DY262904

Overview
NameDY262904
Unique NameDY262904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1361
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 524.242 bits (1349), Expect = 1.900e-148
Identity = 270/342 (78.95%), Postives = 294/342 (85.96%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSNFGATD-VYGLSATSRGPTPRPSNYEDEANNANQS---------RFH------------HYPGTNPGMFS 959
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFI++N+PY MNLRF+AAD+LQK+IVL +L +W KLS+ G L+WTITLFS+STLPNTLVMGIPLLKGMYG FSG LMVQIVVLQCIIWYTLMLF+FEYRGA+LLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLET+AEIKEDGKLHVTVR+SNASRSDI+SRRSQGLS+ TPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSMMA  GGR+SNFG  + V+G    S+GPTPRPSNYE++   A  +         RFH            HYP  NPGMFS
Sbjct:    1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPLLKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSA-TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMASGGGRNSNFGPGEAVFG----SKGPTPRPSNYEEDGGPAKPTAAGTAAGAGRFHYQSGGSGGGGGAHYPAPNPGMFS 337          

HSP 2 Score: 24.6386 bits (52), Expect = 1.900e-148
Identity = 17/31 (54.84%), Postives = 18/31 (58.06%), Query Frame = 2
Query: 1031 GKRWCWNLSLDLGSFKVVWNSSAFPVPKVFG 1123
            GKR   N   DL  F  VW+SSA PV  VFG
Sbjct:  357 GKRQDGN-GRDLHMF--VWSSSASPVSDVFG 384          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1)

HSP 1 Score: 509.99 bits (1312), Expect = 1.327e-143
Identity = 255/319 (79.94%), Postives = 285/319 (89.34%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQP-LETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANNANQ--SRFHHYPGTNPGM 953
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK+IVL +L +WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTAG+I SI VD+D++SLDGR+  +ET+AE+KEDGK+HVTVR+SNASRSD++SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+  GRSSNF A D +G+     G TPRPSNYE++A   N+  S++  YP  NP M
Sbjct:    1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDADVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSSNFAAGDAFGVRT---GATPRPSNYEEDAAAPNKAGSKYGQYPAPNPAM 314          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 501.901 bits (1291), Expect = 5.170e-143
Identity = 253/327 (77.37%), Postives = 280/327 (85.63%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQ-PLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANNAN--------QSRFHHYPGTNPGMFS 959
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK++VL +L  WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTA +I SI VD D++SLDGR+  +ET+ E+KEDG++HVTVR+SNASRSDI+SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+  GRSSNFGA D +G+     G TPRPSNYED+A+                HYP  NP + S
Sbjct:    1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIVVDPDVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSSNFGAADAFGVRT---GATPRPSNYEDDASKPKYPLPASNAAPMAGHYPAPNPAVSS 322          

HSP 2 Score: 28.8758 bits (63), Expect = 5.170e-143
Identity = 22/44 (50.00%), Postives = 24/44 (54.55%), Query Frame = 2
Query:  992 ANKKAINGQAHQKGKRWCWNLSLDLGSFKVVWNSSAFPVPKVFG 1123
            A K A NGQA  KG+        DL  F  VW+SSA PV  VFG
Sbjct:  327 AKKAATNGQA--KGE--------DLHMF--VWSSSASPVSDVFG 358          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2)

HSP 1 Score: 444.121 bits (1141), Expect = 8.942e-124
Identity = 222/319 (69.59%), Postives = 262/319 (82.13%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANNANQSRFHHYPGTNPGMF 956
            MIT  D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFISSN+PY MNLRFIAADTLQK+I+L +L IW+  ++ G LEW+IT+FS+STLPNTLVMGIPLL  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FEYRGA++LI EQFP+T  SIVS  V+SD++SLDG   LETDA+I +DGKLHVTVRKSNASR   +     G ++ TPRPSNLT AEIYSL    N TPRGS+FNH+DFYSMM   GGR SNFG  D+Y +  +SRGPTPRPSN+E+    A+  RF +YPG  PG +
Sbjct:    1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFY---GGGGTNMTPRPSNLTGAEIYSL----NTTPRGSNFNHSDFYSMMGFPGGRLSNFGPADMYSVQ-SSRGPTPRPSNFEESCAMASSPRFGYYPGGAPGSY 311          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1)

HSP 1 Score: 434.106 bits (1115), Expect = 9.254e-121
Identity = 219/319 (68.65%), Postives = 261/319 (81.82%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANNANQSRFHHYPGTNPGMF 956
            MI+  D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+N+PY MNLRFIAADTLQKII+L +L +W+  ++ G LEW+IT+FS+STLPNTLVMGIPLL  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FE+RGA++LI EQFP+TA SIVS  V+SD++SLDG   LETDAEI +DGKLHVTVRKSNA      SRRS    + TPRPSNLT AEIYSL +    TPRGS+FNH+DFY+MM   GGR SNFG  D+Y +  +SRGPTPRPSN+E+    A+  RF +YPG   G +
Sbjct:    1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAASIVSFKVESDVVSLDGHDFLETDAEIGDDGKLHVTVRKSNA------SRRSFCGPNMTPRPSNLTGAEIYSLST----TPRGSNFNHSDFYNMMGFPGGRLSNFGPADMYSVQ-SSRGPTPRPSNFEENCAMASSPRFGYYPGGGAGSY 308          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 5.078e-119
Identity = 222/327 (67.89%), Postives = 258/327 (78.90%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANNANQSRFHH-----------YPGTNP 947
            MIT  D Y V+TA+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AADTLQKII+LV+LA+W+ L+K G LEW IT+FS+STLPNTLVMGIPLL  MYG ++GSLMVQ+VVLQCIIWYTL+LF+FEYRGA+LLI EQFP+T  SIVS  V+SD++SLDG   LETDAEI  DGKLHVTVRKSNASR  +           TPRPSNLT AEIYSL S    TPRGS+FNH+DFYS+M   GGR SNFG  D+Y +  +SRGPTPRPSN+E+  NNA +  F++           YP  NP
Sbjct:    1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRSLM---------MTPRPSNLTGAEIYSLSS----TPRGSNFNHSDFYSVMGFPGGRLSNFGPADLYSVQ-SSRGPTPRPSNFEE--NNAVKYGFYNNTNSSVPAAGSYPAPNP 311          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 4.163e-113
Identity = 209/310 (67.42%), Postives = 251/310 (80.97%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKL-SKRGC--LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGG---------RSSNFGATDVYGLSATSRGPTPRPSNYEDEA 899
            MI+  DFY VM A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MNLRF+AADTLQK++VL  LA WS+L S+ G   L+W+ITLFS+STLPNTLVMGIPLL  MYG +SGSLMVQIVVLQCIIWYTLMLF+FE+R AR+LI++QFPDTA SIVS+HVD D++SL+G    ET+AE+  DG+LHVTVR+S+ SR  +           TPRPSNLT AEIYSL SSRNPTPRGS+FNHADF++M+ GG         R S+FGA+++Y L  +SRGPTPR SN+++ +
Sbjct:    1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHVDPDVVSLEGGH-AETEAEVAADGRLHVTVRRSSVSRRSLL---------VTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGASELYSLQ-SSRGPTPRQSNFDEHS 299          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 403.675 bits (1036), Expect = 1.339e-111
Identity = 208/316 (65.82%), Postives = 248/316 (78.48%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFS---RRSQGLSST--TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAG--------GRSSNFGAT------DVYGLSATSRGPTPRPSNYEDE 896
            MIT  D Y V+ AMVPLYVAMILAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFISSNDPY MN  F+AAD+LQK+++L  L +W   S+RG LEW ITLFS+STLPNTLVMGIPLL+ MYG+FSG+LMVQIVVLQ IIWYTLMLF+FE+RGA+LLISEQFP+TAGSI S  VDSD++SL+GR+PL+TDAEI +DGKLHV VR+S+A+ S I S       GL+S+  TPR SNLT  EIYS+QSSR PTPR SSFN  DFY+M           G ++++G        DVY L  +S+G TPR SN+++E
Sbjct:    1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSDVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPRHGYTNSYGGAGAGPGGDVYSLQ-SSKGVTPRTSNFDEE 315          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 5.450e-105
Identity = 194/281 (69.04%), Postives = 231/281 (82.21%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEF----SGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSL----DGRQPLETDAEIKEDGKLHVTVRKSNASRSD-IFSRRSQGLS-STTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSN 818
            MIT+ D YHV+TA+VPLYVAM LAY SV+WW+IF+PDQCSGINRFVALFAVPLLSFHFIS+N+P+ MNLRF+AADTLQK+IVL +LA+W +LS RG L+W ITLFS+STLPNTLVMGIPLLKGMY       SGSLMVQIVVLQCIIWYTLMLF+FEYRGARLL+ EQFPDTA SIVS  VDSD++SL     G   L+ +AE+ +DG++ VTVRKS +SRS+   S  +Q  S S  PR SNL+  EIYSLQSSRNPTPRGSSFNHA+F++++  G+  +
