DY263060

Overview
NameDY263060
Unique NameDY263060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY263060_ssr37 microsatellite DY263060_ssr37:37..48. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 485.723 bits (1249), Expect = 2.126e-136
Identity = 242/276 (87.68%), Postives = 260/276 (94.20%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAP 959
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFI++N+PY MNLRF+AAD+LQK+IVL +L +W KLS+ G L+WTITLFS+STLPNTLVMGIPLLKGMYG FSG LMVQIVVLQCIIWYTLMLF+FEYRGA+LLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLET+AEIKEDGKLHVTVR+SNASRSDI+SRRSQGLS+ TPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSMMA  GGR+S   P
Sbjct:    1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPLLKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSA-TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMASGGGRNSNFGP 275          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1)

HSP 1 Score: 471.855 bits (1213), Expect = 1.268e-132
Identity = 234/274 (85.40%), Postives = 257/274 (93.80%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQP-LETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSSTSA 956
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK+IVL +L +WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTAG+I SI VD+D++SLDGR+  +ET+AE+KEDGK+HVTVR+SNASRSD++SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+  GRSS  A
Sbjct:    1 MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDADVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSSNFA 272          

HSP 2 Score: 23.483 bits (49), Expect = 1.268e-132
Identity = 16/51 (31.37%), Postives = 20/51 (39.22%), Query Frame = 2
Query:  947 NFGATDVYGLSATSRGTTPXXXXXXXXXXXXXXXG--FLPTPAPNPGMFSP 1093
            NF A D +G+     G TP               G  +   PAPNP M +P
Sbjct:  270 NFAAGDAFGVRT---GATPRPSNYEEDAAAPNKAGSKYGQYPAPNPAMAAP 317          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 464.537 bits (1194), Expect = 5.071e-130
Identity = 230/271 (84.87%), Postives = 252/271 (92.99%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQ-PLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSS 947
            MIT ADFYHVMTAMVPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFIS+N+PY MNLRFIAADTLQK++VL +L  WS LS+RG LEWTITLFS+STLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAR+LI+EQFPDTA +I SI VD D++SLDGR+  +ET+ E+KEDG++HVTVR+SNASRSDI+SRRS G SSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNH DFYSM+  GRSS
Sbjct:    1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPDTAANIASIVVDPDVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMV--GRSS 269          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 7.613e-110
Identity = 204/295 (69.15%), Postives = 238/295 (80.68%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAPLTCMVSRRRRVEPPPKHPN 1016
            MIT  D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFISSN+PY MNLRFIAADTLQK+I+L +L IW+  ++ G LEW+IT+FS+STLPNTLVMGIPLL  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FEYRGA++LI EQFP+T  SIVS  V+SD++SLDG   LETDA+I +DGKLHVTVRKSNASR   +     G ++ TPRPSNLT AEIYSL    N TPRGS+FNH+DFYSMM   GGR S   P   M S +    P P+  N
Sbjct:    1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFY---GGGGTNMTPRPSNLTGAEIYSL----NTTPRGSNFNHSDFYSMMGFPGGRLSNFGPAD-MYSVQSSRGPTPRPSN 287          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.875e-108
Identity = 199/276 (72.10%), Postives = 227/276 (82.25%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAP 959
