DY263134

Overview
NameDY263134
Unique NameDY263134
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1342
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_CYAPA (Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 3.543e-64
Identity = 115/214 (53.74%), Postives = 153/214 (71.50%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP--IKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFVALRNEKLMDGLSPFLGLGHGHTRGYN 999
            SILV+GATGTLGRQIVR ALDEGY VRCLVR     A FL++WGA ++  DLS+PE++   L G+  +ID +T RP +P  + +VD +GK ALI  AKAM I+K++F+SI N +K+ +VPLM IK  TE+ L++SGL + I +LCGF QGLIGQYAVPIL++++VW T   T IAYMDT DIAR T  +L  ++  + + P +G     TR +N
Sbjct:    2 SILVIGATGTLGRQIVRSALDEGYQVRCLVR-NLRKAAFLKEWGAKLIWGDLSQPESLLPALTGIRVIIDTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKIEKFIFFSILNSEKYSQVPLMRIKTVTEELLKESGLNYTIFKLCGFFQGLIGQYAVPILDQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPLVG-----TRSWN 209          

HSP 2 Score: 51.2174 bits (121), Expect = 3.543e-64
Identity = 21/51 (41.18%), Postives = 34/51 (66.67%), Query Frame = 2
Query:  980 DTQEVITLCEKLAGSDANVTRAPVAVLKFTRQLNGFFEWKMKVAEEWHFSE 1132
            ++ ++I LCE+L+G +A VTR P+A L+  R  + FFEW   +A+   F+E
Sbjct:  209 NSADIIQLCERLSGQNAKVTRVPIAFLELARNTSCFFEWGWNIADRLAFTE 259          
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_GUITH (Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.452e-59
Identity = 99/205 (48.29%), Postives = 139/205 (67.80%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFVALRNEKLMDGLSPFLGL 972
            S+LV+GATGTLGRQIVRRALDEGY+V CLVR     A FL++WGA ++  DLS PET+P  L  +  +ID +T RP +P K  K+D EGK+AL++ AK  GI+++VF+S+ N   +  +PL+ +K   E++LQ S L +   +L GF QGLI QYA+PILE++++W T   T+I Y+DT DIA+    +L     +    P +GL
Sbjct:    2 SLLVIGATGTLGRQIVRRALDEGYEVSCLVR-NLRKAYFLKEWGAELLYGDLSLPETLPTNLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLNAQNYRHLPLVNLKCRMEEYLQTSELEYTTFQLSGFFQGLISQYAIPILEKQTIWITGEYTKINYIDTNDIAKFAVRSLSLNGTIKRTIPLVGL 205          

HSP 2 Score: 55.8398 bits (133), Expect = 2.452e-59
Identity = 23/58 (39.66%), Postives = 38/58 (65.52%), Query Frame = 2
Query:  959 LFWVSGMDTQEVITLCEKLAGSDANVTRAPVAVLKFTRQLNGFFEWKMKVAEEWHFSE 1132
            L  +   +++E+I LCE+L+G  AN+T+ P+ +L F + L GFFEW   ++E   F+E
Sbjct:  202 LVGLKSWNSEEIIQLCERLSGQKANITKIPLQLLVFFKYLTGFFEWTTNISERLAFAE 259          
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_PORPU (Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.424e-56
Identity = 101/204 (49.51%), Postives = 142/204 (69.61%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFVALRNEKLMDGLSPFLG 969
            ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA +V  DL  PE+I  +  GV  VID +T RP +P   +++D +GK+ALI+ AKA  +Q+++F+SI N D++P+VPLM +K     +LQ S + + +  L GF QGLI QYA+PIL++KSVW T   T IAY+DTQD A+L   +L      + + P +G
Sbjct:    2 TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELVYGDLKLPESILQSFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFSILNADQYPKVPLMNLKSQVVNYLQKSSISYTVFSLGGFFQGLISQYAIPILDKKSVWVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRILPLVG 204          

