DY262820

Overview
NameDY262820
Unique NameDY262820
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1268
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.976e-45
Identity = 108/249 (43.37%), Postives = 142/249 (57.03%), Query Frame = 2
Query:  338 ASDTEENERP-----KRQKLEAYPTSFSRDWENALENGVS-----DEGEMRDQQQTKVENGRSKRKDVVXXXXXXXXXXXXXXXXXXNSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGTDVAGCRGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            AS TEE ++      KR K E Y      D+ N   +  S     +E    +     + +G S   DV                   +  P+YGV+SVCGRRRDMEDAVA+HPSF R+  E +    HYFGVYDGHGCSHVA RC+ERLHELV+EE  S+K  +    +  +ERSFTRM++EV  + E V+ A CRCELQTP+CDA GSTAVV+++ PE  ++ N        C    + + LS+D+KP
Sbjct:   42 ASTTEEEDKSEGIYNKRNKQEEY------DFMNCASSSPSQSSPEEESVSLEDSDVSISDGNSSVNDVAVIPSKKTVKET-------DLRPRYGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHELVQEEALSDKKEE---WKKMMERSFTRMDKEVVRWGETVMSANCRCELQTPDCDAVGSTAVVSVITPEKIIVANCGDSRAVLCR-NGKAVPLSTDHKP 273          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.731e-41
Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 2
Query:  572 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGTDVAGCRGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            S+P+YGVSSVCGRRR+MEDAVA+HPSF   + + ++   HYFGVYDGHGCSHVA RCRERLH+LV+EEL S+   D    +  +ERSFTRM++EV  + + VV A C+C+LQTP CD+ GSTAVV+++ P+  V+ N        C    + + LS+D+KP
Sbjct:   74 SSPRYGVSSVCGRRREMEDAVAIHPSF--SSPKNSEFPQHYFGVYDGHGCSHVAARCRERLHKLVQEELSSDM-EDEEEWKTTMERSFTRMDKEVVSWGDSVVTANCKCDLQTPACDSVGSTAVVSVITPDKIVVANCGDSRAVLCR-NGKPVPLSTDHKP 230          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.499e-40
Identity = 88/159 (55.35%), Postives = 107/159 (67.30%), Query Frame = 2
Query:  578 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGTDVAGCRGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            PKYGV+SVCGRRR+MEDAVAVHP F R   E +    HY GVYDGHGCSHVAM+CRERLHELV+EE E++     A    ++ RSFTRM+ EV   N     A CRCELQ P+CDA GSTAVV+++ PE  ++ N        C    + + LSSD+KP
Sbjct:  110 PKYGVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHELVREEFEAD-----ADWEKSMARSFTRMDMEVVALNADGA-AKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANCGDSRAVLCR-NGKAIALSSDHKP 261          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.495e-34
Identity = 79/170 (46.47%), Postives = 112/170 (65.88%), Query Frame = 2
Query:  578 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELE---SNKGTDVAGCRGALERSFTRMEQEVNEFN--------ERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            PK G +SVCGRRRDMEDAV++HPSF ++N E      H++GV+DGHGCSHVA +CRERLH++VK+E+E   S++ T+       + +SF +M++EV++           R +K +CRCELQ+P+CDA GSTAVV++V PE  ++ N        C      + LS D+KP
Sbjct:  103 PKIGTTSVCGRRRDMEDAVSIHPSFLQRNSENH----HFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTE------TMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCGDSRAVLCR-NGVAIPLSVDHKP 261          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.680e-28
Identity = 73/164 (44.51%), Postives = 97/164 (59.15%), Query Frame = 2
