DY262933

Overview
NameDY262933
Unique NameDY262933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1350
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2378 contig Ccv1_Contig2378:1..1350. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 3.740e-106
Identity = 192/349 (55.01%), Postives = 243/349 (69.63%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARK 1047
            PIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++  PGDILIFM GQ++IE     + E +E+L        P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S                  C+RLYT+SAY NE+L + VPEIQRTNL NVV             F FMDPPP++N+LNSMYQLW+LGAL+N G LT  G  MVEFPLDP L+KML++   +GC  E+L IVSMLSVP++F+RPK R EESD  RE F+            Y   K+ +    WC + ++H K+ R+ R+
Sbjct:  700 PIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVRE 1043          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 4.885e-106
Identity = 192/349 (55.01%), Postives = 243/349 (69.63%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARK 1047
            PIFHIPGRTFPV+ L+SKTP EDYVEAAVKQ++ +H++  PGDILIFM GQ++IE     + E +E+L        P L +LPIYSQLP+DLQAKIF+KA +G RKCIVATNIAETSLTVDGI +VID+GY K+KV+NP++GMDALQ++P+S                  C+RLYT+SAY NE+L + VPEIQRTNL NVV             F FMDPPP++N+LNSMYQLW+LGAL+N G LT  G  MVEFPLDP L+KML++   +GC  E+L IVSMLSVP++F+RPK R EESD  RE F+            Y   K+ +    WC + ++H K+ R+ R+
Sbjct:  700 PIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-----ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVRE 1043          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=2 SV=2)

HSP 1 Score: 380.563 bits (976), Expect = 1.203e-104
Identity = 197/360 (54.72%), Postives = 241/360 (66.94%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARKGEIPVAGYSQD 1080
            P F IPGRTFPV   +++TP EDYV+AAVKQA+TIH+    GDILIFM GQ++IE  C  +KE++ +L      E P L +LPIYSQLP+DLQAKIF++A  G RK IVATNIAETSLTVDGI +VID G+ KMKVYNP++GMDAL +FPVS                  CYRLYTE  + +E+L S VPEIQRTNL NVV             F FMD PPQ+N+LNSMYQLW LGAL+N G LT +G KMVEFPLDP L+KML+M  ++GC DEVLTIVSMLSVP++FFRPK R EE+DA +E F             Y   ++      WC + YLHVK+ ++ R+    +    QD
Sbjct:  610 PTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-----DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQD 964          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 2.596e-99
Identity = 180/348 (51.72%), Postives = 233/348 (66.95%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            P F IPGRT+PV+ +++K PC DYVEAAV+Q + IH++ P GDIL+FMTGQ++IEA C  + +R+ QL      + P L ILPIYSQ+PADLQAKIF+ A+ G RK +VATNIAETSLTV GI YV+DTGY K+K+YN K+G+D LQV P+S                   YRLYTE AY+ EM  + +PEIQRTNL N V             FDFMD PP + ++ S+Y+LW LGAL+N G LT LG KM  FP+DP L+K++++ E   C +E++TIVSMLSVPSVF+RPK+RAEESDAARE F+       +    Y   +       WC + +LH K+ +RAR
Sbjct:  660 PQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQL-----HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRAR 1002          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 8.944e-92
Identity = 173/347 (49.86%), Postives = 229/347 (65.99%), Query Frame = 1