HSP 2 Score: 42.743 bits (99), Expect = 2.424e-56
Identity = 16/48 (33.33%), Postives = 31/48 (64.58%), Query Frame = 2
Query:  989 EVITLCEKLAGSDANVTRAPVAVLKFTRQLNGFFEWKMKVAEEWHFSE 1132
            E+ITLCEKL+G    +++ P+++LK  R++    +W   +++   F+E
Sbjct:  212 EIITLCEKLSGQKTQISQIPLSLLKALRKITKTLQWTWNISDRLAFAE 259          
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_ODOSI (Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.552e-55
Identity = 93/191 (48.69%), Postives = 133/191 (69.63%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE--PIKKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFVALR 930
            S+L++G TGTLGRQ+V +AL +GY VRCLVR     A+FL++WGA ++  DLS+PETIP  L G+  VID +T RP +   +K+VDW+GK ALI+ A+A  ++ +VF S  N ++   +PLME+K+  E  LQ S +P+ + RL GF QGLI QYA+P+LE   +  T+  T ++YMDTQDIA+    +L+
Sbjct:    2 SLLIIGGTGTLGRQVVLQALTKGYQVRCLVR-NFRKANFLKEWGAELIYGDLSRPETIPPCLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNIPLMEMKFGIETKLQQSNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTNENTCVSYMDTQDIAKFCLRSLQ 191          

HSP 2 Score: 51.9878 bits (123), Expect = 1.552e-55
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 2
Query:  965 WVSGMDTQEVITLCEKLAGSDANVTRAPVAVLKFTRQLNGFFEWKMKVAEEWHFSE 1132
            WVS     E+I LCE+LAG  A V + P+ +LK   Q+ GFFEW   +++   F+E
Sbjct:  208 WVSS----EIINLCEQLAGQSAKVNKIPLFLLKLVSQIFGFFEWGQNISDRLAFAE 259          
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_PORYE (Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.295e-54
Identity = 99/204 (48.53%), Postives = 141/204 (69.12%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI--KKVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFVALRNEKLMDGLSPFLG 969
            ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA ++  DL  PE+I  +  GV  +ID +T R  +P   +K+D +GK+ALI+ AKA  +++++F+SI N +K+P+VPLM +K     FLQ S + +++  L GF QGLI QYA+PIL++KSVW T   T IAY+DTQD A+L   +L      +   P +G
Sbjct:    2 TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELIYGDLKLPESILQSFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFSILNSEKYPDVPLMNLKSQVVDFLQKSNVKYIVFSLGGFFQGLINQYAIPILDKKSVWVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRTLPLVG 204          

HSP 2 Score: 40.817 bits (94), Expect = 1.295e-54
Identity = 15/48 (31.25%), Postives = 29/48 (60.42%), Query Frame = 2
Query:  989 EVITLCEKLAGSDANVTRAPVAVLKFTRQLNGFFEWKMKVAEEWHFSE 1132
            E+I LCEKL+G    +++ P+ +LK  R++    +W   +++   F+E
Sbjct:  212 EIIKLCEKLSGQKTQISQIPIGLLKALRRITKTLQWTWNISDRLAFAE 259          
BLAST of DY263134 vs. ExPASy Swiss-Prot
Match: YCF39_CYACA (Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.023e-30
Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 1
Query:  364 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK--KVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEQFLQDSGLPHVIIRLCGFMQGLIGQYAVPILEEKSVW--GTDAPTRIAYMDTQDIARLTFVA 924
            S+LV+GAT TLGRQIV++AL +GY+V+CLVR     A FL+ WGA +V  DL  PET+P   VG   +ID +T + ++      VD   K A+++ A    ++K+V +S+ N  ++ +VP  +IK   ++ L  SG+ ++I    GF Q L  QYA PIL  + V+        +I+Y+D +D A +   A
Sbjct:    2 SLLVIGATSTLGRQIVKKALIQGYEVKCLVR-NSKKAAFLKAWGAILVYGDLMVPETLPQCFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVPSTKIKSDFDRALIKSGINYLIFTPLGFFQDLTSQYAAPILSSQPVFILEQSESVQISYIDARDAANIVLAA 191          

