DY263101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.043e-25 Identity = 67/237 (28.27%), Postives = 117/237 (49.37%), Query Frame = 1 Query: 337 FWLIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRI------------GENV----HRNFSKSRLAV-FLFDLAFIFPLPQVLVLLVYNRL-----MNVQQFFHVMNLF-IVQHLLKVKRLYALIKKRKNSYKHTKWARLTFNLF-YLHAANGFGALWYFFALQRKTECWRKAC-TGSTKCRLLPLHCD-NSLTNYTFSNDFCSTKTQNATIYDFG 969 F L + ++ DP+F Y+P+I+D KKC D + I V R+ D+ +++ + G V R +K L+ F+ D+ + PLPQ+++L++ + +N + + F + +++ LY + + T WA FNLF Y+ A++ FGA WY F+++R+T CW++AC + C L+CD + F N+ C +T N T++DFG Sbjct: 99 FVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFG 335 HSP 2 Score: 25.7942 bits (55), Expect = 4.043e-25 Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 968 GIYVDAINSGGMEQNS*SLKFLLWIRWTRQN 1060 GI++DA+ SG +E KF W QN Sbjct: 335 GIFLDALQSGVVESQDFPQKFFYCFWWGLQN 365
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.117e-21 Identity = 72/268 (26.87%), Postives = 119/268 (44.40%), Query Frame = 1 Query: 253 NGEKTSLRQIRNLPRRFLDATRRYPDANFWLIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRI--------------GE--NVHRNFSKSRL-AVFLFDLAFIFPLPQVLVLLVYNRLMNVQQFFHVMNL---FIVQHLLKVKRLYALIK---KRKNSYKHTKWARLTFNLF-YLHAANGFGALWYFFALQRKTECWRKACTGSTKCRLLPLHCD-NSLTNYTFSNDFC----STKTQNATIYDFG 969 N +K + ++ N +L + + F L+ V ++ FDP+F Y+P + + C D L + V RT D +++ + GE H++ + L + FL DL I P+PQV+VL + R+ L Q++ ++ R+Y L K + T WA NLF Y+ A++ FG+ WY +++RK CWR+AC C L+C N F N C + N+T+++FG Sbjct: 63 NNKKKKILRVMNPNDSYLQSWNKI----FLLLSVVALAFDPLFFYIPYVKPERFCLNLDKKLQTIACVFRTFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLSILPIPQVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNGSCPLIDPEEITNSTVFNFG 326 HSP 2 Score: 23.8682 bits (50), Expect = 3.117e-21 Identity = 11/31 (35.48%), Postives = 15/31 (48.39%), Query Frame = 2 Query: 968 GIYVDAINSGGMEQNS*SLKFLLWIRWTRQN 1060 GI+ DA+ SG +E KF W +N Sbjct: 326 GIFADALQSGVVESRDFPKKFFYCFWWGLRN 356
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.509e-20 Identity = 65/243 (26.75%), Postives = 116/243 (47.74%), Query Frame = 1 Query: 337 FWLIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIGENV----HRNFSKSRL-------------AVFLFDLAFIFPLPQVLVLLVY---NRLMNVQQFFHVMNLFIVQHLLKVKRLYAL---IKKRKNSYKHTKWARLTFNL-FYLHAANGFGALWYFFALQRKTECWRKACTGSTKCRLLPLHCDNSLTNYTFSNDFCSTK--------TQNATIYDFG 969 F V ++ DP+F Y+P+++ + C D L I + RT D +++ + R F + L + F+ DL I PLPQ++VL V N+ +++ ++ I Q++ ++ R+Y L + + T WA +NL Y+ A++ FGALWY +++R+ CW++AC + C + L+C+N + SN+F +T N+TI++FG Sbjct: 83 FLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCEN---DRNVSNNFLTTSCPFLDPGDITNSTIFNFG 322 HSP 2 Score: 23.483 bits (49), Expect = 1.509e-20 Identity = 11/31 (35.48%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 968 GIYVDAINSGGMEQNS*SLKFLLWIRWTRQN 1060 GI+ DA+ SG +E + KF W +N Sbjct: 322 GIFTDALKSGVVESHDFWKKFFYCFWWGLRN 352