Query:    4 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            +F IPGRTFPV+  Y+K P  DY++A++   M IH++ PPGDIL+F+TGQ+EI+AAC  L ERM+ L S+    VP+L+ILP+YS LP+++Q KIFE A  G+RK ++ATNIAETSLT+DGI+YVID G+ K K +NPK GMD+L V P+S                  CYRLYTESA+ NEML S +PEIQRTNLGN V             FDFMDPPP + ++++M QL+ LGAL+  G LT LG KM EFPLDP L+KML+    LGC DE+LT+V+MLSV +VF+RPK++   +D  +  F             Y   K++     WC E ++  +S RRA+
Sbjct:  677 LFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSN----VPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQ 1019          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 8.371e-90
Identity = 170/348 (48.85%), Postives = 224/348 (64.37%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            PIF IPGRT+PV  LY+K P  DY++A++   M IH+T PPGDIL+F+TGQ+EI+ AC  L ERM+ L      +VPEL+ILP+YS LP+++Q +IF+ A  G+RK ++ATNIAETSLT+DGI+YV+D G+ K KVYN K G+D L V P+S                  CYRLYTE AY +EML + VPEIQRTNL + V             FDFMD PP E ++ +M QL+ LGAL++ G LT LG +M EFPL+P L KML+M   LGC +E+LTIVSMLSV +VF+RPKD+   +D  +  F             Y+  K+      WC E ++  +S RRA+
Sbjct:  757 PIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQ 1100          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 8.371e-90
Identity = 170/348 (48.85%), Postives = 224/348 (64.37%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            PIF IPGRT+PV  LY+K P  DY++A++   M IH+T PPGDIL+F+TGQ+EI+ AC  L ERM+ L      +VPEL+ILP+YS LP+++Q +IF+ A  G+RK ++ATNIAETSLT+DGI+YV+D G+ K KVYN K G+D L V P+S                  CYRLYTE AY +EML + VPEIQRTNL + V             FDFMD PP E ++ +M QL+ LGAL++ G LT LG +M EFPL+P L KML+M   LGC +E+LTIVSMLSV +VF+RPKD+   +D  +  F             Y+  K+      WC E ++  +S RRA+
Sbjct:  733 PIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL----GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQ 1076          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 4.594e-88
Identity = 163/348 (46.84%), Postives = 225/348 (64.66%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            PIF IPGRTFPV  LY++ P  DY+EAA    M IH+T PPGD+L+F+TGQ+EI+ +C  L ERM+    S   +VPEL+ILP+Y  LP+++Q +IF+ A  G RK ++ATNIAETSLT+DGIFYV+D G+ K K+YNPK GMD+L V P+S                  CYRLYTE A+ +EMLP+PVPEIQRTNL + +             FDFMD PP ++++ ++  L  L AL+  G LT LG +M EFPL+P L+K+L+M   LGC +EVLTIV+ML+V ++F+RPK++ + +D  +  F             Y+  K+      WC E ++ V+S +RA+
Sbjct:  708 PIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMK----SMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQ 1051          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 1.337e-87
Identity = 161/347 (46.40%), Postives = 223/347 (64.27%), Query Frame = 1
Query:    4 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            IF IPGRTFPV  LY+K P  DY++AA+   + IH+T P GDIL+F+TGQ+EI++AC +L ERM+ L     + VPEL+ILP+YS LP+++Q++IF+    G RK +VATNIAE SLT+DGI+YV+D G+ K  VYNPK G+++L + P+S                  CYRLYTESAY NEM P+ +PEIQR NLG                FDFMDPP  + ++++M QL+ LGAL+  G LT LG KM EFPL+PPL+KMLL    LGC DE+LT+++M+   ++F+RP+++  ++D  R  F             Y   K+ +  G WC E ++  +S RRA+
