + +     CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RA+LY+VAQCLGAICG G VKAFQ +Y+NRYGGGAN LA GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MGKD-EVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 237

HSP 2 Score: 53.1434 bits (126), Expect = 1.013e-108
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 2

Query:  869 KKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            +K   N+   WVG F+G  +AAFYHQYI +A AIKALGS ++NA
Sbjct:  247 EKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 4.997e-108
Identity = 182/238 (76.47%), Postives = 197/238 (82.77%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGKD +V         F+AKDY DPPPAPLID  ELG WS YRAVIAEFIA            IGYK QTD + +     CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RALLY+VAQCLGAICG G VKAFQ +Y++RYGGGAN LA GY++GTGLGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS
Sbjct:    1 MGKD-DVIESGAGGGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARS 237

HSP 2 Score: 51.6026 bits (122), Expect = 4.997e-108
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            + KP  ++   WVG  +G  +AAFYHQYI +A AIKALGS ++NA
Sbjct:  246 KDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 1.890e-107
Identity = 185/237 (78.06%), Postives = 192/237 (81.01%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            M KDVE          F  +DY DPPPAP ID  EL KWSFYRAVIAEF+A            IGYK Q+D +     CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL RALLY++AQCLGAICG GFVKAFQ SYY RYGGGAN LADGY+ GTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:    1 MAKDVEAVPGEG----FQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 233

HSP 2 Score: 45.8246 bits (107), Expect = 1.890e-107
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            + KP  ++   WVG FIG  +AAFYHQ++ +A+  K+LGS ++ A
Sbjct:  241 KSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAA 285

The following BLAST results are available for this feature:

BLAST of DY262808 vs. ExPASy Swiss-Prot

BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153


Match Name	E-value	Identity	Description
PIP24_ARATH	7.030e-115	77.64	Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ...	[more]
PIP27_MAIZE	1.300e-113	76.89	Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1	[more]
PIP22_ORYSJ	3.130e-112	78.57	Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j...	[more]
PIP25_ARATH	2.002e-111	80.45	Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ...	[more]
PIP24_MAIZE	2.610e-111	78.15	Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1	[more]
PIP23_MAIZE	2.176e-110	81.98	Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1	[more]
PIP27_ARATH	6.831e-109	78.90	Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7...	[more]
PIP21_ORYSJ	1.013e-108	77.73	Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j...	[more]
PIP21_MAIZE	4.997e-108	76.47	Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2	[more]
PIP21_ARATH	1.890e-107	78.06	Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1...	[more]

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Properties


Property Name	Value
Genbank description	IC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA