DY262912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.163e-30 Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G ++A+D +V NL S A+ I++ E+IA GT +ANGDR IGELIAKA E + + D KT + EL++ GM +DRGY+SPYFITN KT++C L DP I+I EKK+SN Sbjct: 146 DLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISN 260 HSP 2 Score: 41.2022 bits (95), Expect = 2.163e-30 Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGIGQNPVMESHEQEKILNANLLAMLKKYGNQRIKRVTL 1134 E+D LA+L+LN++ K C K GFGE++KANL + + +E +N + + L +GN K+VT+ Sbjct: 286 ESDALATLILNKLRANIKVCAVKAPGFGENRKANLHDLAALTGAQVITEELGMNLDNID-LSMFGN--CKKVTV 356
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.817e-30 Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G MA+DA+V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + + D KT + EL++ GM LDRGY SPYFITN KT++C L DP I+I EKK+S+ Sbjct: 145 DLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFN-ELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISS 259 HSP 2 Score: 41.2022 bits (95), Expect = 2.817e-30 Identity = 18/38 (47.37%), Postives = 26/38 (68.42%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGI 1026 E+D LA+L+LN++ K C K GFGE++KANL + Sbjct: 285 ESDALATLILNKLRAGIKVCAIKAPGFGENRKANLQDL 322
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 2.327e-29 Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN KT++C L DP I+I +KKV+N Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTN 262 HSP 2 Score: 37.7354 bits (86), Expect = 2.327e-29 Identity = 15/38 (39.47%), Postives = 25/38 (65.79%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGI 1026 E++ L +L++N++ K C K GFGE++KANL + Sbjct: 288 ESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQDL 325
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.327e-29 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+ Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISS 260 HSP 2 Score: 37.3502 bits (85), Expect = 2.327e-29 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGI 1026 E++ LA+L+LN++ K C K GFGE++KA L + Sbjct: 286 ESEALATLILNKLRAGIKVCAIKAPGFGENRKAGLQDL 323
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.944e-29 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+ Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISS 260 HSP 2 Score: 38.5058 bits (88), Expect = 3.944e-29 Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANL 1017 E+D LA+L+LN++ K C K GFGE++KA L Sbjct: 286 ESDALATLILNKLRAGIKVCAIKAPGFGENRKAGL 320
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 8.704e-29 Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN K ++C L DP I+I +KKV+N Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTN 262 HSP 2 Score: 37.7354 bits (86), Expect = 8.704e-29 Identity = 15/38 (39.47%), Postives = 25/38 (65.79%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGI 1026 E++ L +L++N++ K C K GFGE++KANL + Sbjct: 288 ESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQDL 325
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.152e-24 Identity = 55/118 (46.61%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIA--KAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 D R+G ++A+D +V L S A+ I++ E+IA GT +ANGDR EL+ KA E + + D KT + EL++ GM +DRGY+SPYFITN K ++C L DP I+I EKK+SN Sbjct: 149 DLRRGIKLAVDTVVTKLKSRARMISTSEEIAQVGTISANGDR---ELVTDCKAMESVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNQKNQKCELEDPLILIHEKKISN 262 HSP 2 Score: 40.817 bits (94), Expect = 1.152e-24 Identity = 25/86 (29.07%), Postives = 41/86 (47.67%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGIGQNPVMESHEQEKILNANL--LAMLKKYGNQRIKRVTLLLKGWQRNEK 1164 E+D LA L+LN++ K C K GFGE++KAN+ + + +E +N L+ML + + + GW +K Sbjct: 288 ESDALAVLILNKLRAGIKVCAVKAPGFGENRKANMHDLATLTGAQVITEELGMNLEKIDLSMLGNCKKITVSKDDTVFLGWGAGDK 373
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 7.284e-24 Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 477 VPDQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSN 830 V D R G MAI A+V +L S A I++ E+I T +ANG+R IGELIA+A EK + +AD T + EL++ GM L RGY+SPYFIT+ KT++C L +P I+I EKK+S+ Sbjct: 143 VMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDN-ELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISD 259 HSP 2 Score: 34.6538 bits (78), Expect = 7.284e-24 Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGI 1026 E+D LA L+LN+ K C K GFG+++KA+L + Sbjct: 285 ESDALAMLILNKHHGGLKVCAIKAPGFGDNRKASLDDL 322
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.033e-21 Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRDIMAQ 887 D ++G +A+ +V L ++ IT ++IA GT +AN D IGELIA+A +K + + + + K + EL + GM DRGYLSPYF+TN + + L DPYI+I +KK+SN + E+ PV + AQ Sbjct: 115 DLKRGIDLAVKDVVAELREISRDITGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDT-ELTVVEGMQFDRGYLSPYFVTNSEKMDADLEDPYILIYDKKISN------MKELLPVLEKTAQ 242 HSP 2 Score: 34.2686 bits (77), Expect = 4.033e-21 Identity = 20/60 (33.33%), Postives = 31/60 (51.67%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGIG---QNPVMESHEQEKILNANL 1083 E + LA+LV+N++ K C K GFG+ +KA L I V+ + K+ NA + Sbjct: 255 EGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATI 314
BLAST of DY262912 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.825e-21 Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 483 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRDIMAQ 887 D ++G A+ +V L + ++ I+S ++IA GT +AN D IGELIA+A EK + + + + K + EL++ GM DRGYLSPYF+TN T E L +P I+I +KK+SN + E+ P+ + AQ Sbjct: 115 DLKRGIDRAVKEVVAELKAISRSISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGMET-ELKVVEGMQFDRGYLSPYFVTNSDTMEAELDNPLILIYDKKISN------MKELLPILEKSAQ 242 HSP 2 Score: 35.039 bits (79), Expect = 6.825e-21 Identity = 21/60 (35.00%), Postives = 31/60 (51.67%), Query Frame = 1 Query: 913 ENDLLASLVLNEVATATKACVKKLLGFGESKKANLSGIG---QNPVMESHEQEKILNANL 1083 E + LA+LV+N++ K C K GFG+ +KA L I V+ + K+ NA L Sbjct: 255 EGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATL 314 The following BLAST results are available for this feature:
BLAST of DY262912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262912 ID=DY262912; Name=DY262912; organism=Citrus clementina; type=EST; length=1281bpback to top |