DY263050

Overview
NameDY263050
Unique NameDY263050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY263050_ssr7 microsatellite DY263050_ssr7:7..18. BLAST: Citrus ESTs to Prunus persica proteins V1
DY263050_ssr940 microsatellite DY263050_ssr940:940..951. BLAST: Citrus ESTs to Prunus persica proteins V1
DY263050_ssr126 microsatellite DY263050_ssr126:126..137. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.275e-57
Identity = 102/134 (76.12%), Postives = 121/134 (90.30%), Query Frame = 3
Query:  300 CGVWSRACSKEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            C VW++ACS E++ L  +P+ V WL+ VRRTIH+NPELAF+E+ETSRL+R+ELDRM I Y+YPLAKTGIRAW+G+GGPPFVA+RADMDALPIQEAVEWE+ SKVAGKMHACGHDAHV ML+GAA ILK+REHLL
Sbjct:   65 CRVWTKACSDEILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAGKMHACGHDAHVTMLLGAAHILKAREHLL 198          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.849e-46
Identity = 88/125 (70.40%), Postives = 107/125 (85.60%), Query Frame = 3
Query:  327 KEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            +E+  +A RPET  WLR+VRR IH+ PELA++E ETSRL+R ELD M +G+++P+A+TG+ A +GTG PP VALRADMDALPIQEAVEWE+KSK  GKMHACGHDAHVAML+GAAKILK+REH L
Sbjct:   97 EEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHL 221          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 6.794e-43
Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 3
Query:  330 EVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL+ + I Y+YP+A TG+  ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGHD HV ML+GAAKIL    H L
Sbjct:   37 KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHL 160          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.513e-42
Identity = 82/124 (66.13%), Postives = 100/124 (80.65%), Query Frame = 3
Query:  330 EVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            +V++ ARRPE   W+  VR  IH+ PELAF+E ETSRL+RAELD M + Y++P+A TG+ A VGTG PPFVALRADMDALP+QE V+WE+KSKVA KMHACGHDAH  ML+GAA+IL+ R H L
Sbjct:   49 DVLDRARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTGRPPFVALRADMDALPMQEEVQWEHKSKVAMKMHACGHDAHTTMLLGAARILQERRHEL 172          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 1.281e-41
Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 3
Query:  288 PFSSCGVWSRACSKE-----VMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            P SS G +      E     ++  A+ PE  +W+R +RR IH+NPE  FQEF+TS+L+R ELD + + YKYP+AKTG+ AW+G+   P   LRADMDALP+QE VEWE KSKV GKMHACGHD HVAML+GAAK+L++ +HL+
Sbjct:   19 PLSSAGSYDSGSGLESLARGMLHSAKDPEFFEWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWESKSKVDGKMHACGHDTHVAMLLGAAKLLQTTKHLI 161          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.854e-41
Identity = 80/122 (65.57%), Postives = 101/122 (82.79%), Query Frame = 3
Query:  336 MELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS-REHL 698
            +ELA+ PE  D +  +RR IH+NPEL ++EFETS+ +R+ELD + + Y++P+A TGI  ++GTG PPFVALRADMDALPIQEAVEWE+KSK  GKMHACGHD HVAML+GAAKIL+  R+HL
Sbjct:   38 LELAKSPEVFDSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDGHVAMLLGAAKILQQHRQHL 159          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.085e-40
Identity = 76/125 (60.80%), Postives = 97/125 (77.60%), Query Frame = 3
Query:  327 KEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            K  + LA+R +  DW+  +RR IH+NPEL ++E ETS+L++ ELD+M + YK P+A TG+  +VGTG  PFVALRADMDALPIQE VEWE+KSK+ GKMHACGHDAH  ML+GAAK+LK  +  L
Sbjct:   33 KNFLSLAKREDFFDWMVGIRRRIHENPELGYEEVETSKLVKTELDKMGVSYKNPVAVTGVIGYVGTGHAPFVALRADMDALPIQEMVEWEHKSKIPGKMHACGHDAHTTMLLGAAKLLKEHQEEL 157          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 1.417e-40
Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 3
Query:  336 MELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLL 701
            + LA+R +  DW+  +RR IH+NPEL ++E ETS+L+RAEL++M + YKYP+A TG+  +VGTG  PFVALRADMDAL +QE VEWE+KSKV GKMHACGHDAH  ML+GAAK+LK  E  L
Sbjct:   36 LTLAKRNDFFDWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEEL 157          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 7.773e-39
Identity = 74/117 (63.25%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  333 VMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILK 683
            ++  A+  E   W+  +RR IH+NPEL ++EF TS L+R ELD + I Y++P A TG+ A VGTGGPPFVALRADMDALP+QE+VEWE+KSKV GKMH CGHDAHVAML+G+A+IL+
Sbjct:   36 LLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQ 152          
BLAST of DY263050 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 7.773e-39
Identity = 74/117 (63.25%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  333 VMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILK 683
            ++  A+  E   W+  +RR IH+NPEL ++EF TS L+R ELD + I Y++P A TG+ A VGTGGPPFVALRADMDALP+QE+VEWE+KSKV GKMH CGHDAHVAML+G+A+IL+
Sbjct:   36 LLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQ 152          
The following BLAST results are available for this feature:
BLAST of DY263050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ILL6_ARATH1.275e-5776.12IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL6_ORYSJ3.849e-4670.40IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL2_ARATH6.794e-4362.90IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL2_ORYSJ1.513e-4266.13IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILR1_ARATH1.281e-4155.94IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL1_ARATH2.854e-4165.57IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL5_ARATH1.085e-4060.80IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL4_ARATH1.417e-4063.11IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL1_ORYSJ7.773e-3963.25IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI7.773e-3963.25IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CG02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263050 ID=DY263050; Name=DY263050; organism=Citrus clementina; type=EST; length=1240bp
ATTATTTCTCTCTCTCTCTGGGTGTGTTCCTTCTCCATTTGTTTTTTTTC
ACTCTCATCACTTTCTCTGCAAACATGAAGCTTCAAAAACTCTCTGTGGC
GTTTAAAATCTTGAGCTTCAATTTAATTATTATTATTCTCCTGCAAGTTG
AATCCTTAACGCCGGCGAACAACGACTACGCTTTCTTTGACATAAACTCG
TTGGGCTCATCAACAATAGCAGCAACAACGCCGGCTTGGAAACCCGACGG
CGGCAGCGTCAAGAACCGATCGTCGACGTCACGGAAGCCGTTTTCGAGCT
GCGGAGTGTGGAGCAGGGCGTGCTCGAAGGAGGTGATGGAGCTGGCGCGG
CGGCCGGAGACGGTGGATTGGCTGAGGAGTGTGAGGAGAACGATTCATCA
GAATCCGGAGCTTGCTTTTCAAGAATTTGAAACCAGCAGGCTCTTGAGGG
CCGAGTTGGATCGGATGGAGATTGGATACAAATACCCGTTGGCCAAAACA
GGTATCCGGGCATGGGTCGGGACAGGCGGACCGCCGTTTGTTGCCCTCAG
AGCTGACATGGATGCACTTCCGATTCAGGAAGCCGTCGAGTGGGAATACA
AAAGCAAAGTGGCTGGCAAAATGCATGCCTGTGGACACGATGCGCACGTT
GCCATGCTCATCGGTGCGGCCAAGATCTTGAAGAGCCGCGAACATCTTTT
AAAGGTTTGAAAAGAAAAAAAAAATTATTAAAAAAAGAAGAAGATAAATG
CCCTTCTTTGTTTGAATTGATGGTTTTTTTTTTTTAACATCATTTTTGTT
TAGTACTTCAGAAGCTTTTTGCACATTGGTTTTCTCTCTGCATGGATGTC
CAATTTGGAGATGAATTATTGCACTTTATGAAATGAAACTAGGGGTGGTG
GCATTAACGTAACTGTTATAGGCAATTGAAAAAGAATAATGTGTGTGTGT
GTAGGAACGGTGGCTTTTCTTTTTTGTTAAAGAACTGAAATTTGTAGGGG
CAGAAAATGCTTCTCAAAAATGTCCGGGGGGGGAAAAAAAAAATGGGGCC
TCTAAATTAAATTTTCATTTTTTAGCCCGCAGGGGGGCCTTCCAAAAAAA
AGGGTTCTTTTTGGTTTGCCAACCCAAAACCTTTCTGGGTCTTTTTTTCA
AATTGCCTTTCCCCTAAAGGGGGGAAAAAGCTTAAAATCCCCATATTGAA
AAAAAGGGGGGGGGGGGTTTTAAATATTTTTTTTTTTTTT
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