DY262948 | Citrus Genome Database

Overview


Name	DY262948
Unique Name	DY262948
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1323

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.682e-35
Identity = 61/180 (33.89%), Postives = 99/180 (55.00%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQA-RLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+++    ++ +D D    + + EWRD+ L  P  A IE I   W+    +DIG+   IP+  ++  ++S    +  +AGGIAGA SRT+TAPLDRLKV++QV  +++  +    R++ KE             V+K+APE+A+ F +      Q + +  EE   IG F R ++G
Sbjct:  119 GLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP-VADIEEIIRFWKHSTGIDIGDSLTIPDEFTEEERKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKVMMQVHGSKSMNIFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYE----QYKKLLTEEGQKIGTFERFISG 293

HSP 2 Score: 58.151 bits (139), Expect = 2.682e-35
Identity = 28/97 (28.87%), Postives = 52/97 (53.61%), Query Frame = 2

Query:  113 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:   19 EPPTRYETLFQALDRNGDGVVDIRELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115

HSP 3 Score: 31.187 bits (69), Expect = 2.682e-35
Identity = 25/77 (32.47%), Postives = 34/77 (44.16%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFK 1186
            MAGA AQ  IYP+E  K  +     G+   +    + + K+   +G  A  KG  P+  G  P      LA YE  K
Sbjct:  295 MAGATAQTFIYPMEVMKTRLAVGKTGQYSGIYDCAKKILKY---EGFGAFYKGYVPNLLGIIPYA-GIDLAVYELLK 367

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BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.291e-34
Identity = 58/180 (32.22%), Postives = 97/180 (53.89%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQA-RLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+++    ++ +D D    + + EWRD+ L  P    IE I   W+    +DIG+   IP+  ++  ++S    +  +AGG+AGA SRT+TAPLDRLKV++QV  +++  +    R++ KE             V+K+APE+A+ F        Q + +  EE   +G F R ++G
Sbjct:  119 GLHISEKQAELILQSIDSDGTMTVDWNEWRDYFLFNP-VTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKSMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYE----QYKKLLTEEGQKLGTFERFISG 293

HSP 2 Score: 61.6178 bits (148), Expect = 1.291e-34
Identity = 29/97 (29.90%), Postives = 53/97 (54.64%), Query Frame = 2

Query:  113 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            E   R  +LF   D    G +D  +++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I P E+  +L
Sbjct:   19 EPPTRYETLFRALDRNGDGVVDIGELQQGLQSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEPSEIVQSL 115

HSP 3 Score: 28.8758 bits (63), Expect = 1.291e-34
Identity = 25/77 (32.47%), Postives = 34/77 (44.16%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFK 1186
            MAGA AQ  IYP+E  K  +  +  G+   +    + + K    +G  A  KG  P+  G  P      LA YE  K
Sbjct:  295 MAGATAQTFIYPMEVLKTRLAVAKTGQYSGIYGCAKKILKH---EGFGAFYKGYIPNLLGIIPYA-GIDLAVYELLK 367

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BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.831e-34
Identity = 59/182 (32.42%), Postives = 97/182 (53.30%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQA---RLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+++    ++ +D D    + + EWRD+ L  P    IE I   W+    +DIG+   IP+  ++  ++S    +  +AGGIAGA SRT+TAPLDRLK+++QV  +++    +    R++ KE             V+K+APE+A+ F        Q + +  EE   IG F R ++G
Sbjct:  119 GLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFNP-VTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKIMMQVHGSKSDKMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYE----QYKKLLTEEGQKIGTFERFISG 295

HSP 2 Score: 58.9214 bits (141), Expect = 2.831e-34
Identity = 31/109 (28.44%), Postives = 55/109 (50.46%), Query Frame = 2

Query:   77 DHVLLALRESKEERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            D VL        E+  R  +LF   D    G +D  +++ GL  L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:    7 DFVLPTAACQDAEQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115

HSP 3 Score: 31.187 bits (69), Expect = 2.831e-34
Identity = 26/77 (33.77%), Postives = 34/77 (44.16%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFK 1186
            MAGA AQ  IYP+E  K  +     G+   +    + + K    +GL A  KG  P+  G  P      LA YE  K
Sbjct:  297 MAGATAQTFIYPMEVMKTRLAVGKTGQYSGIYDCAKKILKH---EGLGAFYKGYVPNLLGIIPYA-GIDLAVYELLK 369

[Close]

BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.208e-34
Identity = 59/182 (32.42%), Postives = 98/182 (53.85%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQV---QTAQARLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+++    ++ +D D    + + EWRD+ L  P    IE I   W+    +DIG+   IP+  ++  ++S    +  +AGG+AGA SRT+TAPLDRLKV++QV   ++A+  +    +++ KE             V+K+APE+A+ F        Q + +  EE   IG F R ++G
Sbjct:  119 GLTISEQQAELILQSIDADGTMTVDWNEWRDYFLFNP-VTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKSAKMNIYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYE----QYKKLLTEEGQKIGTFERFVSG 295

HSP 2 Score: 58.5362 bits (140), Expect = 6.208e-34
Identity = 28/97 (28.87%), Postives = 53/97 (54.64%), Query Frame = 2

Query:  113 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            E   R  +LF   D    G +D ++++ GL +L IP      + +F   D N+DG++D++EF +Y+   E ++   F+++D  ++G I   E+  +L
Sbjct:   19 EPPTRYETLFQKLDRNGDGVVDISELQEGLKSLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSL 115

HSP 3 Score: 30.0314 bits (66), Expect = 6.208e-34
Identity = 25/77 (32.47%), Postives = 35/77 (45.45%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFK 1186
            MAGA AQ  IYP+E  K  +     G+   +    + + K+   +G+ A  KG  P+  G  P      LA YE  K
Sbjct:  297 MAGATAQTFIYPMEVLKTRLAVGKTGQYSGMFDCAKKILKY---EGMGAFYKGYVPNLLGIIPYA-GIDLAVYELLK 369

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BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.531e-33
Identity = 60/182 (32.97%), Postives = 105/182 (57.69%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQAR---LVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+++  + ++ +DK+    I + EWRD+ LL+P E  I  I  +W+   + D+GE  ++P+  +   +++    ++ +AGG AGA SRT TAPLDRLKV++QV  +++    ++    ++ +E             V+K+APESAI FM       Q++ I G +++ +G   RL+AG
Sbjct:  155 GVNISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPAE-NIPEIILYWKHSTIFDVGENLLVPDEFTVEEKQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYE----QMKRIIGSDQETLGIHERLVAG 331

HSP 2 Score: 47.3654 bits (111), Expect = 6.531e-33
Identity = 25/97 (25.77%), Postives = 51/97 (52.58%), Query Frame = 2

Query:  113 ERDIRIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            E + R++ LF   D    G +    +  GL  L +       + + K  D ++DG++D++EF  Y+   E +L  +F+++D +++G I  +E+  +L
Sbjct:   55 EHETRLQILFQELDVNKDGGICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFEEFVHYLRDHEKKLRLVFKSLDKKNDGRIDAQEIMQSL 151

HSP 3 Score: 31.9574 bits (71), Expect = 6.531e-33
Identity = 30/108 (27.78%), Postives = 44/108 (40.74%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFKKIFQGGLTFFSGKGETRGSSLCGTFGGVVGK 1279
            +AG +AQ++IYP+E  K   T   L +  + Q  +   +K    +G+ A  KG  P+  G  P      LA YE  K  +       S          CGT     G+
Sbjct:  333 LAGVIAQSSIYPMEVLK---TRMALRKTGQYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYA-GIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQ 436

[Close]

BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.410e-31
Identity = 58/181 (32.04%), Postives = 97/181 (53.59%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQ--ARLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            GI IS E   + ++ +D D    + + EWRD  L  P +  I+ I  +W+   ++DIG+   IP+  ++  +++    K  +AGG+AGA SRT TAPLDRLKV++QV  ++  A ++  ++++ KE             V+K+APE+A+ F        Q + +   E   +G   R +AG
Sbjct:  119 GINISLEHAEKILKSMDADGTLTVDWNEWRDHFLFNPAD-NIQQIIRYWKHSTVLDIGDSLTIPDEFTEEEKKTGQWWKQLLAGGMAGAVSRTGTAPLDRLKVMMQVHGSKGNANIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYE----QYKKLFTSESGKLGTAERFIAG 294

HSP 2 Score: 48.521 bits (114), Expect = 9.410e-31
Identity = 25/93 (26.88%), Postives = 47/93 (50.54%), Query Frame = 2

Query:  125 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            R   LF+  D    G +D  +++ GL A+ +       + +    D N+DG +D+ EF RY++  E ++   F ++D   +G I   E+ ++L
Sbjct:   23 RYAELFHKLDVNKDGKVDIVELQEGLKAMGMAVGKGAEEKIVAAGDTNKDGHLDFGEFIRYLEEHEKKMKIAFTSLDKNKDGKIESAEIMNSL 115

