DY263099

Overview
NameDY263099
Unique NameDY263099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 5.059e-24
Identity = 80/243 (32.92%), Postives = 122/243 (50.21%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVL-GEMVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPPVSHPTLGQA-----------------------QASYGMPSNSSRRLDETMATEVETLS--FSSLDSMRDVMELLSDMLQAVNPSDREA 869
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H Q+  R+ + G +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R G++FP    DA +PI TP  S P +  A                          Y  P      +   ++   E +    S LD +R  ++++S+ML  + P    A
Sbjct:   17 IEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRKGIEFPMADLDALSPIHTPQRSVPEVDPATNMHTSQTQKRDSFSNLSNSKSTSTPYTAPGGPPPNVGGPISANSEQIGRLRSELDIVRGNVKVMSEMLTEMTPGQEGA 254          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.127e-23
Identity = 71/177 (40.11%), Postives = 104/177 (58.76%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGE-MVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPPVSHPTLGQAQASYGMPSNSSRR 746
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H  +A R+ +   +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R GV+FP    DA +PI TP  S P +  A     MP + S++
Sbjct:   17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAAT---MPRSQSQQ 185          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.511e-23
Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGE-MVKIV--KKKPDMQLRDKILVLLDSWQEAFGG----PGGKHPQYYWAYEDLRRYGVQFPKRSPDA-APIFTPPVSHPTLGQA 707
            ++KAT   L S DWT+N++ICD IN  +   KD ++A+KKRL  ++N +  +LALT+LET VKNCG   H  +A R+ +   +VKI+  K  P   ++DK+L L+ +W +AF       G  H      YE+L+R G++FP    DA +PI TP  S P +  A
Sbjct:   17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVH-----IYEELKRRGIEFPMADLDALSPIHTPQRSVPEMDPA 175          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.989e-20
Identity = 68/176 (38.64%), Postives = 94/176 (53.41%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQ-HKNSKVQLLALTLLETMVKNCGDFVHFQIAER----NVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTPPVSHPTLGQAQASYGMPSNSSRRLD 752
            ++KAT   L S DW +N++ICD IN  +   KD  +AVKKR+  +KN    +LALT+LET VKNCG   H  +A +    NVL   + + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP  +            + SN+S+R D
Sbjct:   17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTI-LPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSRQNSVSSNTSQRGD 190          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.989e-20
Identity = 73/242 (30.17%), Postives = 121/242 (50.00%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRL-QHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVK---IVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTPPVSHPTLGQAQASYGMPSNSSRRLDE-----TMATEVETLSFSSLDSMRDVMELLSDMLQAVNPSDREAVKMR*LLISSVGVGPSKKLMQML 938
            +++AT   L   DW++N++ICD IN  +   KD  +A+KKR+  +KN    +LALT+LET VKNCG   H  +A ++ +  ++    + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP  S  +            NS ++++      T+ +  +T S   +   ++ ++ L   L+ VN + +   +M   L+ S       +L+Q L
Sbjct:   17 IERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVHDKVLTLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPRRSVYSSNSQSGQNSPAVNSPQQMESILHPVTLPSGRDTSSNVPITPTQEQIKKLRSELEVVNGNVKVMSEMLTELVPSQAETSDLELLQEL 257          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 7.560e-20
Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRL-QHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVK---IVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPD-AAPIFTP 677
            ++KAT   L S DW +N++ICD IN  +   KD ++AVKKR+  +KN    +LALT+LET VKNCG   H  +A ++ +  ++    + K  P   + DK+L L+ SW +AF             YEDLRR G++FP    D  +PI TP
