DY262937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: VPS53_MOUSE (Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus GN=Vps53 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.216e-47 Identity = 110/314 (35.03%), Postives = 185/314 (58.92%), Query Frame = 1 Query: 25 VLHSSTELFFIIKRSLKRCTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQT--SNAASYTKFVSREMSKAEALLKVILSPVDSV---ADTYRALLPEGTPMEFQRILELKGLKK 921 VL S +LF K+ + +C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G R + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++PW ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q ASYTK V + M++AE +LKV+++P + + D Y LL + FQ+IL++KGLK+ Sbjct: 467 VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGSEVARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKR 780
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: VPS53_CHICK (Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus GN=VPS53 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 9.308e-46 Identity = 107/314 (34.08%), Postives = 185/314 (58.92%), Query Frame = 1 Query: 25 VLHSSTELFFIIKRSLKRCTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQT--SNAASYTKFVSREMSKAEALLKVILSPVDS---VADTYRALLPEGTPMEFQRILELKGLKK 921 VL S +LF K+ + +C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D+ L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q ASYT+ V + M++AE +LKV+++P + D Y LL + + FQ+IL++KGLK+ Sbjct: 466 VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKR 779
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: YNP8_CAEEL (Uncharacterized protein T05G5.8 OS=Caenorhabditis elegans GN=T05G5.8 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 2.809e-34 Identity = 95/312 (30.45%), Postives = 171/312 (54.81%), Query Frame = 1 Query: 34 SSTELFFIIKRSLKRCTALTKSQTLL--NLFKVFQRILKAYATK-LFARLPRGGTGIVAAATGMD------GQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNAASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELKGLKK 921 SS ++F ++K+ + + L+ L ++ V + L+ YAT L A LP G+ AA R++ + ++C I+ +A++C +TS L E +S+ I GVD+S+ + F ++ ++L LV +E+ D + +++V W +++ VGD+S ++ + L ++P++ +LS YF F KLA+ L +F ++F+C+ IS GA+Q+LL+T ++KT LL +PS+ + +Y V+ ++KAE +LKV+ L VD + Y LLP E Q++LE+KG+K+ Sbjct: 409 SSADMFLLLKKVITESSKLSSEPDALIRDVIGVVRVCLRGYATSCLVAFLPSLGSQQSGAANLFSLIREEIAYPRLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSLQVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPPTAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKR 715
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: VPS53_PONAB (Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii GN=VPS53 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 7.410e-27 Identity = 71/230 (30.87%), Postives = 128/230 (55.65%), Query Frame = 1 Query: 25 VLHSSTELFFIIKRSLKRCTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQM 684 VL S +LF K+ + +C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+ Sbjct: 467 VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQV 696
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: VPS53_HUMAN (Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens GN=VPS53 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 7.410e-27 Identity = 71/230 (30.87%), Postives = 128/230 (55.65%), Query Frame = 1 Query: 25 VLHSSTELFFIIKRSLKRCTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQM 684 VL S +LF K+ + +C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+ Sbjct: 467 VLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSEVAKFTLEELCLICNILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCVKFANSFIPKFITHLFKCKPISMVGAEQV 696
BLAST of DY262937 vs. ExPASy Swiss-Prot
Match: YDLF_SCHPO (Uncharacterized protein C3A12.15 OS=Schizosaccharomyces pombe GN=SPAC3A12.15 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.599e-21 Identity = 87/309 (28.16%), Postives = 152/309 (49.19%), Query Frame = 1 Query: 19 NNVLHSSTELFFIIKRSLKRCTALTKSQTLLNLFKVFQRILKAYATKLFARLPRGGTGIVAAATGMDGQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDN----EMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS-PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELKGLKK 921 + VL SS +LF +++L + LT+S L+ L +F + L+ Y +D Q + +D I +N+AEY ++T+ +L + +I + + D + SEV + VI+ + TL+ KF+N ++ ++++ ++E+VGDQS YV G +T+ S++ ++ + F D+ S +F I+ K ISE GA+Q+LLD + K LL +P L + S SY ++ M E +LK +L+P A +Y L+ + + F +LELKG+ K Sbjct: 400 SQVLSSSIKLFQAYRKTLTQFVRLTRSSPLVGLKNLFIKWLRRYTQVEL----------------LDYQESSTFKD---IAIRLNTAEYIYRTTIELEKRFQEISNKEFKDKMSFSEVLE----VISSSRGTLLKFATGKFENVLNSDLEPLSKMDLKNIETVGDQSSYVGGAVQNMTAKASEFLSVVDLNMFARNFCDRSCESFTRQFLNAIYLAKPISEVGAEQLLLDLYSFKNALLKLPDLKQDYSITDSYINHLTIFMGYIETVLKTLLTPASPKAGFIQSYIFLVKDRSVTNFTVLLELKGVGK 685 The following BLAST results are available for this feature:
BLAST of DY262937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262937 ID=DY262937; Name=DY262937; organism=Citrus clementina; type=EST; length=1311bpback to top |