DY263135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263135 vs. ExPASy Swiss-Prot
Match: ERCC8_MOUSE (DNA excision repair protein ERCC-8 OS=Mus musculus GN=Ercc8 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.297e-14 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 589 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHXSVFVG*QQHEHGHKYAISSAIWYPVDTGLFVTGLYDHYVKVWDTIAL 984 + R++G P + R+ L+L+ +++ H +N+L ++ E RY+LSG SD V +YD++ A+ H VG + H HKY++ + WYP DTG+F + +D +KVWDT L Sbjct: 5 LSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENASRQP---HYTCKAVCSVG-RSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL 132
BLAST of DY263135 vs. ExPASy Swiss-Prot
Match: ERCC8_HUMAN (DNA excision repair protein ERCC-8 OS=Homo sapiens GN=ERCC8 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.785e-13 Identity = 39/132 (29.55%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 589 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHXSVFVG*QQHEHGHKYAISSAIWYPVDTGLFVTGLYDHYVKVWDTIAL 984 + R+ G P + R+ L+L+ +++ H G IN+L ++ E RY+LSG SD + +YD++ ++ + +G + H H+Y++ + WYP DTG+F + +D +KVWDT L Sbjct: 5 LSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQ---SYYTCKAVCSIG-RDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL 132
BLAST of DY263135 vs. ExPASy Swiss-Prot
Match: ERCC8_BOVIN (DNA excision repair protein ERCC-8 OS=Bos taurus GN=ERCC8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.638e-13 Identity = 40/132 (30.30%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 589 IGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHXSVFVG*QQHEHGHKYAISSAIWYPVDTGLFVTGLYDHYVKVWDTIAL 984 + R+AG P + R+ L+L+ +++ H +N+L ++ E RY+LSG SD + +YD++ ++ + VG + H HKY++ + WYP DTG+F + +D +KVWDT L Sbjct: 5 LSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQP---YYTCKAVCSVG-RSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL 132
BLAST of DY263135 vs. ExPASy Swiss-Prot
Match: YN19_SCHPO (Uncharacterized WD repeat-containing protein C577.09 OS=Schizosaccharomyces pombe GN=SPBC577.09 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.253e-12 Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 598 REAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHK----GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHXSVFVG*QQHEHGHKYAISSAIWYPVDTGLFVTGLYDHYVKVWDTIAL 984 RE GQ +SF ++ HRL L L+ +I H GS+N+L +D T + ++SG ++SS+ V+D+Q E I + HK+ I+ W+P D G+F + +DH +KVWD L Sbjct: 8 REWGQEPNSSFRRQLLQHRLQRLALNPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPA----RTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTL 136 The following BLAST results are available for this feature:
BLAST of DY263135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263135 ID=DY263135; Name=DY263135; organism=Citrus clementina; type=EST; length=1331bpback to top |