Query:  581 KYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGT----DVAGCRGALERSFTRMEQEVNEFNERVV--KATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            +YG +SVCGRRRDMED+V+  P F   +        H+FGV+DGHGCSHVA  C +R+HE+V +E  +  G+    + A  RG +ERSF RM+ E    +   V    TCRCE+Q P+CD  GSTAVVA++ P   V+ N        C   A  + LS D+KP
Sbjct:   77 RYGFTSVCGRRRDMEDSVSACPGFLPGH--------HFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAGSAGLDEEARWRGVMERSFARMDAEAVASSRGSVAPAPTCRCEMQLPKCDHVGSTAVVAVLGPRHVVVANCGDSRAVLCRGGA-AIPLSCDHKP 231          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.194e-28
Identity = 67/138 (48.55%), Postives = 90/138 (65.22%), Query Frame = 2
Query:  578 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGTDVAGCRGALERSFTRMEQEV-NEFNERV-VKATCRCELQTP-ECDAGGSTAVVAIVNPE*KVIGN 982
            P+YGV++VCGRRR+MEDAV++ P F       A  + H++GV+DGHGCSHVA  C++R+HE+V EE       +VA  R  +E+SF RM+ EV N  + R   +  C CE QTP   D  GSTAVVA+V+P   V+ N
Sbjct:   98 PRYGVTAVCGRRREMEDAVSIRPDFL-----PASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHNKGASGEVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAGSTAVVAVVSPTQVVVAN 230          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.138e-27
Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  578 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEEL-ESNKGTDVAGC----RGALERSFTRMEQEVNEFNERVV--KATCRCELQTP-ECDAGGSTAVVAIVNPE*KVIGN 982
            P+YGV+SV GRRR+MEDAV++ P F R +  T+  + H+FGV+DGHGCSHVA  C++R+HELV +   ++  G + A      +  +E+ F RM+ E   + +     +  CRCELQTP  CD  GSTAVVA+V P   V+ N
Sbjct:   90 PRYGVTSVFGRRREMEDAVSIRPDFLRGS--TSSGKHHFFGVFDGHGCSHVARMCQDRMHELVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTAVVAVVGPNRVVVAN 230          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.279e-24
Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 2
Query:  581 KYGVSSVCGRRRDMEDAVAVHPSFFRQ-NFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNK----GTDVAGCRGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            ++G +SV GRRR+MEDAV++  +F    N E A     ++GV+DGHGCSHVA  CRER+HELV EE+ +        + A     +ERSF RM+ EV     R    +CRCE Q  +CD  GSTAVVA+V     V+ N        C   A  ++LSSD+KP
Sbjct:   74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVAEEMGAGSPAAAAREPASWTETMERSFARMDAEVIA-GCRAESGSCRCEGQ--KCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAP-VQLSSDHKP 232          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.882e-17
Identity = 59/175 (33.71%), Postives = 83/175 (47.43%), Query Frame = 2
Query:  578 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADDELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNKGTDVAGC---------RGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDA-------GGSTAVVAIVNPE*KVIGNWR*LENPFCG*TARLLRLSSDYKP 1054
            P YG+ SV GR R MED+V V P+  +         +H+F VYDGHG S V+  C   +H  VKEELE N   +  G          RG ++RSF RM++        +  +TC C    P C+         GSTAV A++  +  ++ N        C      + LS+D+KP
Sbjct:  107 PLYGIVSVMGRSRKMEDSVTVKPNLCKPEVNR-QRPVHFFAVYDGHGGSQVSTLCSTTMHTFVKEELEQNLEEEEEGSENDVVERKWRGVMKRSFKRMDE--------MATSTCVCGTSVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCR-NGMAIPLSNDHKP 271          