HSP 2 Score: 29.6462 bits (65), Expect = 3.023e-30
Identity = 12/33 (36.36%), Postives = 21/33 (63.64%), Query Frame = 2
Query:  992 VITLCEKLAGSDANVTRAPVAVLKFTRQLNGFF 1090
            +I+LC+  AG  + V   P+ ++ F R++ GFF
Sbjct:  215 IISLCQLYAGQASPVVTVPLLLVYFIRRILGFF 247          
The following BLAST results are available for this feature:
BLAST of DY263134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
YCF39_CYAPA3.543e-6453.74Uncharacterized protein ycf39 OS=Cyanophora parado... [more]
YCF39_GUITH2.452e-5948.29Uncharacterized protein ycf39 OS=Guillardia theta ... [more]
YCF39_PORPU2.424e-5649.51Uncharacterized protein ycf39 OS=Porphyra purpurea... [more]
YCF39_ODOSI1.552e-5548.69Uncharacterized protein ycf39 OS=Odontella sinensi... [more]
YCF39_PORYE1.295e-5448.53Uncharacterized protein ycf39 OS=Porphyra yezoensi... [more]
YCF39_CYACA3.023e-3038.74Uncharacterized protein ycf39 OS=Cyanidium caldari... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10DF04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263134 ID=DY263134; Name=DY263134; organism=Citrus clementina; type=EST; length=1342bp
ACGTGGCAAGACTGCCACCCACAGTCTTCTTCTCTGTCTTCTCATTTCTC
CCTCCTTCTTCTCCTCCTCTCCTCCCACACAGACACATCGAGAGAGGAAA
AGGCAAAGCAAATGGCCTTGAGATCGCTGCCGACTCAGCTACCGACACGT
GGCAACCTCCATCAGCCCCATCCCCATCACCACATGAAAGGCTCACTCTC
ATGGTGCCACACTTTAACTCCTCTGCCCCTCCTCTCCCCCTCCGCCAACT
CCTTAGGGAAAGTTTGTACACAACAAATGGTGGTGAAATGTAGTGCCGGT
GGTGGTACTAGTGGTACTGTGCAGGCGGTGAATATGAGTCCAGGGACACC
GGTGAGACCCACGAGTATACTAGTTGTTGGTGCAACGGGGACACTTGGCA
GGCAGATAGTCAGGCGTGCACTGGATGAAGGTTACGACGTTAGGTGCCTT
GTGAGGCCCAGACCCGCCCCTGCTGATTTTCTCCGCGATTGGGGTGCCAC
CGTTGTCAATGCAGACTTGAGCAAACCAGAGACCATACCTGCAACATTGG
TTGGTGTTCATACAGTCATTGACTGTGCCACAGGCCGTCCAGAAGAGCCT
ATCAAAAAAGTAGACTGGGAAGGAAAAGTCGCTCTTATACAATGCGCCAA
AGCAATGGGAATCCAGAAGTATGTATTTTATTCAATTCACAACTGTGACA
AGCATCCTGAAGTCCCACTAATGGAGATCAAGTATTGCACAGAGCAGTTT
CTGCAGGACTCCGGCCTACCTCACGTTATTATTCGGTTATGTGGGTTCAT
GCAAGGCCTTATTGGGCAATATGCAGTACCTATACTAGAAGAGAAGTCTG
TCTGGGGAACGGATGCACCAACTCGAATTGCATACATGGACACTCAGGAT
ATAGCGCGACTGACATTCGTAGCTTTACGCAATGAGAAATTAATGGACGG
ACTCTCACCTTTTCTGGGTCTCGGGCATGGACACACAAGAGGTTATAACA
TTGTGTGAAAAGCTCGCAGGTTCAGATGCAAATGTTACCAGGGCCCCGGT
GGCTGTCCTGAAATTTACTAGGCAGCTTAACGGGTTTTTTGAGTGGAAAA
TGAAGGTGGCTGAAGAATGGCATTTTTCCGAGGGTTCTTTAAAATGAACT
GGTATTCCTGGTTCCCATGGTCGGAAAAATTTCAATCTTTTCGGGGGGGG
GAACCCAAAGGGAAAATTTTTACCCCGGGGAAAAAAATTTTTGGGGGGAA
ATCCTTTTTCCTAACAATTTTTTAAAAAAAAATTTAGGGGAGGCCCTTCA
AGACCACAATCCTCCTTTACCGGCCCGCGGCTTCTATTTTTT
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