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 3.431e-20 Identity = 66/205 (32.20%), Postives = 97/205 (47.32%), Query Frame = 1 Query: 352 VYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIGENV----HRNFSKSRLAV-------------FLFDLAFIFPLPQVLV--LLVYNRLMNVQQFFHVMN-LFIVQHLLKVKRLYAL---IKKRKNSYKHTKWARLTFNLF-YLHAANGFGALWYFFALQRKTECWRKACTGSTKCRLLPLHCDN 894 + ++ DP+FLYLP IND KC D L I+V RT D +L ALR R F + L + F+ DL + P+PQ++V L +R NV + + +VQ++ + R+Y L +K+ + T WA + L Y+ A++ GALWY AL+R +CW KAC + C L C N Sbjct: 123 ILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIIVWRFLYTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNNQNCTRNFLFCGN 327
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNG12_ARATH (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana GN=CNGC12 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 9.518e-20 Identity = 70/237 (29.54%), Postives = 120/237 (50.63%), Query Frame = 1 Query: 343 LIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLM---------------KKALRIGENVHRNFS-KSRLAV-FLFDLAFIFPLPQVLVLLVYNRLMNVQQFFHVMNLFIVQHLLKVKRLYALIKKRKNSY---KHTKWARLTFNLF-YLHAANGFGALWYFFALQRKTECWRKACTGSTKCRL--LPLHCDNS-LTNYTFSNDFC----STKTQNATIYDFG 969 L V ++ DP+FL++P+I+ + CF FD L+ +V V RT D +++ + +LR VH + K+RL F+ D+ + P+PQV+VL + ++ + + + Q++ ++ R+Y L K+ ++ +KWA NLF Y+ + FGA WY +++RK++CWR AC ++ C L L C + N F N C + N+T +DFG Sbjct: 46 LACVVALAIDPLFLFIPLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHSKATLKTRLLFHFIVDIISVLPIPQVVVLTLIPLSASLVSERILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYVFGAFWYLSSIERKSKCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFG 282 HSP 2 Score: 21.1718 bits (43), Expect = 9.518e-20 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 968 GIYVDAINSGGME 1006 G+Y+DA+ SG +E Sbjct: 282 GMYIDALKSGVLE 294
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 2.718e-19 Identity = 71/272 (26.10%), Postives = 123/272 (45.22%), Query Frame = 1 Query: 253 NGEKTSLRQIRNLPRRFLDATRRYPDANFWLIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIGENV----HRNFSKSRL-------------AVFLFDLAFIFPLPQVLVLLVY---NRLMNVQQFFHVMNLFIVQHLLKVKRLYAL---IKKRKNSYKHTKWARLTFNL-FYLHAANGFGALWYFFALQRKTECWRKACTGSTK-CRLLPLHCDNSLTNYTFSNDFCSTK--------TQNATIYDFG 969 N T+ + I N FL + F V ++ DP+F Y+P+++ + C L I V RT D +++ + R F + L + F+ DL I PLPQ++VL V N+ +++ +++ + Q++ ++ R+Y L + + T WA +NL Y+ A++ FGALWY +++R+ CWR+AC + C L+CD N + NDF +T N+T+++FG Sbjct: 59 NSSTTTQKNIINPQGSFLQNWNKI----FLFASVIALAIDPLFFYIPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDG---NSSVRNDFLTTSCPFINPDDITNSTVFNFG 323 HSP 2 Score: 23.0978 bits (48), Expect = 2.718e-19 Identity = 11/31 (35.48%), Postives = 16/31 (51.61%), Query Frame = 2 Query: 968 GIYVDAINSGGMEQNS*SLKFLLWIRWTRQN 1060 GI+ DA+ SG +E + KF W +N Sbjct: 323 GIFTDALKSGIVESDDFWKKFFYCFWWGLRN 353
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.719e-17 Identity = 67/240 (27.92%), Postives = 105/240 (43.75%), Query Frame = 1 Query: 352 VYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIGENV----HRNFSKSRLAV-------------FLFDLAFIFPLPQVLV---LLVYNRLMNVQQFFHVMNLFIVQHLLKVKRLYAL---IKKRKNSYKHTKWARLTFN-LFYLHAANGFGALWYFFALQRKTECWRKACTGST-KCRLLPLHCDNSLTN----YTFSNDF-----CSTKTQNATIYDFG 969 + ++ DP+FLYLP + D +KC D L I+ RT D +L ALR R F + L + F+ D + PLPQ++V L + + + ++ +VQ++ + RLY L +K+ + T WA + L Y+ A++ GA+WY AL+R CW K C+ S+ C L C N + +T D C T + +DFG Sbjct: 123 ILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVVWRFLYISKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCPVNTTDNPPFDFG 362
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 7.910e-17 Identity = 65/242 (26.86%), Postives = 101/242 (41.74%), Query Frame = 1 Query: 352 VYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIGENV----HRNFSKSRLAV-------------FLFDLAFIFPLPQVLVLLVYNR------LMNVQQFFHVMNLFIVQHLLKVKRLYALIKKRKNSYKHTKWARLTFNLF-YLHAANGFGALWYFFALQRKTECWRKACTGSTKCRLLPLHCDN-SLTNYTFSNDFCSTKTQNATIYDFGDIR*CY*FGWY 1002 + S+ DP F YLPVIN KC D L I RT D+ +L AL++ R F + L + F+ D + PLPQ++V L Q ++ + + L+V L + +K+ + T WA + L Y+ A++ GA WY AL+R CW++AC + C L+C N ++ Y N + ++ D D + FG Y Sbjct: 108 ILSVFVDPFFFYLPVINAESKCLGIDRKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAGNCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNNPPFDFGIY 349
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.140e-16 Identity = 68/238 (28.57%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 343 LIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLM---------------KKALRIGENVHRNFS-KSRLAV-FLFDLAFIFPLPQVLVLLVYNRLMNVQQFFHVMNLFIVQHLLKVKRLYALIKKRKNSY-----KHTKWARLTFNLFYLHAANGFGALWYFFALQRKTECWRKACTGSTKCRL--LPLHCDNS-LTNYTFSNDFC----STKTQNATIYDFG 969 L V ++ DP+FL++P+I+ + CF FD L+ +V V RT D +++ + +LR VH + K+RL F+ D+ + P+PQV+VL + ++ + + + Q++ ++ R+Y L K+ ++ A L F L+ LH + GA WY +++RK+ CWR AC ++ C L L C + N F N C + N+T +DFG Sbjct: 46 LACVVALAIDPLFLFIPLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHSKATLKTRLLFHFIVDIISVLPIPQVVVLTLIPLSASLVSERILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKRVGAALNFFLYMLH-SYVCGAFWYLSSIERKSTCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFG 282 HSP 2 Score: 21.1718 bits (43), Expect = 1.140e-16 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 968 GIYVDAINSGGME 1006 G+Y+DA+ SG +E Sbjct: 282 GMYIDALKSGVLE 294
BLAST of DY263101 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.263e-14 Identity = 60/218 (27.52%), Postives = 94/218 (43.12%), Query Frame = 1 Query: 337 FWLIYVYSIIFDPVFLYLPVINDGKKCFQFDIALMILVIVERTAYDILFLMKKALRIG----ENVHRNFSKSRLAV-------------FLFDLAFIFPLPQVLVLLVYNRLMNVQQF------FHVMNLFI----VQHLLKVKRLYALIKKRKNSYKHTKWARLTFNL-FYLHAANGFGALWYFFALQRKTECWRKAC------TGSTKCRLLPLHC 888 F + + ++ DP++ YLP++ G C D+ I V R D+ FL+ L+ R F + L + F+ DLA PLPQ+++ V + N +F H ++L + V L + L I K T W+ +NL YL ++ G++WY ++QR+ ECWR+ C T S C LL L C Sbjct: 59 FLITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFV---IPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDC 273 The following BLAST results are available for this feature:
BLAST of DY263101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263101 ID=DY263101; Name=DY263101; organism=Citrus clementina; type=EST; length=1184bpback to top |