BLAST of DY262820 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.631e-15
Identity = 64/175 (36.57%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  572 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETADD-------ELHYFGVYDGHGCSHVAMRCRERLHELVKEELESNK------GTDVAGCRGALERSFTRMEQEVNEFNERVVKATCRCELQTPECDAGGSTAVVAIVNPE*KVIGNWR*LENPFC-G*TARLLRLSSDYKP 1054
            S P YG +S+CGRR +MEDAV+  P F + +  +  D         H+FGVYDGHG S VA  CRER+H  + EE+   K       T +   + AL  SF R++ E+       V                GST+VVA+V P    + N        C G TA  L LS D+KP
Sbjct:  125 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV----------------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKTA--LPLSVDHKP 281          
The following BLAST results are available for this feature:
BLAST of DY262820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
P2C03_ARATH1.976e-4543.37Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C24_ARATH1.731e-4154.04Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C78_ARATH2.499e-4055.35Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C37_ARATH3.495e-3446.47Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C30_ORYSJ1.680e-2844.51Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C09_ORYSJ2.194e-2848.55Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C49_ORYSJ4.138e-2746.15Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C68_ORYSJ3.279e-2444.17Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C75_ARATH3.882e-1733.71Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C56_ARATH1.631e-1536.57Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AB11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262820 ID=DY262820; Name=DY262820; organism=Citrus clementina; type=EST; length=1268bp
TCAAACCCCATGGATTCTCTTTTCAAGACTCCTCTTGAGCGCGCAAACAT
TCTCTTTCACCCGTTCCATTTTCATTTTCTCATGTCGATCAATAATATAG
CGTGATTCATTAAAAAACGAAACCATTTTTGCTAACAAATTAAGCTCGCA
AGACAAGACATAACGAGAATCTTGAATTTCGTTACGAACTTCCTTGACAT
TAAAGAGTGTGATGGCGGAGATCTGCTGTGGAGTGGTGAGCGAGAGTGAG
GCAACGACGTCGTGCGAGACAAGCTCGCGTACGGCAAGGCGTAGGCGAAT
GGAGATCAGACGGTTCAAGTTCGTTACGGGCGTGGTCGCCTCGGATACTG
AGGAAAATGAGAGACCAAAACGGCAGAAGCTAGAGGCTTATCCGACGTCG
TTTTCTCGTGACTGGGAAAACGCGCTGGAGAACGGCGTTTCAGACGAAGG
CGAAATGCGAGATCAACAACAGACGAAGGTAGAAAATGGACGATCGAAAA
GAAAAGATGTGGTTTTACCGAGTGAGTCTTTGAGCACGTTACCCTTAACA
ACTGCTTCACTGGATCCAAACTCGAATCCTAAATACGGCGTCTCTTCTGT
TTGTGGAAGAAGAAGAGACATGGAAGATGCAGTAGCTGTTCATCCGTCGT
TTTTTCGCCAAAATTTCGAAACTGCTGATGATGAATTGCACTACTTCGGC
GTTTACGATGGCCACGGCTGCTCTCATGTGGCGATGAGATGTAGGGAAAG
GTTGCATGAGTTGGTGAAGGAAGAACTGGAGAGTAACAAGGGAACGGATG
TAGCGGGATGTAGAGGGGCGTTGGAGCGAAGCTTCACGCGTATGGAACAG
GAGGTGAATGAGTTTAACGAAAGAGTGGTGAAAGCCACCTGTAGGTGTGA
GCTTCAAACGCCTGAATGCGATGCCGGTGGGTCTACTGCTGTTGTCGCCA
TAGTAAACCCCGAATAAAAAGTGATTGGCAACTGGCGGTGACTCGAAAAC
CCTTTTTGTGGCTAAACCGCAAGGCTCCTACGTTTGTCGTCTGATTACAA
ACCCGGAACGAACGGAACAAATTAACCGGAATCCCAAAAACCGGGAGGGA
AGGGAAACCTAATGGGAAAGGGGCCGCGGGGTCCCTTGGGGGTTTTGGGC
CATTTTCCAAAAGAAGAAAGGGAAAAAAAACCCTTTAAAACCCCTATAAT
TTCAATTTTTAAAAACCACAGAGGAGGAAAAGCTGTGCGGGGAAATTTTG
CAACGGGGCCCGGGCGGA
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