DY262869

Overview
NameDY262869
Unique NameDY262869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1324
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262869 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.984e-11
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 1 
Query:  205 NQINIHADA----DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL 426
            N I +H  A    D  ++V LHGFPE WY W++Q+  +  AG+R IAPD RGY LSD P   +      + DD++ ++
Sbjct:   12 NGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLI 89
[Close]
BLAST of DY262869 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.591e-11
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 
Query:  244 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAK 447
            V   HGFPE W+SWR+Q+  +A AGFR +A D +GYG S  P E E+ S + +  D++  L+ LGL++
Sbjct:  261 VCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQ 328
[Close]
BLAST of DY262869 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 5.772e-11
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1 
Query:  244 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAK 447
            V   HGFPE WYSWR+Q+  +A AG+R +A D +GYG S  P E E+   + +  +++  LD LGL++
Sbjct:  261 VCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQ 328
[Close]
BLAST of DY262869 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.845e-11
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1 
Query:  241 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVTI 456
            +++ LHGFPE WYSWRHQ+    +  +R +A D RGYG SD PA  E      ++ D+  ILD LG +K  +
Sbjct:   93 LMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVL 163
The following BLAST results are available for this feature:
BLAST of DY262869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YFHM_BACSU1.984e-1141.03AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
HYES_PIG2.591e-1145.59Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_HUMAN5.772e-1144.12Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
EPHX4_MOUSE9.845e-1144.44Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10AG04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262869 ID=DY262869; Name=DY262869; organism=Citrus clementina; type=EST; length=1324bp
ATCGGGTAGCTAAAAACACAGAAACATTAACTGCTTGCGGAAAAATGGAT
CAAATTGAGCACAAGTTCATCAAAGTACAAGGCCTGAACCTTCACATCGC
CGAGGCCGGAGCAGGTTTTTCAGTCATCACTTTATCATGCACCCAGGCTG
CCGCTACCTGACAATATCTATATATATATATATATACACACACACACAAT
TCTTAATCAAATTAACATCCATGCAGATGCAGATGCACATGTGGTGGTGT
TCTTGCATGGATTCCCTGAGATATGGTACTCGTGGCGGCATCAGATGGTG
GGTGTGGCCACTGCTGGCTTCAGGGCCATTGCTCCTGATTGCAGAGGGTA
CGGCCTCTCCGACCCACCTGCTGAACCTGAAAAAACCTCTTTTCAGGACA
TGGTAGATGATCTCCTCGCCATTTTGGATCATCTCGGACTAGCTAAGGTT
ACTATATATCTTTCCCAGCTAGCCTCTATGTTCAATATTAGGATATGTTT
CATTACTAATTTCAATAGTTTATACGTTTGATTGAAAAGTGAAAACAGTA
GTTTAGTTGGTTCAACTGGCAATTGCTCTTGGAGCGTTACAAAAGAAAGG
TCTGAGGTTCTAATCTCCTTCACATTGGGGTAGGATTTTTCATATTTTGT
AGTTTTTTCATTTCCAGGTGCCCTTTAGTAAAAACTATATAGCTACTATA
GAAGAGGGAGAGGGAGAGGGAGAGGGAGATATATATATACATATGCCTAC
CTTTGTGGTAGAACCATATATTGATGCTTCAGGCCTAATGATTTTGGCTC
TCTACATATATTGTATAGGTTTTTCTTGTTGCAAAAGATTTTGGAGCTCT
GACTGCATACATGTTTGCAATTCAACACCAAGAGAGGGTCTCTGGGGTAA
TTACCTTGGGAGTGCCATTTTTACTCCTGGTCGATTGAATTCACAAATAC
CTTCCTGAAAGTTTTACATATCCAGATGGCAGGTGTAAATATATGGCGGC
TTGCACCTTCTTGCTAATAATTAAGAATAATTAATGTGACTCTTTAATTA
ATCGGCTTTGAAAATTGAAGCTCTTCTTATTAGGAACCTGGACAAGCAGA
AACTAAATTTGGCCCGCCTGGAGGCAAAAACAGGTGGAAAGAAAATTTAA
AAAACCCCTCTCCCAAAGGAAAAAAACCCAAAACCCTCCGAAAAAAAAAA
AAAATTTAAGAAATTTTTGGGAAGTAATATACAACTCCCCCCCCCCCCCC
CTGTTTTTCTTGGGGGAGGAAGAAAAATCCCCACCCCACTTTTAGGAGGC
GCCCCCTCGTGTTAGGGAAGAAAA
back to top