DY262812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PR19B_ARATH (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana GN=PRP19B PE=1 SV=3) HSP 1 Score: 448.743 bits (1153), Expect = 3.511e-125 Identity = 228/292 (78.08%), Postives = 254/292 (86.99%), Query Frame = 3 Query: 174 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSRDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 MNC+ISGEVP EPVVS SGLLFE+RLIERHI DYGKCPVTGEPLT+DDIVPIKTG+I+KP+ L ASIPG+LG FQNEWDGLMLSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEAR LLA+ ER I PA AVT+NAALSNGKRA DE+LGP KKL GI+ II ELTDCNAALSQ+RKKRQ+P LA ID LER+TQL+SHPLHKT+KPGI S+DI +S+DVIATGGVD AVLFDRPSGQI++TL+GHSKK TSVKFV + DL+LT SADK V +W Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEARQLLAEVERHI-PAAPEAVTANAALSNGKRAAVDEELGPDAKKLCPGISAEIITELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PR19A_ARATH (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana GN=PRP19A PE=1 SV=1) HSP 1 Score: 446.047 bits (1146), Expect = 2.275e-124 Identity = 221/293 (75.43%), Postives = 254/293 (86.69%), Query Frame = 3 Query: 174 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIHYSRDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VWG 1049 MNC+ISGEVPEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP T+DDIVPIKTGKIVKP+PL ASIPG+LG FQ EWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE+R LLA++ERQ +PA TSNAALSNGKR +D + GP KK+ GI+ +I ELTDCNAALSQQRKKRQ+P LA +DALE++TQL+SHPLHKT+KPGI S+DI +S+DVIATGG+DT AVLFDRPSGQI++TL+GHSKK TS+KFV + DL+LT S+DK V +WG Sbjct: 1 MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDESRQLLAEAERQ-LPAAPEVATSNAALSNGKRGIDDGEQGPNAKKMRLGISAEVITELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWG 292
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 3.701e-58 Identity = 137/294 (46.60%), Postives = 178/294 (60.54%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASH-PLHKTSKPGIVSLDIHYS-RDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G A E DLG G+TP II +L D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I TGG D N V+FD+ S QI+ TL GH+KK TSV F DL+ + S D + +W Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIW 291
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.077e-57 Identity = 136/294 (46.26%), Postives = 178/294 (60.54%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASH-PLHKTSKPGIVSLDIHYS-RDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G A E DLG G+TP II +L D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I TGG D N V+FD+ S QI+ TL GH+KK TSV F +L+ + S D + +W Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIW 291
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 2.399e-57 Identity = 135/294 (45.92%), Postives = 178/294 (60.54%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASH-PLHKTSKPGIVSLDIHYS-RDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G A E DLG G+TP II +L D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I TGG D N V+FD+ + QI+ TL GH+KK TSV F +L+ + S D + +W Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIW 291
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 2.399e-57 Identity = 135/294 (45.92%), Postives = 178/294 (60.54%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASH-PLHKTSKPGIVSLDIHYS-RDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G A E DLG G+TP II +L D L+ +RKKR VP L + L +Y Q+ASH LH S PGI++LD+ S + I TGG D N V+FD+ + QI+ TL GH+KK TSV F +L+ + S D + +W Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGEL-----VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIW 291
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_CHICK (Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.232e-53 Identity = 132/295 (44.75%), Postives = 171/295 (57.97%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASH--PLHKTSKPGIVSLDIHYS-RDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 CSIS EVPE P VS S ++E+RLIE++I + G PV +PL+ + ++ IK ++PRP +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ N A E DLG G+TP II + D L+ +RKKR VP L ++ + LH S PGI++LD+ S + I TGG D N ++FD+ S QI+ TL GHSKK TSV F DL+ + S D + +W Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHPIRPRPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQ--PNVAGAGESMDLGEL-----AGMTPEIIQKPQDKATVLTTERKKRGKTVPEELVEARGAQQVPGRSPRMWGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIW 292
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_DICDI (Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum GN=prp19 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.319e-47 Identity = 112/290 (38.62%), Postives = 170/290 (58.62%), Query Frame = 3 Query: 174 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIH-YSRDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV 1040 M C+ISG EEPV+S +G ++EKRLIE++I GK P TGEPL + D++ +K GK VKPRP TA SIP ML +FQNEWD LML F L+QQ T RQEL+H++YQ+DAACRVIARL KERD ARS LA + R I+ + +N +N K P+ + + + I + + + L + RK+R +LA DA++++ A + + I SL+++ ++IA GG++ N ++ R + ++ T + G S + + I++ +D ++ Sbjct: 1 MICAISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGKEPTTGEPLGLSDLITVKIGKTVKPRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVKERDAARSALANA-RNIVQQQQQQTNNNNNNNNNKDVEMSSASTPSSSEDNL-LDSTIYKRIAEKSEELIKTRKER-THQSLAEPDAIKQFKVSA----NVETDCQIKSLEVNSQDNNLIAMGGINGNVYVYSRETNELCTAIKGTSSAPINKVLFAPNNTIVSAGSDAVI 283
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: PRP19_CAEEL (Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 3.839e-47 Identity = 117/294 (39.80%), Postives = 172/294 (58.50%), Query Frame = 3 Query: 180 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK-PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERYTQLASHP-LHKTSKPGIVSLDIHYSRDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKGTSVKFVTEGDLILTGSADKMV-VW 1046 C ISGE+ E+PVVS+ SG +F++RLI + I + G P++ L+ D +V +K+G PR ++ SIP +L M Q+EWD +ML++F+L QQL ARQELSH+LYQHDAACRVI+RL KE AR L+ + P S V + ++ E ED G++ AI+A+L + + +L+ +RK+R +P LA + L Q ASH +H T PGI +LDI ++ TGG+D VL+D Q++ T GH+KK +V + ++ SAD + VW Sbjct: 5 CGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAAREALS----TLKPHTSAKVDDDVSID------ESED--------QQGLSEAILAKLEEKSKSLTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDI--KGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVW 278
BLAST of DY262812 vs. ExPASy Swiss-Prot
Match: CWF8_SCHPO (Cell cycle control protein cwf8 OS=Schizosaccharomyces pombe GN=cwf8 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.402e-35 Identity = 85/212 (40.09%), Postives = 123/212 (58.02%), Query Frame = 3 Query: 174 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQ 809 M CSISGE P+EPV+S+ SG ++EKRLIE+ I + K PVT + T++D+VP+K V+PRP +A S+P +L +FQ EWD + L F L + L +QELS ALY DAA RVI+RL KERDEAR LA+ I S + ++ ++G + +L T + + + LS +RK+ ++ P A DA+ + Q Sbjct: 1 MFCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSSKTI-----------EVQEVEMGESDDQLKTSLRSTVEKTFQE----LSSKRKRTKLQPKWATDDAVSQLLQ 197 The following BLAST results are available for this feature:
BLAST of DY262812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262812 ID=DY262812; Name=DY262812; organism=Citrus clementina; type=EST; length=1328bpback to top |