DY263091
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.054e-84 Identity = 97/115 (84.35%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLEAT+ICIDNSEWMRNGDY+PSR QAQTEA NL+CGAKTQ NPENTVG++TMAGKGVRVL TPTSDLGKILACMHGL++GGE+NL A IQ+AQLALKHRQNK Q+QRIIVF G Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAG 115 HSP 2 Score: 124.405 bits (311), Expect = 2.054e-84 Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 3 Query: 495 SPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDD-EGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTGD 728 SPIK+EKK LE++G++LKKNSV+LDIVNFGEDD E +KLEALL AVNNND SH+VHVP G NALSDVLLSTP+FTGD Sbjct: 116 SPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFTGD 194 HSP 3 Score: 25.7942 bits (55), Expect = 2.054e-84 Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 794 YDFWVEPTLDPELAPA 841 +DF V+P +DPELA A Sbjct: 214 FDFGVDPNIDPELALA 229
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.145e-53 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 M LEAT++C+DNSEWMRNGD+ PSR +AQ +A NLIC +KTQ NPE+ V +M+MAGK VLVT T +L KIL+ L+I G+++ + +Q+AQLAL+HRQN Q RII FVG Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVG 115 HSP 2 Score: 88.9669 bits (219), Expect = 5.145e-53 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIF-TGDGE 734 V SP+K K+ L + ++LKKN VA+DI+NFGE E N++KLEA + VNNND SHL+ VPPGP+ LSD++L +PI +G G+ Sbjct: 114 VGSPLKETKEELIQLAKRLKKNGVAVDIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHILSDIILQSPIVESGSGQ 195
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.587e-46 Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVG Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVG 114 HSP 2 Score: 74.7146 bits (182), Expect = 6.587e-46 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDG 731 V SP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G Sbjct: 113 VGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG 193 HSP 3 Score: 23.483 bits (49), Expect = 6.587e-46 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 794 YDFWVEPTLDPELAPA 841 ++F V+P+ DPELA A Sbjct: 204 FEFGVDPSADPELALA 219
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.590e-46 Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVG Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVG 114 HSP 2 Score: 74.7146 bits (182), Expect = 6.590e-46 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDG 731 V SP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G Sbjct: 113 VGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG 193 HSP 3 Score: 23.483 bits (49), Expect = 6.590e-46 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 794 YDFWVEPTLDPELAPA 841 ++F V+P+ DPELA A Sbjct: 204 FEFGVDPSADPELALA 219
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 6.590e-46 Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLE+T++C+DNSE+MRNGD+ P+R QAQ +A N++C +KT+ NPEN VG++T+A VL T T D G+IL+ +H ++ G++ GI+VA LALKHRQ K + RII FVG Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVG 114 HSP 2 Score: 74.7146 bits (182), Expect = 6.590e-46 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDG 731 V SP++ +K L + ++LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S+PI G+G Sbjct: 113 VGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISSPILAGEG 193 HSP 3 Score: 23.483 bits (49), Expect = 6.590e-46 Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 794 YDFWVEPTLDPELAPA 841 ++F V+P+ DPELA A Sbjct: 204 FEFGVDPSADPELALA 219
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: RPN10_YEAST (26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae GN=RPN10 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 3.218e-45 Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFV 411 MVLEAT++ IDNSE+ RNGD+ +RF+AQ ++ I AK NPENTVG+++ AG RVL T T++ GKILA +H +I G+L++A +Q+AQL LKHRQNK Q QRI+ FV Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFV 114 HSP 2 Score: 73.559 bits (179), Expect = 3.218e-45 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNN--NDSSHLVHVPPGPNALSDVLLSTPIFTGDG 731 VCSPI + L + + LKKN+VA+DI+NFGE ++ NTE L+ +AAVNN ++SHL+ V PGP L + + S+PI +G Sbjct: 114 VCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQ-NTELLDEFIAAVNNPQEETSHLLTVTPGPRLLYENIASSPIILEEG 195 HSP 3 Score: 25.409 bits (54), Expect = 3.218e-45 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 797 DFWVEPTLDPELAPA 841 DF V+P++DPELA A Sbjct: 217 DFGVDPSMDPELAMA 231
