DY262983

Overview
NameDY262983
Unique NameDY262983
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1319
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: LACE1_HUMAN (Lactation elevated protein 1 OS=Homo sapiens GN=LACE1 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.092e-37
Identity = 100/232 (43.10%), Postives = 137/232 (59.05%), Query Frame = 2
Query:  374 TDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVS------------DPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KE 1033
            T  A S +  +      GPL  Y+  I A EL D D  Q   ++ LQ+L+++L          +  + E  G    L+S+L  +S   P +GLY+YG VGTGKTM+MD+F+  +    RKKR+HFH FML+VH R+ + K               DP+  +A EIS+EA LLC DEF VTD+ADA+IL +LF +LF NGV++V TSNR P+ LY+  LQR  F+PFI + KE
Sbjct:   57 TPTATSETYLKALAVCHGPLDHYDFLIKAHELKD-DEHQRRVIQCLQKLHEDL----------KGYNIEAEG----LFSKLFSRSK--PPRGLYVYGDVGTGKTMVMDMFYAYVEMK-RKKRVHFHGFMLDVHKRIHRLKQSLPKRKPGFMAKSYDPIAPIAEEISEEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKE 270          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: LACE1_RAT (Lactation elevated protein 1 OS=Rattus norvegicus GN=Lace1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.728e-36
Identity = 101/254 (39.76%), Postives = 142/254 (55.91%), Query Frame = 2
Query:  383 AASASIGEVHRAAAGPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVS------------DPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KEKGVVHKFWLTIN*RKMTSVPKGSTF 1108
            AAS +         GPL  Y+  I A EL + D  Q   ++ LQ+L ++L          +  + E+ G    L+S+L  ++   P KGLY+YG VGTGKTM+MD+F+  +     K+R+HFH FML+VH R+ + K               DP+  +A EIS EA LLC DEF VTD+ADA+IL +LF +LF NGV++V TSNR P+ LY+  LQR  F+PFI + KE     +    ++ RK    P G  +
Sbjct:   60 AASEAHSRALAVCHGPLAHYDFLIKAQELKN-DEHQRRVVQCLQKLQEDL----------KGYNIEEGG----LFSKLFSRNK--PPKGLYVYGDVGTGKTMVMDMFYEYVEVK-SKRRVHFHGFMLDVHKRIHRLKQSLPKRKVGFMAKSYDPIAPIAEEISQEASLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGVDYRKRELTPAGKLY 295          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: LACE1_MOUSE (Lactation elevated protein 1 OS=Mus musculus GN=Lace1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.499e-35
Identity = 101/240 (42.08%), Postives = 138/240 (57.50%), Query Frame = 2
Query:  425 GPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSR-------LQKHKG-----VSDPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KEKGVVHKFWLTIN*RKMTSVPKGSTF 1108
            GPL  Y+  I + EL + D  Q   ++ LQ+L ++L          +  S E+ G    L+S+L  ++   P KGLY+YG VGTGKTM+MD+F+  +    RKKR+HFH FML+VH R       L K K        DP+  +A EIS E  LLC DEF VTD+ADA+IL +LF +LF NGV++V TSNR P+ LY+  LQR  F+PFI + KE     +    ++ RK    P G  +
Sbjct:   74 GPLDHYDFLIKSQELRE-DEHQRRVVQCLQKLQEDL----------KGYSIEEGG----LFSKLFSRNK--PPKGLYVYGDVGTGKTMVMDMFYAYVETK-RKKRVHFHGFMLDVHRRIHHLKQSLPKRKAGFMAKSYDPIAPIAEEISQETSLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCDTLQLDSGVDYRKRELAPAGKLY 295          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: YHCM_ECOLI (Uncharacterized protein yhcM OS=Escherichia coli (strain K12) GN=yhcM PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.393e-33
Identity = 84/202 (41.58%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  428 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVSDPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KE 1033
            P  +Y + +  G     DV Q   +  L+ +Y EL+ S          +S    R   LW +    + ++PV+GLY++GGVG GKT LMDLF+  LP   RK+R+HFH FML VH  L   +G +DPLE++A     E  +LC DEF V+D+ DA++L  L + LF  G+ LV TSN  PD LY   LQR  FLP I   K+