Sbjct:  684 IFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGL----GKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQ 1026          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 1.478e-86
Identity = 156/347 (44.96%), Postives = 226/347 (65.13%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRA 1041
            PIF IPGR++PV  +Y+K P  DY++AA+   M IH++  PGDIL+F+TGQ+EI+ +C  L ER + L  S    +PEL+ILP+YS LP+++Q++IFE A  G RK ++ATNIAETSLT+DGI+YV+D G+ K   ++PK+GMD+L V P+S                  CYRLYTESAY NEMLPSP+PEIQR NL + +             FDFMDPPP + ++ ++  L+ L AL++ G LT LG KM +FP++P L+K+L+   +LGC +E+L+I++MLSVP+++ RP+++ +E+D  R  F+            Y+  K      +WC E Y+  +  RRA
Sbjct:  679 PIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDS----IPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRA 1021          
The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PRP16_HUMAN3.740e-10655.01Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
PRP16_BOVIN4.885e-10655.01Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
MOG1_CAEEL1.203e-10454.72Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP16_SCHPO2.596e-9951.72Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
DHX8_DICDI8.944e-9249.86ATP-dependent RNA helicase dhx8 OS=Dictyostelium d... [more]
DHX8_MOUSE8.371e-9048.85ATP-dependent RNA helicase DHX8 OS=Mus musculus GN... [more]
DHX8_HUMAN8.371e-9048.85ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN... [more]
MOG5_CAEEL4.594e-8846.84Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX8_ARATH1.337e-8746.40Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP22_SCHPO1.478e-8644.96Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bp
CCAATATTCCACATTCCTGGACGAACCTTTCCTGTGAATACTTTGTACAG
TAAAACCCCATGTGAGGACTATGTTGAAGCTGCAGTAAAGCAGGCTATGA
CTATCCACATCACCAGCCCTCCAGGCGACATCCTAATCTTCATGACTGGC
CAAGATGAGATTGAGGCAGCATGTTTTGCCCTTAAGGAGCGCATGGAACA
GCTCATCTCCTCCACCACGAGAGAGGTTCCTGAACTCTTAATACTGCCAA
TATACTCGCAGTTGCCAGCTGACTTGCAAGCAAAGATATTCGAGAAAGCT
AAAGAGGGCACTCGCAAATGCATTGTTGCCACCAACATCGCTGAGACATC
GCTGACTGTAGATGGAATTTTTTATGTCATTGACACAGGTTATGGTAAAA
TGAAAGTTTACAACCCTAAGATGGGTATGGATGCTCTTCAAGTGTTCCCT
GTCAGCCGTGCTGCTGCTGATCAGCGAGCCGGACGTGCTGGTAGAACTGG
GCCTGGTACGTGTTATAGACTATATACGGAGAGTGCATACCTGAATGAAA
TGCTGCCCAGTCCTGTGCCGGAGATCCAGAGGACCAACCTTGGCAATGTG
GTGTTGTTGCTTAAGTCTCTTAAAATTGATAACCTGCTGGATTTTGATTT
CATGGACCCACCACCACAAGAAAACATCTTGAATTCTATGTACCAGTTGT
GGGTCTTGGGGGCACTTAACAATGTCGGGGCTTTGACTGACCTTGGCTGG
AAAATGGTGGAGTTCCCGCTGGACCCCCCACTTGCTAAGATGCTTTTGAT
GGGTGAACAGCTAGGATGCCTAGATGAGGTTTTGACAATTGTATCTATGC
TTTCAGTGCCATCAGTATTCTTCCGGCCTAAAGATAGGGCAGAGGAGAGT
GATGCAGCGAGAGAAAATTTTTCGTACAGGAATCTGACCACTTAACTCTG
CTTTATGTTTTACAGCATTGGAAAGAGCACCAGTATCGGGGGAGATTGGT
GTGAGGAACTTTACCTGCATGTTAAATCATAACGAAGGGCCAGAAAAGGT
GAAATCCCAGTTGCTGGATATTCCCAGGACGCTTAAAATCCCGCTAACAT
CCCGTGGGGCATGAATTTCAAAGTTGGTCAAAAAAACCATCTTGTTTGGC
TAACTTCCCAAAGGCCTGCAAAAAATAAAGGGGGGTGGGGGAAAAAAATT
AATTTGGGGGAAAGGGAAAGGCCTTTGTCCTCTCGCCCCCCCAAACAAGG
GGTCTTTTTTTGGGTGGTTGGGGGTTTAAACCCCCCCCGCAAAAAAGAGG
GGGTGTTTTTATATTCTAAAATATTAATATTTTTTTTTATAACACAAAAA
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