            MIT  D Y V+TA+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AADTLQKII+LV+LA+W+ L+K G LEW IT+FS+STLPNTLVMGIPLL  MYG ++GSLMVQ+VVLQCIIWYTL+LF+FEYRGA+LLI EQFP+T  SIVS  V+SD++SLDG   LETDAEI  DGKLHVTVRKSNASR  +           TPRPSNLT AEIYSL S    TPRGS+FNH+DFYS+M   GGR S   P
Sbjct:    1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETGASIVSFKVESDVVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRSLM---------MTPRPSNLTGAEIYSLSS----TPRGSNFNHSDFYSVMGFPGGRLSNFGP 263          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2)

HSP 1 Score: 390.193 bits (1001), Expect = 1.215e-107
Identity = 194/274 (70.80%), Postives = 227/274 (82.85%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFS---RRSQGLSST--TPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRS 944
            MIT  D Y V+ AMVPLYVAMILAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFISSNDPY MN  F+AAD+LQK+++L  L +W   S+RG LEW ITLFS+STLPNTLVMGIPLL+ MYG+FSG+LMVQIVVLQ IIWYTLMLF+FE+RGA+LLISEQFP+TAGSI S  VDSD++SL+GR+PL+TDAEI +DGKLHV VR+S+A+ S I S       GL+S+  TPR SNLT  EIYS+QSSR PTPR SSFN  DFY+M    ++
Sbjct:    1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSDVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKA 274          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 1.587e-107
Identity = 202/295 (68.47%), Postives = 238/295 (80.68%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMA--GGRSSTSAPLTCMVSRRRRVEPPPKHPN 1016
            MI+  D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS+N+PY MNLRFIAADTLQKII+L +L +W+  ++ G LEW+IT+FS+STLPNTLVMGIPLL  MYGE+SGSLMVQIVVLQCIIWYTL+LF+FE+RGA++LI EQFP+TA SIVS  V+SD++SLDG   LETDAEI +DGKLHVTVRKSNA      SRRS    + TPRPSNLT AEIYSL +    TPRGS+FNH+DFY+MM   GGR S   P   M S +    P P+  N
Sbjct:    1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFPETAASIVSFKVESDVVSLDGHDFLETDAEIGDDGKLHVTVRKSNA------SRRSFCGPNMTPRPSNLTGAEIYSLST----TPRGSNFNHSDFYNMMGFPGGRLSNFGPAD-MYSVQSSRGPTPRPSN 284          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 1.486e-105
Identity = 193/270 (71.48%), Postives = 226/270 (83.70%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKL-SKRGC--LEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGG 938
            MI+  DFY VM A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MNLRF+AADTLQK++VL  LA WS+L S+ G   L+W+ITLFS+STLPNTLVMGIPLL  MYG +SGSLMVQIVVLQCIIWYTLMLF+FE+R AR+LI++QFPDTA SIVS+HVD D++SL+G    ET+AE+  DG+LHVTVR+S+ SR  +           TPRPSNLT AEIYSL SSRNPTPRGS+FNHADF++M+ GG
Sbjct:    1 MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFISTNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHVDPDVVSLEGGH-AETEAEVAADGRLHVTVRRSSVSRRSLL---------VTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGG 260          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 5.646e-105
Identity = 194/278 (69.78%), Postives = 230/278 (82.73%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKRGCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEF----SGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQFPDTAGSIVSIHVDSDIMSL----DGRQPLETDAEIKEDGKLHVTVRKSNASRSD-IFSRRSQGLS-STTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGR 941
            MIT+ D YHV+TA+VPLYVAM LAY SV+WW+IF+PDQCSGINRFVALFAVPLLSFHFIS+N+P+ MNLRF+AADTLQK+IVL +LA+W +LS RG L+W ITLFS+STLPNTLVMGIPLLKGMY       SGSLMVQIVVLQCIIWYTLMLF+FEYRGARLL+ EQFPDTA SIVS  VDSD++SL     G   L+ +AE+ +DG++ VTVRKS +SRS+   S  +Q  S S  PR SNL+  EIYSLQSSRNPTPRGSSFNHA+F++++  G+
Sbjct:    1 MITVVDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFISTNNPFAMNLRFLAADTLQKLIVLALLALWCRLSARGSLDWLITLFSLSTLPNTLVMGIPLLKGMYAAAADVDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLVMEQFPDTAASIVSFRVDSDVVSLAGGGGGAAELQAEAEVGDDGRMRVTVRKSTSSRSEAACSHGTQSHSQSMQPRVSNLSGVEIYSLQSSRNPTPRGSSFNHAEFFNIVGNGK 278          