Sbjct:    6 PTSQYLKALNEGSHQPDDV-QKEAVSRLEIIYQELINSTPPAP----RTSGLMARVGKLWGKR-EDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGE-RKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQ 200          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: YHCM_ECO57 (Uncharacterized protein yhcM OS=Escherichia coli O157:H7 GN=yhcM PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.393e-33
Identity = 84/202 (41.58%), Postives = 114/202 (56.44%), Query Frame = 2
Query:  428 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVSDPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KE 1033
            P  +Y + +  G     DV Q   +  L+ +Y EL+ S          +S    R   LW +    + ++PV+GLY++GGVG GKT LMDLF+  LP   RK+R+HFH FML VH  L   +G +DPLE++A     E  +LC DEF V+D+ DA++L  L + LF  G+ LV TSN  PD LY   LQR  FLP I   K+
Sbjct:    6 PTSQYLKALNEGSHQPDDV-QKEAVSRLEIIYQELINSTPPAP----RTSGLMARVGKLWGKR-EDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGE-RKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQ 200          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: LACE1_DANRE (Lactation elevated protein 1 homolog OS=Danio rerio GN=lace1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 9.094e-33
Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = 2
Query:  536 ESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKG-----------VSDPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KE 1033
            E+ + C+ D   S+EK  +           S   P +G Y+YG VGTGKTMLMDLF Y    N RKKR+HF+ FML+VH R+ K K            + DP+  VA EI++E  L+C DEF V D+ADA+IL +LF  LF  GV++V TSNR P+ LY+  LQR  F+PFI + KE
Sbjct:  124 ETVNICRPDENVSNEKEDQQE-------ESSKPHPPQGYYIYGNVGTGKTMLMDLF-YSFVENRRKKRVHFNGFMLDVHRRIHKLKQSLPKRRIGKMTMYDPIFPVAMEIAEETCLICFDEFQVVDIADAMILKQLFEGLFKCGVVVVATSNRPPEELYKNGLQRAAFVPFIGVLKE 292          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: AFG1_YEAST (Protein AFG1 OS=Saccharomyces cerevisiae GN=AFG1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 9.410e-30
Identity = 96/234 (41.03%), Postives = 124/234 (52.99%), Query Frame = 2
Query:  428 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWL------WSRLLPQS--SYSPV--------KGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSR------------LQKHKGVS-DPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHN--GVILVFTSNRAPDILYERELQRDLFLPFIPL*KEK 1036
            PL EY+R +  G+L D D  Q G +  L  LYD LV+          +  +  G   WL      +SR  P++  +Y  V        +G+YLYG VG GKTMLMDLF+  +P +  KKRIHFH FM  VH R            L   KG   D +  +A EI++ + +LC DEF VTDVADA+IL RL   L  +  GV+L  TSNR PD LY   +QR  F+P I L K +
Sbjct:   36 PLQEYDRLVKLGKLRD-DTYQRGIISSLGDLYDSLVKYVPPVVKTPNAVDQVGG---WLNGLKSVFSRGKPKNIGAYVDVSKIGNSIPRGVYLYGDVGCGKTMLMDLFYTTIPNHLTKKRIHFHQFMQYVHKRSHEIVREQNLKELGDAKGKEIDTVPFLAAEIANNSHVLCFDEFQVTDVADAMILRRLMTALLSDDYGVVLFATSNRHPDELYINGVQRQSFIPCIELIKHR 265          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: N2B_HAEIR (Putative ATPase N2B OS=Haematobia irritans PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.229e-29
Identity = 88/238 (36.97%), Postives = 124/238 (52.10%), Query Frame = 2
Query:  380 AAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVE----------SADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVS---------------DPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFI 1018
            ++A  S  ++ R    P+  YE+RI + ELL   V Q  T +EL+ LY+ L            S+      R+   E+S     L +   P       KG+Y+YG VG GKT LMD+F+       +K+R+HF+ FM  VH  + K K                  DP   VA  I++E+ L+C DEF VTD+ADA+IL  LF HLF+ G++ + TSNR P+ LY+  LQR  F+PFI
Sbjct:   21 SSALCSPQQLSRRFLTPMQAYEQRIESKELLPDKV-QKKTTQELEDLYNTLKNYQPKPVRVETSSGGGFFGRFMKKEQSAPKIELLNTTAP-------KGMYIYGSVGGGKTTLMDMFYSCCDDIPKKQRVHFNSFMSKVHGLIHKVKQERGPQDRAFNSEKPLPFDPTLPVAEMIANESWLICFDEFQVTDIADAMILKSLFTHLFNEGIVCIATSNRHPNDLYKNGLQRSNFIPFI 250          
