DY263060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 2.126e-136 Identity = 242/276 (87.68%), Postives = 260/276 (94.20%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAP 959 MIT ADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFI++N+PY MNLRF+AAD+LQK+IVL +L +W KLS+ G L+WTITLFS+STLPNTLVMGIPLLKGMYG FSG LMVQIVVLQCIIWYTLMLF+FEYRGA+LLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLET+AEIKEDGKLHVTVR+SNASRSDI+SRRSQGLS+ TPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSMMA GGR+S P Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPLLKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSA-TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMASGGGRNSNFGP 275
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1) HSP 1 Score: 471.855 bits (1213), Expect = 1.268e-132 Identity = 234/274 (85.40%), Postives = 257/274 (93.80%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQP-LETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSTSA 956 MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK+IVL +L +WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTAG+I SI VD+D++SLDGR+ +ET+AE+KEDGK+HVTVR+SNASRSD++SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+ GRSS A Sbjct: 1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDADVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSSNFA 272 HSP 2 Score: 23.483 bits (49), Expect = 1.268e-132 Identity = 16/51 (31.37%), Postives = 20/51 (39.22%), Query Frame = 2 Query: 947 NFGATDVYGLSATSRGTTPXXXXXXXXXXXXXXXG--FLPTPAPNPGMFSP 1093 NF A D +G+ G TP G + PAPNP M +P Sbjct: 270 NFAAGDAFGVRT---GATPRPSNYEEDAAAPNKAGSKYGQYPAPNPAMAAP 317
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1) HSP 1 Score: 464.537 bits (1194), Expect = 5.071e-130 Identity = 230/271 (84.87%), Postives = 252/271 (92.99%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQ-PLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSS 947 MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK++VL +L WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTA +I SI VD D++SLDGR+ +ET+ E+KEDG++HVTVR+SNASRSDI+SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+ GRSS Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIVVDPDVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSS 269
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2) HSP 1 Score: 397.512 bits (1020), Expect = 7.613e-110 Identity = 204/295 (69.15%), Postives = 238/295 (80.68%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAPLTCMVSRRRRVEPPPKHPN 1016 MIT D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFISSN+PY MNLRFIAADTLQK+I+L +L IW+ ++ G LEW+IT+FS+STLPNTLVMGIPLL MYGE+SGSLMVQIVVLQCIIWYTL+LF+FEYRGA++LI EQFP+T SIVS V+SD++SLDG LETDA+I +DGKLHVTVRKSNASR + G ++ TPRPSNLT AEIYSL N TPRGS+FNH+DFYSMM GGR S P M S + P P+ N Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFY---GGGGTNMTPRPSNLTGAEIYSL----NTTPRGSNFNHSDFYSMMGFPGGRLSNFGPAD-MYSVQSSRGPTPRPSN 287
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 1.875e-108 Identity = 199/276 (72.10%), Postives = 227/276 (82.25%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAP 959 MIT D Y V+TA+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AADTLQKII+LV+LA+W+ L+K G LEW IT+FS+STLPNTLVMGIPLL MYG ++GSLMVQ+VVLQCIIWYTL+LF+FEYRGA+LLI EQFP+T SIVS V+SD++SLDG LETDAEI DGKLHVTVRKSNASR + TPRPSNLT AEIYSL S TPRGS+FNH+DFYS+M GGR S P Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRSLM---------MTPRPSNLTGAEIYSLSS----TPRGSNFNHSDFYSVMGFPGGRLSNFGP 263
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2) HSP 1 Score: 390.193 bits (1001), Expect = 1.215e-107 Identity = 194/274 (70.80%), Postives = 227/274 (82.85%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFS---RRSQGLSST--TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRS 944 MIT D Y V+ AMVPLYVAMILAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFISSNDPY MN F+AAD+LQK+++L L +W S+RG LEW ITLFS+STLPNTLVMGIPLL+ MYG+FSG+LMVQIVVLQ IIWYTLMLF+FE+RGA+LLISEQFP+TAGSI S VDSD++SL+GR+PL+TDAEI +DGKLHV VR+S+A+ S I S GL+S+ TPR SNLT EIYS+QSSR PTPR SSFN DFY+M ++ Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSDVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKA 274
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1) HSP 1 Score: 389.808 bits (1000), Expect = 1.587e-107 Identity = 202/295 (68.47%), Postives = 238/295 (80.68%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAPLTCMVSRRRRVEPPPKHPN 1016 MI+ D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+N+PY MNLRFIAADTLQKII+L +L +W+ ++ G LEW+IT+FS+STLPNTLVMGIPLL MYGE+SGSLMVQIVVLQCIIWYTL+LF+FE+RGA++LI EQFP+TA SIVS V+SD++SLDG LETDAEI +DGKLHVTVRKSNA SRRS + TPRPSNLT AEIYSL + TPRGS+FNH+DFY+MM GGR S P M S + P P+ N Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAASIVSFKVESDVVSLDGHDFLETDAEIGDDGKLHVTVRKSNA------SRRSFCGPNMTPRPSNLTGAEIYSLST----TPRGSNFNHSDFYNMMGFPGGRLSNFGPAD-MYSVQSSRGPTPRPSN 284
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 1.486e-105 Identity = 193/270 (71.48%), Postives = 226/270 (83.70%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKL-SKRGC--LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGG 938 MI+ DFY VM A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MNLRF+AADTLQK++VL LA WS+L S+ G L+W+ITLFS+STLPNTLVMGIPLL MYG +SGSLMVQIVVLQCIIWYTLMLF+FE+R AR+LI++QFPDTA SIVS+HVD D++SL+G ET+AE+ DG+LHVTVR+S+ SR + TPRPSNLT AEIYSL SSRNPTPRGS+FNHADF++M+ GG Sbjct: 1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHVDPDVVSLEGGH-AETEAEVAADGRLHVTVRRSSVSRRSLL---------VTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGG 260
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 5.646e-105 Identity = 194/278 (69.78%), Postives = 230/278 (82.73%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEF----SGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSL----DGRQPLETDAEIKEDGKLHVTVRKSNASRSD-IFSRRSQGLS-STTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGR 941 MIT+ D YHV+TA+VPLYVAM LAY SV+WW+IF+PDQCSGINRFVALFAVPLLSFHFIS+N+P+ MNLRF+AADTLQK+IVL +LA+W +LS RG L+W ITLFS+STLPNTLVMGIPLLKGMY SGSLMVQIVVLQCIIWYTLMLF+FEYRGARLL+ EQFPDTA SIVS VDSD++SL G L+ +AE+ +DG++ VTVRKS +SRS+ S +Q S S PR SNL+ EIYSLQSSRNPTPRGSSFNHA+F++++ G+ Sbjct: 1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFISTNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPLLKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIVSFRVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQPRVSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGK 278
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 1.218e-99 Identity = 184/290 (63.45%), Postives = 222/290 (76.55%), Query Frame = 3 Query: 138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKR--------GCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQF-PDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKS----------NASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSST 950 MIT D Y V+ A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AAD+LQK+++L LA+W L R L+WTITLFS+STLPNTLVMGIPLL+ MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRGA+ LISEQF PD SI S VDSD++SL+GR+ L+ DAE+ DG++HV +R+S A+RS + SR ++ TPR SNLT EIYSLQ+SR PTPR SSFN ADFY+M +G + ++ Sbjct: 1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISTNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGASIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGV-SRAYGASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMAS 289 The following BLAST results are available for this feature:
BLAST of DY263060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263060 ID=DY263060; Name=DY263060; organism=Citrus clementina; type=EST; length=1148bpback to top |