BLAST of DY263060 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 1.218e-99
Identity = 184/290 (63.45%), Postives = 222/290 (76.55%), Query Frame = 3
Query:  138 MITLADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISSNDPYKMNLRFIAADTLQKIIVLVVLAIWSKLSKR--------GCLEWTITLFSVSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARLLISEQF-PDTAGSIVSIHVDSDIMSLDGRQPLETDAEIKEDGKLHVTVRKS----------NASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHADFYSMMAGGRSST 950
            MIT  D Y V+ A+VPLYVAM LAYGSV+WW IFTPDQCSGINRFVA+FAVPLLSFHFIS+NDPY MN RF+AAD+LQK+++L  LA+W  L  R          L+WTITLFS+STLPNTLVMGIPLL+ MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRGA+ LISEQF PD   SI S  VDSD++SL+GR+ L+ DAE+  DG++HV +R+S           A+RS + SR     ++ TPR SNLT  EIYSLQ+SR PTPR SSFN ADFY+M +G + ++
Sbjct:    1 MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFISTNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGASIASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGV-SRAYGASNAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMAS 289          
The following BLAST results are available for this feature:
BLAST of DY263060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PINI_ARATH2.126e-13687.68Auxin efflux carrier component 1 OS=Arabidopsis th... [more]
PIN1C_ORYSJ1.268e-13285.40Probable auxin efflux carrier component 1c OS=Oryz... [more]
PIN1_ORYSJ5.071e-13084.87Auxin efflux carrier component 1 OS=Oryza sativa s... [more]
PIN7_ARATH7.613e-11069.15Auxin efflux carrier component 7 OS=Arabidopsis th... [more]
PIN4_ARATH1.875e-10872.10Auxin efflux carrier component 4 OS=Arabidopsis th... [more]
PIN2_ARATH1.215e-10770.80Auxin efflux carrier component 2 OS=Arabidopsis th... [more]
PIN3_ARATH1.587e-10768.47Auxin efflux carrier component 3 OS=Arabidopsis th... [more]
PIN3A_ORYSJ1.486e-10571.48Probable auxin efflux carrier component 3a OS=Oryz... [more]
PIN1B_ORYSJ5.646e-10569.78Probable auxin efflux carrier component 1b OS=Oryz... [more]
PIN2_ORYSJ1.218e-9963.45Probable auxin efflux carrier component 2 OS=Oryza... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10CG12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263060 ID=DY263060; Name=DY263060; organism=Citrus clementina; type=EST; length=1148bp
TTTTCCTCTCATCTTCGTTGTCACTTCCACCAATATTTCTTCTTCTTCAA
CCCCCCACCCTTCTCTCTTTCTTGTTTCTTCTTTGATTGCTAAGTTTTGT
TAATTCATTCAATTAGTATCGTTGCAAGTAACCAAAGATGATCACACTCG
CAGACTTTTACCATGTCATGACTGCAATGGTTCCACTTTATGTGGCCATG
ATCTTAGCTTATGGGTCAGTGAAATGGTGGAAGATTTTCACTCCTGATCA
GTGCTCAGGCATCAACCGTTTTGTTGCTCTCTTTGCAGTCCCCTTGCTCT
CTTTCCATTTCATCTCATCCAACGACCCTTACAAAATGAACTTGAGGTTC
ATTGCAGCTGATACTCTTCAAAAAATCATAGTCCTTGTGGTTCTAGCAAT
TTGGAGCAAGTTGAGCAAAAGGGGTTGTTTAGAATGGACCATCACTCTAT
TTTCAGTATCAACTTTACCAAACACTCTAGTCATGGGCATTCCTTTACTC
AAAGGAATGTACGGCGAGTTCTCTGGAAGCTTGATGGTGCAAATAGTTGT
TCTTCAATGCATCATTTGGTACACTTTGATGTTATTCATGTTTGAATATA
GAGGTGCCAGGTTGCTTATCTCTGAGCAATTCCCAGACACTGCTGGCTCT
ATTGTCTCAATACATGTTGATTCTGACATCATGTCACTTGATGGAAGGCA
GCCACTTGAAACAGACGCTGAGATCAAAGAAGATGGAAAGCTTCATGTCA
CTGTCCGAAAATCAAATGCCTCAAGATCAGACATTTTCTCAAGAAGGTCT
CAAGGGCTGTCGTCAACAACTCCACGCCCATCAAACTTAACGAATGCAGA
GATTTACTCTTTGCAGTCATCAAGAAACCCAACACCACGAGGGTCAAGCT
TTAACCACGCTGACTTTTACTCAATGATGGCCGGTGGCCGCAGTTCAACT
TCGGCGCCACTGACGTGTATGGTCTCTCGGCGACGTCGCGTGGAACCACC
CCCAAAACATCCAAATATAAAAAGAAGCTAAAAATGCTAAAAAAGTAAGG
GTTCCTCCCTACCCCGGCACCAAATCCGGGGATGTTTTCTCCCACTAAAA
AATAATACTAAAAATTAAAGGCCCTGGGCAAAAAAAAAAGGAAATTAA
back to top