HSP 3 Score: 31.9574 bits (71), Expect = 9.410e-31
Identity = 31/108 (28.70%), Postives = 43/108 (39.81%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFKKIFQGGLTFFSGKGETRGSSLCGTFGGVVGK 1279
            +AGA AQ +IYP+E  K   T   +G+  +        +K    +G+RA  KG  P+  G  P      LA YE  K  +       S          CGT     G+
Sbjct:  296 LAGATAQTSIYPMEVLK---TRLAVGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYA-GIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQ 399

[Close]

BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.412e-31
Identity = 60/182 (32.97%), Postives = 101/182 (55.49%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQAR---LVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            G+ IS+E+  + ++ +DK+    I + EWRD+ LL+P E  I  I  +W+   + D+GE  ++P+  +   + +    ++ +AGG AGA SRT TAPLDRLKV++QV   ++    +     ++ +E             VLK+APESAI FM       Q++ + G  ++ +G   RL++G
Sbjct:  111 GVHISEEQAEKILKSMDKNGTMTIDWNEWRDYHLLHPAE-NIPEIILYWKHSTIFDVGESMLVPDEFTAEEKNTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHATRSNSMGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYE----QIKRLIGSNQETLGILERLVSG 287

HSP 2 Score: 40.4318 bits (93), Expect = 9.412e-31
Identity = 19/68 (27.94%), Postives = 41/68 (60.29%), Query Frame = 2

Query:  200 LSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            L + +  +  K+ K + K  D + DG++D++EF  Y+   E +L  +F+++D +++G I  +E+  +L
Sbjct:   40 LPSQEFDSYRKWRKKVVKAGDKDLDGQLDFEEFVHYLRDHEKKLRLVFKSLDKKNDGHIDSQEIMQSL 107

HSP 3 Score: 32.7278 bits (73), Expect = 9.412e-31
Identity = 31/108 (28.70%), Postives = 43/108 (39.81%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFKKIFQGGLTFFSGKGETRGSSLCGTFGGVVGK 1279
            +AGA+AQ++IYP+E  K   T   LGR  +        +     +G+ A  KG  P+  G  P      LA YE  K  +       S          CGT     G+
Sbjct:  289 LAGAIAQSSIYPMEVLK---TRLALGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYA-GIDLAVYETLKNSWLQRFATDSADPGVFVLLACGTMSSTCGQ 392

[Close]

BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.676e-30
Identity = 56/181 (30.94%), Postives = 98/181 (54.14%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQ--ARLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            GI+IS +   + ++ +D D    + + EWRD  L  P +  I+ I  +W+   ++DIG+   IP+  ++  +++    K  +AGG+AGA SRT TAPLDRLKV++QV  ++  + ++  ++++ KE             V+K+APE+A+ F        Q + +   E   +G   R +AG
Sbjct:  119 GIKISLDHADKILKSMDSDGTLTVDWNEWRDHFLFNPAD-NIQQIIRYWKHSTVLDIGDSLTIPDEFTEEEKKTGQWWKQLMAGGMAGAVSRTGTAPLDRLKVMMQVHGSKGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYE----QYKKLFTSESGKLGTAERFVAG 294

HSP 2 Score: 48.521 bits (114), Expect = 2.676e-30
Identity = 25/93 (26.88%), Postives = 47/93 (50.54%), Query Frame = 2

Query:  125 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            R   LF+  D    G +D  +++ GL A+ +       + +    D N+DG +D+ EF RY++  E ++   F ++D   +G I   E+ ++L
Sbjct:   23 RYEELFHKLDVNKDGKVDILELQEGLKAMGMEVGKGAEEKIVAAGDTNKDGHLDFGEFIRYLEEHEKKMKIAFTSLDKNKDGKIESAEIMNSL 115

HSP 3 Score: 33.113 bits (74), Expect = 2.676e-30
Identity = 27/77 (35.06%), Postives = 36/77 (46.75%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFK 1186
            +AGA AQ +IYP+E  K   T   +GR  +        +K    +G+RA  KG  P+  G  P      LA YE  K
Sbjct:  296 LAGATAQTSIYPMEVLK---TRLAVGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYA-GIDLAIYETLK 368

[Close]

BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.562e-30
Identity = 58/184 (31.52%), Postives = 101/184 (54.89%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQTAQAR---LVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEK--DDIGAFGRLLAG 951
            G+ + D +    V  +D+  +  +  +E+++F++LYP  + +++I   W    ++DIGE + IPE  S+   +     ++ +AGG AGA SRT TAP DR+KV LQV +++     ++  ++ +  E             V+K+APESAI FM  +    QL+ +  ++K  ++I  F RL AG
Sbjct:  173 GVPLDDHKAQHIVNKMDQTGSASVDLKEFQEFMMLYP-SSDLKDIVDFWRHNLIIDIGEDSQIPEDFSQQEMQEGIWWRHLVAGGAAGAVSRTCTAPFDRIKVYLQVNSSKTNRLGVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYD----QLKRLIQKKKGNEEISTFERLCAG 351

HSP 2 Score: 40.4318 bits (93), Expect = 7.562e-30
Identity = 25/91 (27.47%), Postives = 44/91 (48.35%), Query Frame = 2

Query:  110 EERDIRIRSLFNFFDAANSGYLDYAQIESGLS--ALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCI 376
            EE++ +IR +++  D  N G +D   +   L      IPA    A  +      + +GRVD+  F  Y+   E +L ++F  +D  H+G +
Sbjct:   72 EEKERQIRDIYDRLDIDNDGTIDIRDLTLALKHETPHIPANL--APVIMSKMSPDDEGRVDFYSFSSYVLENEQKLAEMFADMDRNHDGLV 160

HSP 3 Score: 36.5798 bits (83), Expect = 7.562e-30
Identity = 31/110 (28.18%), Postives = 46/110 (41.82%), Query Frame = 2

Query:  959 AGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFKKIFQGGLTFFSGKGETRGSSLCGTFGGVVGKKNS 1288
            AGA++Q+ IYP+E  K  +     G+ +R  I      K    +G+R   KG  P+  G  P      LA YE  K+ +       S +        CGT     G+ +S
Sbjct:  354 AGAISQSTIYPMEVMKTRLALRKTGQLDRGII--HFAHKMYTKEGIRCFYKGYLPNLIGIIPYA-GIDLAIYETLKRTYVRYYETNSSEPGVLALLACGTCSSTCGQLSS 460

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BLAST of DY262948 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.881e-30
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 1

Query:  427 GIEISDEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVQRS----KYFIAGGIAGAASRTATAPLDRLKVVLQVQ--TAQARLVPTIRKIWKEEXXXXXXXXXXXXVLKVAPESAINFMLMNF*RMQLEII*GEEKDDIGAFGRLLAG 951
            GI IS +   + ++ +D D    + + EWRD  L  P +  I+ I   W+   ++DIG+   IP+  ++  +++    K+ +AGG+AGA SRT TAPLDRLKV++QV      + ++  ++++ KE             V+K+APE+A+ F        Q + +   E   +G   R +AG
Sbjct:  119 GINISLDHAEKILKSMDSDGTLTVDWNEWRDHFLFNPAD-NIQQIIRFWKHSTVLDIGDSLTIPDEFTEEEKKTGQWWKHLLAGGMAGAVSRTGTAPLDRLKVMMQVHGTKGNSNIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYE----QYKKLFTSESGKLGTAERFIAG 294

HSP 2 Score: 49.6766 bits (117), Expect = 9.881e-30
Identity = 25/93 (26.88%), Postives = 48/93 (51.61%), Query Frame = 2

Query:  125 RIRSLFNFFDAANSGYLDYAQIESGLSALQIPAQYKYAKDLFKVCDANRDGRVDYQEFRRYMDIKEMELYKIFQTIDVEHNGCILPEELWDAL 403
            R   LF+  D    G +D  +++ GL A+ +       + + +  D N+DG +D+ EF RY++  E ++   F ++D   +G I   E+ ++L
Sbjct:   23 RYAELFHKLDVNKDGKVDILELQEGLKAMGMAVGKGAEEKIVEAGDTNKDGHLDFGEFMRYLEEHEKKMKIAFTSLDKNKDGKIESSEVMNSL 115

HSP 3 Score: 29.6462 bits (65), Expect = 9.881e-30
Identity = 30/108 (27.78%), Postives = 42/108 (38.89%), Query Frame = 2

Query:  956 MAGAVAQNAIYPLESGKNTVTDSGLGRGERVQI*VRLLRKFGFLKGLRASIKGLGPSFFGNFPECWAWTLAPYENFKKIFQGGLTFFSGKGETRGSSLCGTFGGVVGK 1279
            +AGA AQ +IYP+E  K   T   +G+  +        +K    +G+ A  KG  P+  G  P      LA YE  K  +       S          CGT     G+
Sbjct:  296 LAGATAQTSIYPMEVLK---TRLAVGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYA-GIDLAIYETLKNYWLQNYAKDSANPGVLVLLGCGTVSSTCGQ 399

