DY263078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_ARATH (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana GN=DAPF PE=1 SV=1) HSP 1 Score: 419.853 bits (1078), Expect = 1.594e-116 Identity = 224/372 (60.22%), Postives = 257/372 (69.09%), Query Frame = 3 Query: 90 MAITTTRSLSVTPVTRRSATPINXXXXXXXXXXXXXXXXXNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIF-LLHTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEWAGE-NKVFGIGPGKINFMAKNFL 1199 M I ++SV P +RR + + K PS RVSA++ E S SFLD++E+G LHFVKYHGLGNDFILVDNR+S+EP+IT EQA KLCDRNFG+GADGVIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENL GK SFT+HTGAGLIVPEIQDDG+VKVDMG PILKA DVPT LS NK ++VV++EL VDGV WNVTCVSMGNPHC+TFG K G NLKVD LNL EIGPKFEHH +FPARTNTEFVE+ H + RGAGATLACG GA A + ++ +V+ L G + IEW E N ++ GP + F L Sbjct: 1 MEIAAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEK-EYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVD------LPG---GPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSJ (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPF PE=3 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 2.022e-103 Identity = 184/267 (68.91%), Postives = 216/267 (80.90%), Query Frame = 3 Query: 228 PSFRVSASSMSSIHAPESASRTSFLDRRESG-FLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIF-LLHTEDACLGRGAGATLACGNGAWA 1022 P+ R ++M+ + P SA+ +FL+RRES LHFVKY GLGNDFI+VDNR+S P++TPE+A KLCDRNFG+GADGVIF MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENL G SF +HTGAGLI+PEIQ+DGKVKVDMG+PIL D+PT L + K+++VV+++L VDG W VTCVSMGNPHCVTFGTKE + L VD L L++IGPKFEHH +FPARTNTEFVE+ H + RGAGATLACG GA A Sbjct: 38 PTARRCVAAMA-VSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACA 303
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSI (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica GN=DAPF PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 4.504e-103 Identity = 183/267 (68.54%), Postives = 216/267 (80.90%), Query Frame = 3 Query: 228 PSFRVSASSMSSIHAPESASRTSFLDRRESG-FLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIF-LLHTEDACLGRGAGATLACGNGAWA 1022 P+ R ++M+ + P SA+ +FL+RRES LHFVKY GLGNDFI++DNR+S P++TPE+A KLCDRNFG+GADGVIF MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENL G SF +HTGAGLI+PEIQ+DGKVKVDMG+PIL D+PT L + K+++VV+++L VDG W VTCVSMGNPHCVTFGTKE + L VD L L++IGPKFEHH +FPARTNTEFVE+ H + RGAGATLACG GA A Sbjct: 41 PTARRCVAAMA-VSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACA 306
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_TRIEI (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) GN=dapF PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 5.724e-82 Identity = 162/283 (57.24%), Postives = 199/283 (70.32%), Query Frame = 3 Query: 330 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFL-LHTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEWAG-ENKVFGIGPGK 1172 F KYHGLGNDFIL+DNR+ +P +TPEQA +LCDRNFGIGADGVIFA+PGV TDYTMRIFNSDGSEPEMCGNG+RC A+FIAELEN N K + +HTGAG+IVPE+Q DG+V VDMG+P L AS++PT+L AN D VV L+V G W VTCVSMGNPHC+TF V ++LA+IGPKFEH+ VFP RTNTEF+++ + + RGAGATLACG GA AS E+ ++V G L+ IEW+ + K++ GP + Sbjct: 5 FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRIFNSDGSEPEMCGNGIRCLAKFIAELEN-NNKTKYNIHTGAGIIVPELQGDGQVTVDMGQPRLLASEIPTTL-ANADDKVVDQLLEVGGKSWFVTCVSMGNPHCITFVE------DVTAIDLAKIGPKFEHNPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLTQNNERLVTVELPG-GCLE--------IEWSTIDQKIYMTGPAE 270
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF2_ANASP (Diaminopimelate epimerase 2 OS=Anabaena sp. (strain PCC 7120) GN=dapF2 PE=3 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 3.973e-75 Identity = 140/236 (59.32%), Postives = 172/236 (72.88%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLN-GKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFLL-HTEDACLGRGAGATLACGNGAWAS 1025 + F KYHGLGNDFIL+DNR S P ITPE+A ++CDR+FGIGADGVIFA+PG NGTDYTMRIFNSDGSEPEMCGNG+RC A F+A+LE L+ K ++ +HT AG+I P++ DG++KVDMG P L A ++PT+L A D V+ L+V+G W VTCVSMGNPHC+TF V + L IGPKFEHH FP RTNTEF+++ + + RGAG TLACG GA AS Sbjct: 3 IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQLTPDGQIKVDMGLPRLLAGEIPTTLGA-ADGKVINQPLEVEGQTWEVTCVSMGNPHCITFVE------DVAAIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACAS 231