BLAST of DY262983 vs. ExPASy Swiss-Prot
Match: YBQ2_SCHPO (Uncharacterized protein C115.02c OS=Schizosaccharomyces pombe GN=SPBC115.02c PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.775e-28
Identity = 91/254 (35.83%), Postives = 130/254 (51.18%), Query Frame = 2
Query:  428 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWL------WSRLLPQSSYSPV------KGLYLYGGVGTGKTMLMDLFFYQLPCN-WRKKRIHFHDFMLNVHSR---LQKHKGVS-DPLEVVAGEISDEAILLCVDEFMVTDVADALILNRLFRHLFHNGVILVFTSNRAPDILYERELQRDLFLPFIPL*KEKGVVHKFWLTIN*RKMTSVPKGSTFVGKGSPKIMK 1138
            P+  Y +++  G +   D  Q   ++ + RLY EL              +EK     W+      +SR    +  S +      KG+YLYG VG GKT LMDLF++ LP N  R +RIHFH FM+ VH     LQ   G   D ++ +A  I+ E  +LC DE  VTDVADAL+L RLF  L   GV++  TSNRAP  LY+  +QR+ F+P I L + +  V       + R++ S  + +      SP++ K
Sbjct:   36 PIEVYNKKVNDG-VWKRDPYQETAVKAINRLYTELESYTQPPITQDSMPAEKGSILSWISPLKKMFSRKKSPTLTSSLPVPGMPKGIYLYGDVGCGKTALMDLFYHNLPPNVTRSQRIHFHAFMMQVHRTSHDLQDRYGFEIDFIDHIASGIAKETTVLCFDELQVTDVADALLLRRLFEALMKYGVVIFITSNRAPSDLYKNGIQRESFIPCIKLLEHRLQVICLDSPNDYRRLKSKTEDTYLYPANSPEVKK 288          
The following BLAST results are available for this feature:
BLAST of DY262983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
LACE1_HUMAN2.092e-3743.10Lactation elevated protein 1 OS=Homo sapiens GN=LA... [more]
LACE1_RAT6.728e-3639.76Lactation elevated protein 1 OS=Rattus norvegicus ... [more]
LACE1_MOUSE1.499e-3542.08Lactation elevated protein 1 OS=Mus musculus GN=La... [more]
YHCM_ECOLI2.393e-3341.58Uncharacterized protein yhcM OS=Escherichia coli (... [more]
YHCM_ECO572.393e-3341.58Uncharacterized protein yhcM OS=Escherichia coli O... [more]
LACE1_DANRE9.094e-3346.33Lactation elevated protein 1 homolog OS=Danio reri... [more]
AFG1_YEAST9.410e-3041.03Protein AFG1 OS=Saccharomyces cerevisiae GN=AFG1 P... [more]
N2B_HAEIR1.229e-2936.97Putative ATPase N2B OS=Haematobia irritans PE=2 SV... [more]
YBQ2_SCHPO1.775e-2835.83Uncharacterized protein C115.02c OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10CA06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262983 ID=DY262983; Name=DY262983; organism=Citrus clementina; type=EST; length=1319bp
CTCCGAAAACATAGCCTCGATTTACAATAAACAAATAAATGTATTTTTTA
TAATTAATTATTTCTTCAGCTATTTGATTCTCCTCAATTTCTCGTCTTCA
ATCCGGCCGGCTCAGCTCGATCCGGACTGTTGCTTTTAATTGCGTCCAAT
CACAAGCGACCGACTGTTTTGATTGAAGATGAGGAGAATTGCGGGATCTG
CTCGCTACTTTCGATCAGCTCTGTGGCATCGCAAATTTGATTATTGGAGT
AGTTTTACGACAAGGCCCAAGGATTTGACAGAGAATTATCATAATTGTGC
TTACGGGGTTACTAATAATGCTGAAATTGAAAGTTTTTTACGTTCAAAAT
TTATGGTCTCAAGAGCTCTGTCAACGGATGCTGCTGCTAGCGCTTCCATT
GGAGAAGTACATAGAGCAGCTGCAGGGCCTCTTGTGGAGTATGAGCGAAG
AATTATCGCGGGTGAGCTTTTGGATGGTGACGTCCGTCAGTTAGGAACGT
TAGAAGAACTTCAAAGACTATATGATGAGCTTGTTGAATCAGCTGATGCC
TGTAAGTTAGATCGCTATTCATCTTCTGAGAAATCTGGAAGGAGTCGGTG
GCTGTGGTCACGTTTACTGCCACAATCTTCATACTCACCTGTCAAAGGAT
TGTACCTTTATGGGGGAGTAGGGACTGGGAAAACAATGTTGATGGACCTA
TTTTTTTATCAATTGCCCTGCAATTGGAGAAAGAAGAGGATCCATTTTCA
TGACTTCATGTTGAATGTCCACAGCCGCTTGCAAAAGCACAAGGGTGTAT
CAGATCCGCTTGAAGTTGTTGCAGGAGAGATATCAGATGAGGCTATTTTA
TTATGTGTGGATGAGTTTATGGTGACTGATGTTGCTGATGCATTGATACT
TAATCGTCTGTTTAGACATCTATTCCACAATGGTGTTATACTGGTTTTCA
CTTCAAACCGTGCTCCGGACATTCTATATGAACGGGAATTACAAAGGGAT
CTTTTTCTACCATTTATTCCACTTTGAAAGGAAAAAGGTGTTGTCCACAA
ATTTTGGCTCACAATAAACTAAAGAAAAATGACTTCGGTTCCAAAGGGTT
CTACTTTTGTGGGAAAGGGTTCACCAAAAATTATGAAAACAAAAATTTTG
GGGAACTTGATTGGGGAAAAATGAAAGGCGGGGCCAAACGGAAAGGGGGA
AAAAAAGTGAGGGGGAAAAGGAAAATTTTGCGGGTTTTCCTTTGGGGGGG
GGTTATAAGGGAAGGGGTGTCCCAAAATTTTTGTTAAATATTTAATAAAG
GAAGAAAACCTTTGTTGAG
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