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: RPN10_SCHPO (26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe GN=rpn10 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.378e-42 Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLEAT+I IDNSEWM NGDY P+RF+AQ + ++I K NPEN G+MT+ +VL T T D GK L+ MH L + G GIQ+AQLALKHR+NK Q+QRI+ FVG Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVG 115 HSP 2 Score: 64.6994 bits (156), Expect = 3.378e-42 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTG 725 V SPI ++K L + +++KKN+VA+DI++ GE N L+ + A N++DS HLV +PP P LSD++ +PI G Sbjct: 114 VGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ--NESALQHFIDAANSSDSCHLVSIPPSPQLLSDLVNQSPIGQG 190
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.514e-40 Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 MVLE+T+IC DNS++ RNGDY P+R Q + NL+C K + NPEN VG+MT++ V VL T TSD G+I + MH ++ GE+NL GI++A L LKHRQ K + RI+VFVG Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVG 114 HSP 2 Score: 62.7734 bits (151), Expect = 1.514e-40 Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTG-DGEG 737 V SPI HE+ L ++LKK V +DIV+FG D N E L A + A+N D SHLV VP G + LSD LLS+PI G DG G Sbjct: 113 VGSPINHEEGDLVKQAKRLKKEKVNVDIVSFG-DHGNNNEILTAFINALNGKDGTGSHLVSVPRG-SVLSDALLSSPIIQGEDGMG 196 HSP 3 Score: 22.3274 bits (46), Expect = 1.514e-40 Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 794 YDFWVEPTLDPELAPA 841 ++F V+P DPELA A Sbjct: 205 FEFGVDPNEDPELALA 220
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.771e-37 Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 76 LEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 L+ +DNSE+M NGD+ P+R QAQ +A N +C +KT+ NPEN VG++T+ VL T T D G+IL+ +H ++ G++ GI VA LALKHRQ + RII FVG Sbjct: 488 LQMLTTSVDNSEYMGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITL-DNDCEVLTTLTPDTGRILSKLHTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVG 599 HSP 2 Score: 70.4774 bits (171), Expect = 1.771e-37 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 3 Query: 489 VCSPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTGDG 731 V +P++ +K L + + LKK V +DI+NFGE +E NTEKL A + +N D SHLV VPPGP +L+D L+S PI G+G Sbjct: 598 VGNPVEDNEKNLVKLAKCLKKEKVNVDIINFGE-EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADALISFPILAGEG 678 HSP 3 Score: 23.0978 bits (48), Expect = 1.771e-37 Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 794 YDFWVEPTLDPELA 835 ++F V+P+ DPELA Sbjct: 689 FEFGVDPSADPELA 702
BLAST of DY263091 vs. ExPASy Swiss-Prot
Match: PSMD4_SCHMA (26S proteasome non-ATPase regulatory subunit 4 OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.544e-35 Identity = 54/115 (46.96%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 70 MVLEATLICIDNSEWMRNGDYAPSRFQAQTEAANLICGAKTQLNPENTVGVMTMAGKGVRVLVTPTSDLGKILACMHGLEIGGELNLAAGIQVAQLALKHRQNKKQQQRIIVFVG 414 M EAT+I +DNS++MRNGD+ P+R QAQ +A LIC +K Q NPENT+G++++A VL T T+D+ KI +H +E G + + I++A LAL+HRQ + Q+ RI+ F+G Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLA--NTEVLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIG 113 HSP 2 Score: 61.2326 bits (147), Expect = 1.544e-35 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 495 SPIKHEKKVLEMIGRKLKKNSVALDIVNFGEDDEGNTEKLEALLAAVNNND--SSHLVHVPPGPNALSDVLLSTPIFTG-DGEG 737 SPI ++K L + ++LKK V +DI+NFGE +E N +KL + +N D SHL+ V PG L D L+++P+ G DG G Sbjct: 114 SPILEDEKELTRLAKRLKKEKVNVDIINFGE-NETNEQKLSEFIDTLNGKDGTGSHLISVAPG-TVLHDTLMTSPVVAGEDGSG 195 The following BLAST results are available for this feature:
BLAST of DY263091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263091 ID=DY263091; Name=DY263091; organism=Citrus clementina; type=EST; length=1333bpback to top |