DY263034

Overview
NameDY263034
Unique NameDY263034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1259
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY263034 vs. ExPASy Swiss-Prot
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.650e-34
Identity = 97/215 (45.12%), Postives = 113/215 (52.56%), Query Frame = 1 
Query:  271 QKRRWGSCWSLYWCFGSHKTSKRISHAVLLPE------PMVXXXXXXXXXXXXXXXXIVLPFIXXXXXXXXFLQSDPSSATQSPAGLLSLNSLSVNAYSPGGPAS-MFAIGPYAHETQLVTPPVFSAFTTEPSTALCTPPPESVQLTTPSSPEVPFAQLLTSSLERARRNSGTNQKLSLSHYG--YQPYQLYPGSPGGQLISPGSVVSYSGTSSP 888
            Q++RWG C  ++ CF S K  KRI  A  +PE                         I L  +        F  S   S TQSP   LSL      A SPGGP+S M+A GPYAHETQLV+PPVFS FTTEPSTA  TPPPE  +LT PSSP+VP+A+ LTSS++   +NSG        HY      Y LYPGSP   L SP S  S  G  SP
Sbjct:    7 QRKRWGGCLGVFSCFKSQKGGKRIVPASRIPEGGNVSASQPNGAHQAGVLNNQAAGGINLSLLAPPSSPASFTNSALPSTTQSPNCYLSLA-----ANSPGGPSSSMYATGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPELARLTAPSSPDVPYARFLTSSMD--LKNSGK------GHYNDLQATYSLYPGSPASALRSPISRASGDGLLSP 208
The following BLAST results are available for this feature:
BLAST of DY263034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1666_ARATH2.650e-3445.12Uncharacterized protein At1g76660 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10CE10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263034 ID=DY263034; Name=DY263034; organism=Citrus clementina; type=EST; length=1259bp
AATAAAACATATAAACTCACCGTTTCGTAATAATTCTTTTGCTCTTCGTT
TTTTCAACCAAATCTTTGAAATACTTGAAAAAGCGGAAAGCTTTCGTTTG
GAGATCCAAACGGAAGCTGTAGATGTTATTACACAACTCGTTTGTGCCGT
CGTTTCATGTTTTGAAAATTTGAAAACAAGATGAGTAGTGTTCACGACAG
CGTCGAGACCGTTAACGCCGCTGCAACTGCCATAGTTTCAGCTGAGTCCC
GCCTCCGGCCAGCCGCGATTCAGAAAAGAAGATGGGGAAGCTGTTGGAGC
CTCTACTGGTGTTTTGGATCTCATAAAACTAGCAAGCGGATTAGCCATGC
TGTCCTTCTTCCTGAACCAATGGTAACAGGAGCCGCAGCCCCAGCTGCAG
AAACTCAAGCCCACTCAACAGCCATTGTACTTCCCTTCATTGCTCCTCCC
TCTTCTCCTGCATCGTTCCTCCAATCAGACCCTTCATCTGCCACCCAATC
ACCTGCTGGATTGCTTTCCCTCAATTCCCTTTCTGTCAACGCCTATTCTC
CTGGTGGACCTGCATCCATGTTTGCCATAGGCCCATATGCTCACGAAACA
CAGTTAGTTACACCACCTGTGTTTTCTGCCTTCACCACTGAACCATCTAC
TGCCCTTTGCACCCCCCCTCCCGAATCTGTTCAATTGACAACTCCTTCAT
CTCCGGAAGTGCCATTTGCTCAACTGTTGACATCTTCACTGGAACGTGCT
CGAAGAAACAGCGGGACTAATCAGAAGCTCTCATTATCCCATTATGGATA
CCAGCCTTATCAGCTGTACCCAGGAAGCCCAGGTGGTCAACTCATATCAC
CAGGTTCAGTAGTCTCTTACTCTGGCACTTCGTCTCCTTTCCCGATAGAC
ACCCGATTCTTGATTTCAGTGCGGCGGCGGCACCCAAGCTCTTGGGCTTT
GAACATTTTACTACTCGCAGGTGGGGGTCGAGGCTAGGTTCCGGATCTGT
GACTCCCGATGGTGGGGGGAATTGGTTCAAGAATGGGGTTCGGGCTCTTT
AACGCCTGAGGGCGGGGGGCCTGGGTTCAGGGTGGGGCCTCGGGAACTGG
AAAACCCCGGAGGGGGGAGGGCTGGGGTTCAGGGCTGGGGTTAGGGAATT
TTTAAACCCGGGGAGGAAAGGGGTCCCAAACCCCCAAAAAAAGGGGATTT
TGTGGCGGGGAAAAAAAAAAATTTTGTGAAGGGGGGGGACCCCCCCTTTG
CCCAATTTC
back to top