DY263108

Overview
NameDY263108
Unique NameDY263108
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 6.190e-21
Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 1
Query:  700 YKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVNFKLVRV 912
            Y+GVR RPWG++AAEI DPK NGARVWLGTY+TPE AA+ YDRAA+++  S+AK +FPHL+    ++ VR+
Sbjct:   92 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRI 162          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.686e-18
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  688 KVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            K  HY+GVR RPWG++AAEI DP  NGARVWLGTY+T E AAL YD+AAY M  S+A  +FPH
Sbjct:   95 KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPH 157          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.686e-18
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1
Query:  688 KVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            K  HY+GVR RPWG++AAEI DP  NGARVWLGTY+T E AAL YD+AAY M  S+A  +FPH
Sbjct:   99 KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPH 161          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.876e-18
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  664 AARDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            AA   +  +  HY+GVR RPWG++AAEI DP  NGARVWLGTY+T E AA+ YD+AAY M  S+A  +FPH
Sbjct:   93 AAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPH 163          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.876e-18
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  685 AKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVN 894
            AK +HY+GVR RPWG++AAEI DP  NGARVWLGT++T E AAL YDRAA+ M  SRA  +FP   +RVN
Sbjct:  143 AKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP---LRVN 209          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.179e-17
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  688 KVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVN 894
            K +HY+GVR RPWG++AAEI DP  NGARVWLGT++T E AAL YD AA+ M  SRA  +FP   +RVN
Sbjct:  113 KAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFP---LRVN 178          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 7.083e-17
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1
Query:  682 QAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPH 876
            Q K  HY+GVR RPWG++AAEI DP  NGARVWLGTY++ E AAL Y +AA+ M  ++A  +FPH
Sbjct:  101 QPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPH 165          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.831e-16
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  673 DRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFP 873
            D+DQ +  HY+GVR RPWG++AAEI DPK   ARVWLGT++T E AAL YDRAA +   ++AK +FP
Sbjct:   30 DQDQPRRRHYRGVRQRPWGKWAAEIRDPK-KAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.831e-16
Identity = 41/81 (50.62%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  652 TAGLAARDRDQAKVEHYKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVN 894
            ++ L  +++  ++  +Y+GVR RPWG++AAEI DP N  ARVWLGT+DT E AAL YD+AA+E    +AK +FP   +RVN
Sbjct:   54 SSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDP-NKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPE-HIRVN 132          
BLAST of DY263108 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.886e-15
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  700 YKGVRTRPWGRYAAEIIDPKNNGARVWLGTYDTPEGAALCYDRAAYEMHDSRAKHDFPHLLVRVNF---KLVRVNTTHTT 930
            Y+GVR RPWG+YAAEI D   +GARVWLGT++T E AAL YDRAA+ M  ++A  +FP  +V  +    KL   + ++TT
Sbjct:   59 YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASVSVDKLSLCSNSYTT 138          
The following BLAST results are available for this feature:
BLAST of DY263108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ERF99_ARATH6.190e-2161.97Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF2_TOBAC1.686e-1866.67Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY1.686e-1866.67Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_TOBAC2.876e-1859.15Ethylene-responsive transcription factor 1 OS=Nico... [more]
EF100_ARATH2.876e-1864.29Ethylene-responsive transcription factor 1A OS=Ara... [more]
EF101_ARATH3.179e-1762.32Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF1_SOLLC7.083e-1760.00Ethylene-responsive transcription factor 1 OS=Sola... [more]
EF113_ARATH7.831e-1659.70Ethylene-responsive transcription factor ERF113 OS... [more]
EF112_ARATH7.831e-1650.62Ethylene-responsive transcription factor ERF112 OS... [more]
PTI5_SOLLC3.886e-1551.25Pathogenesis-related genes transcriptional activat... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263108 ID=DY263108; Name=DY263108; organism=Citrus clementina; type=EST; length=1331bp
ATCGGTTTGAAATTAAACTGAAATCGATATATTCTCACTTCTCACACGTG
GGCTGTCTCACGTCCACTTGCGAAAAAATAAATTTTCACTTGTAATTTTT
CAGAAATGTATTCGGAAAGTATTTCTCAAACGGATATGGCTCTCTTGGAG
TCAATCCGGCATCATCTTCTAGATGATGACTTCGAAGACATAAATTCAAT
GATGCAACCACTACAAGTAGAAAACGTTAATTCATCAATATTGCAACAGC
ACCAGCACCGGCAGCAACATCAGCAGCAGCAAATGCCTCTAGAAAATTTT
TCATAATCAGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAACAC
AACCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGTACT
CACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAAGTA
ACACGTAAGGTTGTTATTAACAATAACAACAACTACCCAATCCCTTCCTA
TGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCGTGG
GTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCAATA
AGCGAAACCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCACCA
TACGGCGGGGTTGGCAGCACGTGATCGTGATCAAGCGAAGGTGGAGCATT
ACAAGGGGGTGAGGACGAGGCCATGGGGGAGATATGCGGCTGAGATTATA
GACCCTAAGAATAACGGGGCACGTGTTTGGCTTGGCACTTATGATACCCC
TGAGGGCGCAGCCTTGTGCTATGATAGAGCCGCGTACGAGATGCATGACT
CTAGAGCTAAGCATGATTTTCCTCACTTACTTGTCAGGGTTAATTTTAAG
CTCGTTCGTGTCAACACGACCCACACCACTAAGCGTGTCTCACCAGAGTC
CGAGGCTGAACTTTCTTCTAACTCTTCATCATCATCCCCTTCTTCGACTA
CTTCTTCACCGTCATCTTTTGTTAATGGTGGCCGGAAGATTCCCCAAACC
CTAACCGAAAAAAGAACAAGGGGACAAACCGCGGTGGCTTGATCCTAAAA
CCTGAACCTGGAACCCGGTCCTCTCCAATAAAAAAAAAAAGGGAAACGAG
CAAAAAGGGGGGAAACCCCCTCCCGGGCAACCTAAACCGAAACCTTTTCC
CAAAAATTTATTCTTTAAAAAATTTAATTTTGGTGCCCGCCTTTTTCTTC
ATCTTTAAAAAAAAGAAAGCGAGACCCCCCGTGGGGGTTGTTGAGGTAAA
ACCCCTTTTTTTTTGTTTTATAATTTTATTA
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