DY263085

Overview
NameDY263085
Unique NameDY263085
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1340
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 2.137e-37
Identity = 85/176 (48.30%), Postives = 101/176 (57.39%), Query Frame = 1
Query:  163 GAGSENPHQLPPIXXXXXXXXXXXXXXXXXXXIRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLPPEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLN 690
            G G    HQLPP+                      GSMA+RAR A IP    PLKCPRCDS+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRNVPVGGGCRRN             ++++ K     N+ S SS           Q  T HQ P  P+L+NL+Q  +G IGLN
Sbjct:   24 GHGLVLSHQLPPLQANPNPNHHHVATSAGLPSRMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRN--NKKGKNGNLKSSSSSSKQSSSVNAQSPSS----------GQLRTNHQFPFSPTLYNLTQ--LGGIGLN 185          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.001e-35
Identity = 82/145 (56.55%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  259 IRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLPPEIIGHLQQQCNT----PHQIPLMPSLHNLSQYNMGSI 681
            IRPGSMA+RARLA IP  E  LKCPRCDSTNTKFCYFNNYSL+QPRHFCKACRRYWTRGGALR+VPVGGGCRRN              ++       GNS S  S       H +   N     P     + SL  LS YN G I
Sbjct:   74 IRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTKNSSGGGGGSTSS-------GNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSL--LSSYNAGLI 209          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.694e-34
Identity = 80/145 (55.17%), Postives = 94/145 (64.83%), Query Frame = 1
Query:  268 GSMADRARLAKIPHT-EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTS---SLPPEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLN 690
            G  A+RARLAK     E  LKCPRCDS NTKFCYFNNY+L+QPRHFCKACRRYWTRGGALRNVPVGGGCRRN             + N++      N  STS   +  P    ++Q Q N+  Q P +P+L NL+Q  +G IGLN
Sbjct:   75 GQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRN---------KKGKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNS--QFPFLPTLQNLTQ--LGGIGLN 206          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 6.436e-34
Identity = 75/151 (49.67%), Postives = 90/151 (59.60%), Query Frame = 1
Query:  262 RPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLP-------PEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLNF 693
            R  SM +RAR+AK+P  E  L CPRCDSTNTKFCYFNNYSL+QPRHFCK CRRYWTRGG+LRNVPVGGG RRN              + +  +    N+ STSSL        P       Q       +P++P L +L  YN  + GL+F
Sbjct:   56 RVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRN--------KRSKSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHSYGQIPEFNSNLPILPPLQSLGDYNSSNTGLDF 198          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 3.531e-32
Identity = 67/105 (63.81%), Postives = 72/105 (68.57%), Query Frame = 1
Query:  259 IRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSS 573
            IR GSM DRAR A +   E  LKCPRC+STNTKFCYFNNYSL+QPRHFCK CRRYWTRGGALRNVPVGGGCRRN             +NN        N+ S SS
Sbjct:   68 IRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSN-------SNNNNNSTATSNNTSFSS 165          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.939e-26
Identity = 60/136 (44.12%), Postives = 78/136 (57.35%), Query Frame = 1
Query:  304 PHTEVP--LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLPPEIIGHLQQQCN----TPHQIPLMPSLHNLSQYNMGSIGLNF 693
            P  ++P  LKCPRCDS NTKFCY+NNYS+SQPR+FCKACRRYWT GG LRNVP+GGGCR+N             ++++     +  S + SS    I  H+    N    TP  + L P++        G  G +F
Sbjct:   52 PRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPTTMGLFPNVLPTLMPTGGGGGFDF 187          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.100e-25
Identity = 61/144 (42.36%), Postives = 79/144 (54.86%), Query Frame = 1
Query:  259 IRPGSMADRARLAKIPHTEVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLPPEIIGHLQQQCNTPHQIPLMPSLHNLSQYNMGSIGLN 690
            +   ++ D  R  + PH   P KCPRC+ST+TKFCY+NNYSLSQPR+FCK CRRYWT+GG LRN+PVGGGCR+N                 +K     +S+STSS      G       T +   LM   H+   Y    +G +