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_SYNY3 (Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803) GN=dapF PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 1.156e-74 Identity = 155/285 (54.39%), Postives = 192/285 (67.37%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIF-LLHTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEW-AGENKVFGIGPGK 1172 L F KYHGLGNDFILVDNR STEP +TP+QA++LCDR+FGIGADGVIFA+PG GTDYTMRIFNSDGSEPEMCGNG+RC A+F+A+LE + K ++ +HT AG+I P++ DG+VKVDMGEP L A +PT+L A + VV L V G W VTCVSMGNPHC+TF VD LNL EIGP FEHH F RTNTEF+++ + RGAG TLACG GA A+ + ++ +V L G + IEW A +N+++ GP + Sbjct: 3 LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQLCDRHFGIGADGVIFALPGQGGTDYTMRIFNSDGSEPEMCGNGIRCLAKFLADLEGVEEK-TYRIHTLAGVITPQLLADGQVKVDMGEPQLLAELIPTTL-APAGEKVVDLPLAVAGQTWAVTCVSMGNPHCLTFVD------DVDSLNLTEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVVAAVLTGRGDRRCTVE------LPG---GNLEIEWSAQDNRLYMTGPAQ 270
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_NOSP7 (Diaminopimelate epimerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapF PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 3.719e-73 Identity = 149/301 (49.50%), Postives = 189/301 (62.79%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLN-GKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFLL-HTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEWAG----------ENKVFGIGPGKINFMAK 1190 + F KYHGLGNDFIL+DNR+S+ P +TPEQA +LCDR+FGIGADGVIFA+PG NGTDYTMRIFNSDGSEPEMCGNG+RC A F+A+LE + K S+ +HT G++ P++ DG VKVDMG P L A ++PT+L A ++ V+ L+V G W VTCV+MGNPHC+TF V + L IGPKFEHH FP R NTEF+++ + + RGAG TLACG GA AS G+L GK +T +E G + +V+ GP + F K Sbjct: 3 IEFTKYHGLGNDFILIDNRSSSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAGFLADLEGQSRNKDSYRIHTLGGVMTPQLLSDGLVKVDMGLPRLLAGEIPTTL-APVEEKVISVPLEVAGKTWEVTCVNMGNPHCITFVE------DVAAIELESIGPKFEHHPAFPQRINTEFIQVVRRDYLKMRVWERGAGITLACGTGACASL------------------VAGVLTGKCDRTATVELPGGPLQIEWSEIDQRVYMTGPAERVFTGK 278
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP6 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapF PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 8.284e-73 Identity = 153/283 (54.06%), Postives = 189/283 (66.78%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQS-FTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFLL-HTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEWAGENKVFGIGP 1166 L F KYHGLGNDFILVDNR S EPR+TPEQA ++CDRNFG+GADGVIFA+PG +DY MRIFNSDGSEPEMCGNG+RC A+F++EL+ G QS + + TGAGLIVP + + G V VDMG LK ++PT+L+ D+ VV+++L+V W VT VSMGNPHC+TF V + LAEIGP FEHH VFP RTNTEFVE+ + + RGAGATLACG GA A+ A + +R+A L G + IEW + +F GP Sbjct: 3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELD--GGAQSRYRIATGAGLIVPTLTETGLVTVDMGPAYLKPVEIPTTLTGTGDR-VVEADLEVGDRPWKVTTVSMGNPHCITFVE------DVAAVPLAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACAT------LVAAVLTGRSDRQATVELPG---GPLQIEWREDGHLFMTGP 267
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_SYNE7 (Diaminopimelate epimerase OS=Synechococcus elongatus (strain PCC 7942) GN=dapF PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 8.284e-73 Identity = 153/283 (54.06%), Postives = 189/283 (66.78%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQS-FTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFLL-HTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEWAGENKVFGIGP 1166 L F KYHGLGNDFILVDNR S EPR+TPEQA ++CDRNFG+GADGVIFA+PG +DY MRIFNSDGSEPEMCGNG+RC A+F++EL+ G QS + + TGAGLIVP + + G V VDMG LK ++PT+L+ D+ VV+++L+V W VT VSMGNPHC+TF V + LAEIGP FEHH VFP RTNTEFVE+ + + RGAGATLACG GA A+ A + +R+A L G + IEW + +F GP Sbjct: 3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELD--GGAQSRYRIATGAGLIVPTLTETGLVTVDMGPAYLKPVEIPTTLTGTGDR-VVEADLEVGDRPWKVTTVSMGNPHCITFVE------DVAAVPLAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACAT------LVAAVLTGRSDRQATVELPG---GPLQIEWREDGHLFMTGP 267
BLAST of DY263078 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP2 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapF PE=3 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 2.040e-71 Identity = 150/292 (51.37%), Postives = 186/292 (63.70%), Query Frame = 3 Query: 324 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGK-QSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIFLL-HTEDACLGRGAGATLACGNGAWASWSHSF*RAAEEKSMSVNREAFGILKGKEKKTMLIEW-AGENKVFGIGPGKINFMAK 1190 L F KY GLGNDFIL+DNR T P +TPEQA +LCDR+FGIGADGVIFA+PG G DYTMRIFNSDGSEPEMCGNG+RC ARFI LE N +++++HT AG+I P ++ D V+VDMGEPIL A+D+PT+L + Q+ V L+V G W VTCVSMGNPHC+TF V + L IG FEHH FP R NTEF+E+ + + RGAG TLACG GA AS ++ +V G L+ IEW A +N ++ GP I+F + Sbjct: 3 LEFTKYQGLGNDFILLDNRQQTTPLVTPEQAIQLCDRHFGIGADGVIFALPGQAGADYTMRIFNSDGSEPEMCGNGIRCLARFIDHLEGGNAPGKTYSIHTLAGMIRPRLETDALVRVDMGEPILTATDIPTTLKDSNGQA-VNQPLEVAGKTWMVTCVSMGNPHCITFVE------DVAAIALEVIGKDFEHHPAFPQRINTEFIEVVRPDYIKMRVWERGAGITLACGTGACASVVAGVLTGHCDRLCTVELPG-GCLQ--------IEWSAADNHIYMTGPAAISFQGQ 278 The following BLAST results are available for this feature:
BLAST of DY263078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263078 ID=DY263078; Name=DY263078; organism=Citrus clementina; type=EST; length=1246bpback to top |