DY262810

Overview
NameDY262810
Unique NameDY262810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1158
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY262810 vs. ExPASy Swiss-Prot
Match: NDUS6_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6 OS=Arabidopsis thaliana GN=At1g49140 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.281e-42
Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:    7 MGRKKATVEFDETAPD-FDPSDPYKDPVAMLEMREHIVREKWIDIEKAKIIREKLKWCYRIEGVNHMQKCRHLVNQYLESTRGIGWGKDGRHPSLHGPK 300
            MGRKK   EF+E+APD FDP +PYKDPVAM+EMREHIVREKWI IEKAKI+REK+KWCYR+EGVNH QKCRHLV QYL++TRG+GWGKD R  SLHGPK
Sbjct:    1 MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHGPK 99
The following BLAST results are available for this feature:
BLAST of DY262810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDUS6_ARATH5.281e-4278.79NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10AA12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262810 ID=DY262810; Name=DY262810; organism=Citrus clementina; type=EST; length=1158bp
CCGAAAATGGGAAGGAAGAAGGCAACGGTTGAGTTCGATGAAACGGCGCC
GGACTTCGATCCGTCGGACCCGTACAAGGACCCGGTGGCGATGCTGGAGA
TGAGAGAGCACATAGTGAGGGAGAAGTGGATCGACATCGAGAAGGCGAAG
ATCATAAGAGAGAAGCTCAAGTGGTGCTATCGCATCGAAGGAGTTAATCA
CATGCAGAAGTGCCGACACCTCGTTAACCAGTACCTCGAGTCCACTCGCG
GCATCGGCTGGGGCAAGGACGGCCGGCATCCCTCGCTTCACGGTCCGAAG
GTGGAGGCTGTGGAGTCTGAAGAATGATGATCTTTTTAAGGAATGAATAA
GGTCATTGCACTTGGCCATGTGGAGGAATGCCTAAAGTTTAGCAGTGGCT
GGGCCAGTTCATCTTCCAGTTTGCCTGTTGTTTTCTGTCTTGTGGTTACT
TATAACATTATTTATTTTCCTATCTTCTTATGTTAAAAATGGCGGCCAGA
TGATACTGGCATCTGCTTACATCTTAGATCTTTGCATTGGCATCTGAATA
TTGGTTGCAATTTGGACAGAGTAAAAAATGAAAAGTACATCAGATAATGT
TAATAAGCTTCTTGTCGTCACTTGGTTTTGTTCTCCATCAACAGATTCTA
AATTTTGTGCTCTGGTTGGTTATGCGCTAGGCTGATTTGACGGAGGAAAA
AGACGTCTTGGTATTCTGATACCCTCTGATTCCGGAAGGATGCTAGATTC
CTATTTTTTTTTTAATAGTTAATGACATTGTATTGAATGATTAGGTTATT
AAATTGTATGGCCTTGTTGGATGAGAAGAGAACACCCGTCGCTGCACAGT
GAAACCTATGGAATTTGTCAGGCTTGTTATGGATCTTTTGGTCATTTTTT
CTACAAATTTTGACCATTCATAGTAGCAATGGGGTTAGGACGTTTGAAAC
CTTTGCTCTATCAGTTTGCAAAATTTGGCTGTTTTTGGGAGTCTATATCA
CCTGACTAAATTGGGTCTTTTCAAAGGTAAACCTTTTCCCTTTAGGGTTG
GTATTCCTGGCCCGGGAGGGTCGATGGTAAGCTGGGTCTGAATTCTTTAA
AATTTCCGGGGAAAGTTAAAGAACGGGTTTTTTAAAAAGGCGGGGAGCCT
TTGTGGAA
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