Sbjct:   53 VAAAALMDGGRRLRPPHDH-PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN-----------------KKPSSSNSSSSTSS------GKKPSNIVTANTSDLMALAHSHQNYQHSPLGFS 172          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF14_ARATH (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.451e-25
Identity = 61/135 (45.19%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  322 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNXXXXXXXXXXXXPANNTEKLQQMGNSNSTSSLPPEIIGHLQQQCNTP-------------HQIPLMPSLHNLSQYNMGSIGL 687
            LKCPRCDS+NTKFCY+NNYSLSQPRHFCKAC+RYWTRGG LRNVPVGG  R+N                T     +  +NS+S   P  I H     + P             + +P++PS  + S     S GL
Sbjct:   27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKN------KRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMNHHPLFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGL 155          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.181e-25
Identity = 45/56 (80.36%), Postives = 54/56 (96.43%), Query Frame = 1
Query:  313 EVPLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 480
            E+ L+CPRCDSTNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LRN+PVGGGCR+N
Sbjct:   52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKN 107          
BLAST of DY263085 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 9.315e-25
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 1
Query:  322 LKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 477
            LKCPRC+S NTKFCY+NNYSLSQPRHFCK+CRRYWTRGGALRNVP+GGGCR+
Sbjct:   41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRK 92          
The following BLAST results are available for this feature:
BLAST of DY263085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF11_ARATH2.137e-3748.30Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]
DOF51_ARATH2.001e-3556.55Dof zinc finger protein DOF5.1 OS=Arabidopsis thal... [more]
DOF22_ARATH1.694e-3455.17Dof zinc finger protein DOF2.2 OS=Arabidopsis thal... [more]
DOF36_ARATH6.436e-3449.67Dof zinc finger protein DOF3.6 OS=Arabidopsis thal... [more]
DOF24_ARATH3.531e-3263.81Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
PBF_MAIZE4.939e-2644.12Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=... [more]
DOF56_ARATH1.100e-2542.36Dof zinc finger protein DOF5.6 OS=Arabidopsis thal... [more]
DOF14_ARATH2.451e-2545.19Dof zinc finger protein DOF1.4 OS=Arabidopsis thal... [more]
DOF53_ARATH4.181e-2580.36Dof zinc finger protein DOF5.3 OS=Arabidopsis thal... [more]
DOF57_ARATH9.315e-2588.46Dof zinc finger protein DOF5.7 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DB03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263085 ID=DY263085; Name=DY263085; organism=Citrus clementina; type=EST; length=1340bp
TTTCTTTGAACCAACAAAAGCAGATTAAAGAAAAAAAAAAGATAAATATT
CCTATTCCTTTGTAATCTCTTCTTGAATATACCAAATATTTGTTTCTTTA
TAATTATACTTGTTTTTGATGTCTTTGGTTTATCTATTTTTCAGCAACCA
AATCATCAACAAGGTGCTGGCAGTGAAAATCCTCATCAGCTTCCACCTAT
TCCTTCAGCTCCTCATCATGTTGTTGGTGTTGGTGGTGCACCGGGCGGCG
CTGGCTCTATTAGGCCTGGTTCAATGGCTGATCGAGCCAGACTAGCCAAG
ATTCCACACACAGAGGTACCCCTGAAGTGCCCTAGATGTGATTCCACCAA
CACCAAGTTTTGCTACTTCAATAACTACAGCCTCTCTCAGCCACGCCACT
TCTGTAAGGCGTGCCGCCGCTACTGGACTAGAGGGGGCGCCCTAAGGAAT
GTACCCGTTGGTGGTGGATGCAGAAGAAACAAGAAAAGCAAAAGCAGCAG
CAGCTCCTCAAAATCCCCAGCCAATAACACTGAGAAGCTCCAGCAAATGG
GTAATTCAAATTCCACAAGCTCACTTCCCCCTGAGATTATTGGTCATTTG
CAACAACAGTGTAATACACCTCATCAAATACCGTTGATGCCTTCTTTACA
TAATCTCTCTCAGTACAATATGGGGAGTATTGGGTTAAATTTTGGAGGAA
TTGGAGCATCAAGTGGTGTTGGTAGTAGCCACAGTACTGATCATGTGGGG
TTCCAAATTGGAAGCAATTCAAGCATGAGTAGTAGTGCTATATTATCAGC
GGGAGGTGGTGTGCAGCAATTCACTTTCTTTGAGCCACCCATACAGGCTT
ATACTCTTTCCAAGCTGAAGGTATTGAAACTCCATCTTCTTTAGTCGTGG
CTTCAAACCCTAGGGTTTCTGAACAAGCTCCAGCGAAAATGGAAGATCAT
CACCAAGAGCTTAATTAATCTAAACCATTTTTTGGAATTTCCGAAAATAA
CCCAAATTGGAATGGGGAATAACTGGACGGAATCATTAGCACTTTAAAAA
TTCCCTTTCTACAATCATCTCTTAAAAAATTTTAAAGCTTTTTAAACTTG
AAACTGCTTTCACCGGATTCAAATCACTACAAAAAGCTTAACTTAAAAAA
AAAAAAAAATTAAAAAAAGGGGCAACGGTTCCCGGTGAAGCTTTCTTGGC
TTTTGCAAATTTCAAAAATTCTGAAAAAGGGAAAAAAAGGGAAAAAATTT
TTCTTTCTCTTCTATAAATTCCATGAAAGAAACCCCACAAACAAAACCAC
CAAAAAATATTTTTTAAAATAATTTTTTTTTTTTTGTTTT
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