DY263090

Overview
NameDY263090
Unique NameDY263090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1303
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263090 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.068e-21
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 2 
Query:   35 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDW 364
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDW 99
The following BLAST results are available for this feature:
BLAST of DY263090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.068e-2150.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10DB08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263090 ID=DY263090; Name=DY263090; organism=Citrus clementina; type=EST; length=1303bp
TTTAGAAACTAGCAGCTAAATTGTAAATTTAAAGATGCTAGAGAAGCTTT
GGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAGGCTG
AGGAAAATCACCACAACACCCTTAGCAGTCAAAGAGGGTGGTGAGGCGGA
GTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCCAG
GGGCACCGTCGACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTAAG
GACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAG
GGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCA
CTGTTTATGACTGGTAAGTACGTGCGTGTGTCCTCACTCACTCGCTCGCT
CGCTCACTCGCTCTTCACTAGCATAGATGCTGCATGCTTGTTCTAACTTA
TTATTCTTTCTTTAGACCCTTATCAGTTGAACGCAAAGGCAACTTGTACT
CTATCTATATATGTTTAATCATGTTCGGTTGCTGATAAATATATATATTT
ATTTATTAATTTGTTCTCTTTTTCTCCCCCCCCCCCCCCTTTTTTTAAAA
CTGAATTAATTCCCCGATCAGAAAAAAAACCGCAGCTTATTATATTCATG
TGTGCGTGTGTGTGTGTTTTAAAAAGAAAAATGATGAAACCAAATCGATG
GAGCATCAACTCAAACATCTCTGTTTTTGTTTTGTTTTTTTTGTCGTTCT
TACTGGCTTCTCTCAGCAACCAAATAAAGGCTAAGAGGAAGGAGGAAAAC
GTGGCACTCTGTCTCATGGGCGCGTTGAAATAGATCTTTGTCTTATTCAG
TAATGATCACTCAATTCACACTCTTTTGTGAATCCCTGCCCGTTCCTCCT
TAGTTAAAGCCAAATGATGTAATAAATAATATATTTTGTATTATGTAGTG
ATCATGGATAAAATAAAATCGACTTAAGCTAGGGCTGTTGGATCTGTTAA
TTTTGCGGGGGAAAAATAAAGTAAGTAATTAACTAATTTGATTAACCCTA
ATTATAATATAAATATAATAAAATAATAATAATAATATTAAATGGATCAG
ATCCGTGATCGGGGGGCCTCGGGTTTTTGTATCGGGAATTAATTTTTTCT
CTAAAATGGTTTTTTTTGATTTTTTCGGCTTTTTCAAGGGGGGAAAAACA
AAGACAAGCACCCCCCCCATCAGGGGGGAGAAAAAACCCCCCCCCCCCAA
AAATTAAAAGAAAAGGGGTGGGGGGGGGGCCCCCACCCACCCCCCCCCCA
GGA
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