The following BLAST results are available for this feature:

BLAST of DY262948 vs. ExPASy Swiss-Prot

BLAST of DY262948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23


Match Name	E-value	Identity	Description
SCMC1_RABIT	2.682e-35	33.89	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCMC1_MOUSE	1.291e-34	32.22	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCMC1_HUMAN	2.831e-34	32.42	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCMC1_BOVIN	6.208e-34	32.42	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCMC2_XENTR	6.531e-33	32.97	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCMC1_XENTR	9.410e-31	32.04	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCM2B_DANRE	9.412e-31	32.97	Calcium-binding mitochondrial carrier protein SCaM...	[more]
SCM1B_XENLA	2.676e-30	30.94	Calcium-binding mitochondrial carrier protein SCaM...	[more]
CMC2_CAEEL	7.562e-30	31.52	Putative calcium-binding mitochondrial carrier F55...	[more]
SCM1A_XENLA	9.881e-30	30.94	Calcium-binding mitochondrial carrier protein SCaM...	[more]

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Properties


Property Name	Value
Genbank description	IC0AAA10BF05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262948 ID=DY262948; Name=DY262948; organism=Citrus clementina; type=EST; length=1323bp
CGTCGGATTGCCAAAGATGGAGTCGACCCGCTCCGCTTCATGCAACCCGG
TGAGGAAATCGGGTCCGGTCACGATGGACCACGTGCTGCTCGCGTTACGC
GAGAGCAAGGAAGAGAGGGACATCCGAATCCGGAGCCTCTTCAATTTCTT
CGATGCGGCGAATTCCGGATACTTGGATTACGCGCAGATCGAGAGCGGGT
TGTCGGCGCTGCAGATTCCGGCACAGTACAAGTACGCGAAGGATTTGTTC
AAAGTCTGCGACGCAAACAGAGACGGACGCGTCGATTATCAGGAGTTTCG
TCGATACATGGACATTAAAGAGATGGAGCTTTATAAGATTTTTCAAACTA
TTGATGTCGAGCACAATGGATGCATTTTGCCCGAAGAGCTTTGGGACGCG
CTTGTTAAGGCTGTTTCTGTTTTTCAGGGATCGAGATTAGTGACGAGGAA
TTGGCTCGTTTTGTGGAGCATGTTGATAAGGATAATAATGGAATCATAAC
TTTTGAAGAATGGAGAGATTTCCTTCTACTCTATCCTCATGAGGCAACTA
TTGAAAATATTTATCATCATTGGGAGAGGGTATGCCTCGTAGATATTGGA
GAACAGGCTGTTATTCCAGAAGGCATCAGTAAACATGTTCAGAGAAGCAA
ATACTTTATTGCTGGAGGAATAGCAGGTGCTGCTTCTCGTACTGCAACTG
CTCCTCTTGACCGCCTGAAGGTTGTATTGCAAGTCCAGACGGCACAAGCT
CGTCTTGTGCCAACTATAAGAAAGATATGGAAGGAAGAAGGTTTTTTGGG
ATTTTTCCGAGGTAATGGGTTAAATGTTCTGAAGGTTGCACCTGAAAGTG
CCATAAATTTCATGCTTATGAACTTTTGAAGAATGCAATTGGAGATTATA
TAGGGGGAGGAAAAGGATGATATAGGTGCTTTTGGGAGACTTTTGGCTGG
TGGTTATGGCAGGTGCGGTCGCCCAGAATGCTATCTATCCTTTGGAATCT
GGTAAAAACACGGTTACCGACTCAGGCTTGGGAAGGGGGGAAAGGGTCCA
AATTTAGGTACGCTTACTAAGGAAATTTGGGTTCCTGAAGGGCCTCCGGG
CTTCCATAAAGGGCTTGGGGCCATCCTTTTTTGGGAATTTCCCCGAATGC
TGGGCTTGGACCTTGGCCCCGTATGAAAATTTTAAAAAAATTTTCCAAGG
GGGGCTAACTTTTTTTTCGGGAAAAGGGGAAACCCGGGGCTCCTCTCTTT
GTGGTACATTTGGGGGGGTGGTGGGGAAAAAAAATTCCTGTGGGAGAGCC
CCCTCTTGGCGGCAACACAGCGG