Sbjct:    1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFISTNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPLLKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIVSFRVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQPRVSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGKQGD 281          
BLAST of DY262904 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 2.143e-101
Identity = 200/358 (55.87%), Postives = 245/358 (68.44%), Query Frame = 3
Query:    6 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKR--------GCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQF-PDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKS----------NASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSNFGATDVYGLSATSRGPTPRPSNYEDEANN----ANQSRFHHYPGTNPGMFSQLIIILKLMPVPIKRLL 1010
            MIT  D Y V+ A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AAD+LQK+++L  LA+W  L  R          L+WTITLFS+STLPNTLVMGIPLL+ MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRGA+ LISEQF PD   SI S  VDSD++SL+GR+ L+ DAE+  DG++HV +R+S           A+RS + SR     ++ TPR SNLT  EIYSLQ+SR PTPR SSFN ADFY+M +G + ++  A+ +    A   G   R    +++  N       +    YP  NPGM          MP P K+ L
Sbjct:    1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISTNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGASIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGV-SRAYGASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPM----AQHGGAGGRAQGLDEQVTNKFASGKAADPPSYPAPNPGM----------MPAPRKKEL 343          
The following BLAST results are available for this feature:
BLAST of DY262904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PINI_ARATH1.900e-14878.95Auxin efflux carrier component 1 OS=Arabidopsis th... [more]
PIN1C_ORYSJ1.327e-14379.94Probable auxin efflux carrier component 1c OS=Oryz... [more]
PIN1_ORYSJ5.170e-14377.37Auxin efflux carrier component 1 OS=Oryza sativa s... [more]
PIN7_ARATH8.942e-12469.59Auxin efflux carrier component 7 OS=Arabidopsis th... [more]
PIN3_ARATH9.254e-12168.65Auxin efflux carrier component 3 OS=Arabidopsis th... [more]
PIN4_ARATH5.078e-11967.89Auxin efflux carrier component 4 OS=Arabidopsis th... [more]
PIN3A_ORYSJ4.163e-11367.42Probable auxin efflux carrier component 3a OS=Oryz... [more]
PIN2_ARATH1.339e-11165.82Auxin efflux carrier component 2 OS=Arabidopsis th... [more]
PIN1B_ORYSJ5.450e-10569.04Probable auxin efflux carrier component 1b OS=Oryz... [more]
PIN2_ORYSJ2.143e-10155.87Probable auxin efflux carrier component 2 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BB05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262904 ID=DY262904; Name=DY262904; organism=Citrus clementina; type=EST; length=1361bp
CAAAGATGATCACACTCGCAGACTTTTACCATGTCATGACTGCAATGGTT
CCACTTTATGTGGCCATGATCTTAGCTTATGGGTCAGTGAAATGGTGGAA
GATTTTCACTCCTGATCAGTGCTCAGGCATCAACCGTTTTGTTGCTCTCT
TTGCAGTCCCCTTGCTCTCTTTCCATTTCATCTCATCCAACGACCCTTAC
AAAATGAACTTGAGGTTCATTGCAGCTGATACTCTTCAAAAAATCATAGT
CCTTGTGGTTCTAGCAATTTGGAGCAAGTTGAGCAAAAGGGGTTGTTTAG
AATGGACCATCACTCTATTTTCAGTATCAACTTTACCAAACACTCTAGTC
ATGGGCATTCCTTTACTCAAAGGAATGTACGGCGAGTTCTCTGGAAGCTT
GATGGTGCAAATAGTTGTTCTTCAATGCATCATTTGGTACACTTTGATGT
TATTCATGTTTGAATATAGAGGTGCCAGGTTGCTTATCTCTGAGCAATTC
CCAGACACTGCTGGCTCTATTGTCTCAATACATGTTGATTCTGACATCAT
GTCACTTGATGGAAGGCAGCCACTTGAAACAGACGCTGAGATCAAAGAAG
ATGGAAAGCTTCATGTCACTGTCCGAAAATCAAATGCCTCAAGATCAGAC
ATTTTCTCAAGAAGGTCTCAAGGGCTGTCGTCAACAACTCCACGCCCATC
AAACTTAACGAATGCAGAGATTTACTCTTTGCAGTCATCAAGAAACCCAA
CACCACGAGGGTCAAGCTTTAACCACGCTGACTTTTACTCAATGATGGCC
GGTGGCCGCAGTTCAAACTTCGGCGCCACTGACGTGTATGGTCTCTCGGC
GACGTCGCGTGGACCCACCCCAAGACCATCTAACTATGAAGATGAAGCTA
ATAATGCTAACCAGTCAAGATTCCATCACTACCCGGGCACAAATCCGGGC
ATGTTTTCTCAACTAATAATAATACTAAAGTTAATGCCAGTGCCAATAAA
AAGGCTATTAATGGTCAAGCTCACCAAAAAGGAAAAAGATGGTGCTGGAA
CTTGAGCTTGGACCTAGGATCCTTCAAGGTTGTTTGGAATTCGAGTGCTT
TCCCTGTTCCTAAAGTATTTGGTTGCCCTGAAAAAAAAAAAAAAACCCCA
AAAAATGGAAAATGGGTGGGTCCCCCCAAGGGGGAAAAAGAGAAAGGGGG
GGGGGGGGGGCCGTAAAAAAAAATGGGAAAAAAAAAAATTTTATTCTTTT
GTAAAAAAAAAAAGAAGTGGGAGAAGAAAACAACAAAATAGGAAAAAAAA
AATATTGGGTAAGAGAAAAAACCACAAAAAAGATTTCCTCCCCCCCACCA
AAAAAAGAAGA
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