DY263077

Overview
NameDY263077
Unique NameDY263077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1344
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.229e-18
Identity = 43/90 (47.78%), Postives = 64/90 (71.11%), Query Frame = 2
Query:  146 IRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD 415
            + A+V   T   D EL++  PKL+I++ ++VG D +D+ +  ++G+ VTNTP VLTD  ADLA  L+LAV RR+ E+D +VRSG+WKK +
Sbjct:   46 VDALVTLVTDKVDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSE 135          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.966e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 2
Query:  119 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            + L  +  ++ A+V   +   DAE+ DA P+L+IV++++VG D +D+ +  + GV +TNTPDVLT+  AD+A  L+LA  RRL E+D++VRSG+WKK
Sbjct:   37 EVLLEKVRDVDALVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKK 133          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.470e-18
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  152 AVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWK 406
            A+V   T   DAE+ +A PKL IV+ ++VG D +DV +  ++G+ VTNTP VLT+  AD A  L++A  RR+ E+DRYVR GKWK
Sbjct:   48 ALVSLLTDPIDAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWK 132          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.464e-17
Identity = 43/97 (44.33%), Postives = 65/97 (67.01%), Query Frame = 2
Query:  119 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            + L  +  ++ A+V   +   D+E+ DA P+L IV++++VG D +DV +   +G+ VTNTPDVLTD  AD A  L+LA  RRL E+D + RSG+WK+
Sbjct:   37 EVLLKKVRDVDALVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKR 133          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.219e-17
Identity = 42/97 (43.30%), Postives = 64/97 (65.98%), Query Frame = 2
Query:  119 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            + L  +   + A+V   +   D E+ +  PKL IV++++VG D +D+ +  ++G+ VTNTPDVLTD  ADLA  L+LA  R + + DR+VRSG+WKK
Sbjct:   37 EILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKK 133          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.490e-17
Identity = 37/76 (48.68%), Postives = 60/76 (78.95%), Query Frame = 2
Query:  182 DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            DAE++DA P L+++S++SVG D +D+ +  ++G+ VT+TP VLTD VA+  +GL+LAV RR+ E+D+ +R+G+W K
Sbjct:   60 DAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDK 135          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.070e-16
Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 2
Query:  119 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            + L  +  ++ A+V   +   D E+ D  P+L IV++++VG D VDV +   +G+ VTNTPDVLT+  AD A  L+LA  RRL E+D + RSG+WK+
Sbjct:   37 EVLLEKVRDVDALVTMLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKR 133          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.070e-16
Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = 2
Query:  119 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            + L  +  ++ A+V   +   D E+ +  P+L IV++++VG D +DV +  ++G+ VTNTP VLTD  ADLA  L+LA  R L + D++ RSG+WKK
Sbjct:   38 EILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKK 134          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.145e-14
Identity = 37/89 (41.57%), Postives = 60/89 (67.42%), Query Frame = 2
Query:  143 NIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 409
            ++ A+V   +   D E+ +  P+L IV++++VG D +DV +   +G+ VTNTPDVLT+  AD A  L+LA  R + + D++VRSG+WK+
Sbjct:   45 DVDALVTMLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKR 133          
BLAST of DY263077 vs. ExPASy Swiss-Prot
Match: TKRA_BACSU (Probable 2-ketogluconate reductase OS=Bacillus subtilis GN=yvcT PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.331e-14
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 2
Query:   77 RFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKW 403
            R+ +++  T+     F K ++       G +    + EL++  PKL++VS+ SVG D  D+   KE+GV  T+TP  L D VADLA  L+L+  RR+ E DR+VR+GKW
Sbjct:   25 RYEVWQEDTLPSDVLFEKLKEAEGLLTSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVVGTHTPYTLDDTVADLAFSLILSSARRVAELDRFVRAGKW 133          
The following BLAST results are available for this feature:
BLAST of DY263077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GYAR_THELI2.229e-1847.78Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_THEON4.966e-1845.36Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_KORCO8.470e-1850.59Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_PYRKO2.464e-1744.33Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRHO3.219e-1743.30Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEPD5.490e-1748.68Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THEGJ6.070e-1643.30Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRAB6.070e-1641.24Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRFU1.145e-1441.57Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
TKRA_BACSU3.331e-1439.45Probable 2-ketogluconate reductase OS=Bacillus sub... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DA07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263077 ID=DY263077; Name=DY263077; organism=Citrus clementina; type=EST; length=1344bp
TTTCAGTTGAATGGAGTCAATCGGTGTCTTGATGGCCTGTCCCATGAACA
CGTACTTAGAGCAGGAACTCGAGAGAAGATTCAATCTTTTCAAGTTCTGG
ACGGTTTCAGACAAAACCCAGTTCCTAAAAGCACAACAAAACAACATACG
TGCGGTTGTCGGGAACGCGACGGCCGGTGCTGACGCTGAACTGATTGATG
CTTTACCTAAGCTTGAGATTGTATCGAGTTTTAGTGTGGGATTGGACAAG
GTTGACGTGGCCAAGTGCAAAGAAAAGGGCGTTAGAGTTACTAACACCCC
TGATGTGTTGACTGATGACGTGGCCGATTTGGCCATTGGGTTGATGTTGG
CTGTGTTGAGGAGGTTGTGTGAGAGCGATAGGTATGTCAGAAGTGGGAAG
TGGAAGAAGGGGGATTATAAGCTGACCACTAAGGTTCGTGTATATTTTGT
TCACTGATTGTAAAAATATGTGGTTGTTGTTGTTGTTTTGTGTATGTATA
TATATATATTTTGGGTGCCTGCGTGTTGGATTTCCATGAATTGGTGGTTG
AAATTGCCTGACTATTGGTCTAACAATTTGTGTCTCTTTGATGCTGCTGG
ATGAAAAAACATTTATCACTCACCGTTTAAAATTTCTGCAGTCTGAAAGT
TAGTACCATAAATTTTGTGTGTTAGATTGTGTACCTATGTAGATTTTGAC
TAAATAGCTTGACAAAATTTGTTTGGAAGACTTGCAAATTTGAGACGATG
GTGGTGTTTATATCGTGATGAGATAGTGGTGTTGATTTCAGTTTTTAAGC
ACTAATTTGTATCAGAATGTTTTGCTTAGTTGTTTCTCTTATTTTTTCCC
CTTCTTAAGAGTTGATTTGTGGGATTTATGTTGTATTTTCGGGGAAGGGT
TGGTTTTTCATTAAGTGGATGTTATCCTTTAAAATGGAAGTTCTCTATTC
TCATACTCCCCTTGTACACTCAAATGGTTTACTTGGTTGCCGAAGGGACA
AAAACCCCAGTGGGGGGACTGAACATGGGCTCTTCCATTGTGGTGGAATT
ACATTTTTGGGGTAAGCCCATGGACTGGGAAGAAAACAAAGGGTTAATGG
AAATTGGAAAAAAACCTTGAAAAACTTTATTTGTTAATCCCCAAGAAAAA
GGGAAAAAAACTTAATGGGGGATTCCCCTTGGGGTAAAAATATGGAAAAA
ATTTTCCCGGTTTAAAATTTTTTTTTTGGGGGGTTTCGGTTTTTTTTTTT
AAAGGGGTGTTGTAAAGAGTTTATTAGGGGGTTTTTTTATTTTGAAAAAC
ACATTTGCCCCCCGCCTACTTTTTTTTTTTTTTTTTTTGTGGTA
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