Sbjct:   17 IEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTP 165          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.874e-20
Identity = 49/134 (36.57%), Postives = 82/134 (61.19%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 644
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+ +++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 9.874e-20
Identity = 49/134 (36.57%), Postives = 82/134 (61.19%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 644
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+ +++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.684e-19
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 644
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+  ++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
BLAST of DY263099 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.684e-19
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  243 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPK 644
            +DKATS+LL+  DW   + ICD I     QAK  V ++KK++  KN  V L AL ++E++VKNCG  VH ++A +  + E+  ++K++ ++ +R+KIL L+ +W  AF     K+      Y+ ++  G  FP+
Sbjct:   12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNE-PKYKVVQDTYQIMKVEGHVFPE 144          
The following BLAST results are available for this feature:
BLAST of DY263099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
TM1L2_XENLA5.059e-2432.92TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE... [more]
TM1L2_HUMAN1.127e-2340.11TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1... [more]
TM1L2_MOUSE2.511e-2340.85TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1... [more]
TOM1_MOUSE1.989e-2038.64Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE... [more]
TOM1_CHICK1.989e-2030.17Target of Myb protein 1 OS=Gallus gallus GN=TOM1 P... [more]
TOM1_HUMAN7.560e-2040.00Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE... [more]
HGS_RAT9.874e-2036.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_MOUSE9.874e-2036.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_HUMAN1.684e-1936.57Hepatocyte growth factor-regulated tyrosine kinase... [more]
HGS_BOVIN1.684e-1936.57Hepatocyte growth factor-regulated tyrosine kinase... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DC05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263099 ID=DY263099; Name=DY263099; organism=Citrus clementina; type=EST; length=1175bp
ATAACGTNTGAAGGTAAAAAAAAAAAAAAGAATATATAAATTCTNTTGAG
CTTGAAAGCATTCATTGGGCGGTGTATTTTTCTTGGACCGAATTTTCTCG
TTAAACAAACAAACAAACAAACAAACAGGAAAAAGTTTTCATTTTCTTTT
TCTGTTATCTAATTTGGAGGGAGAGATAGAGAGTAAAGATGATGTCGTCA
TCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGACTGTGGCAGTTGACAA
GGCGACCAGCGAGCTTTTGATTAGTCCTGATTGGACTATGAACATCGATA
TCTGTGATTCCATCAATTCTCATCAGTGGCAGGCGAAAGATGTTGTGAAA
GCAGTGAAGAAAAGGTTACAGCACAAGAACTCAAAAGTGCAACTTCTTGC
GTTGACGCTTTTAGAGACGATGGTGAAGAATTGTGGTGATTTTGTTCATT
TTCAAATTGCTGAGAGGAATGTCTTGGGAGAGATGGTTAAAATTGTGAAG
AAGAAGCCAGATATGCAGCTGAGGGATAAAATCTTGGTTTTATTAGATTC
TTGGCAAGAGGCATTCGGTGGACCTGGGGGAAAACATCCTCAGTACTACT
GGGCTTATGAGGATTTAAGGCGTTATGGAGTACAATTTCCCAAGCGTTCA
CCAGATGCTGCTCCTATATTTACACCTCCTGTTTCCCACCCCACTCTAGG
ACAAGCTCAAGCTAGTTATGGAATGCCTAGCAATTCCTCAAGAAGGCTTG
ACGAAACAATGGCGACAGAGGTTGAAACTTTAAGTTTTTCAAGCTTGGAT
TCTATGCGAGATGTTATGGAGCTGTTAAGTGACATGCTGCAAGCTGTAAA
TCCTAGCGACCGTGAGGCAGTAAAGATGAGGTAATTGTTGATCTCGTCAG
TCGGTGTCGGTCCATCAAAAAAACTCATGCAGATGCTACTACACCCGGGG
ATGAGGAACTTTCTGCCGGGGTCTTGAATAAAGGACATTCTGGAAACTTT
GCTGCAAAAATGACGCTAAAACATCTGGTTTGCCATAACAACGGAATTAC
AAATTAATTCCAAACCAATGAAAAAATGCCCGCACCAACCCCAAAACAAC
GGAGCCTGGGAATCGAGCCCAAAACATAAGGGAACCCCCCCGCCCCGGTT
GTGTAGGTGGAAGAGGGCCCCATCT
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