DY263165

Overview
NameDY263165
Unique NameDY263165
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1146
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 4.673e-67
Identity = 132/252 (52.38%), Postives = 165/252 (65.48%), Query Frame = 1
Query:   46 ESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEFGA 801
            ES +WT+LP ++TS IL ++GAI++L +AQ+VC SW R+C DP+MWR IDMHNLGDL DMD++LE MCRHAVDRS G L+ I I YFGT +LL YIA           + C  I+D GF EA+   P              E+L  VG  C  +++ KLN      P+ E DDDA AIAE M  LRHLQL GN L++ GL AILD C +LE LDLR+CFNVNLVG L K C E ++ +RH NDS HD + G+
Sbjct:   15 ESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELELSYCSFSV-ESLRVVGQCCLNMKTLKLNKH----PQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRHPNDSIHDIDIGS 261          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 7.460e-65
Identity = 128/255 (50.20%), Postives = 165/255 (64.71%), Query Frame = 1
Query:   55 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKI-----ECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEFGAD 804
            +W +LP+ +TS+IL ++GAI++L +AQ+VC  W R+C DP+MWR ID+ N  D     +DLE MCRHAVDRS+G L+ I I Y+GT++L+ YIA           V C+ I+D+G  +A+   P              E+L  +G  CP L++ KLN    R P+I       DD+AKAIAE+M  LRHLQL GN LTN GL AILDGCPHLE LDLRQCFN+NLVG L K C ERI+DLR  NDS  D + G+D
Sbjct:  180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLN----RAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPNDSDDDSDDGSD 430          

HSP 2 Score: 103.219 bits (256), Expect = 2.968e-21
Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 1
Query:  559 DDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEFGA 801
            DD+  AIAE M  LRHL+LFGN LTN+ L+AILD C HL  LDLR+CFN+NL+G L K C+ERIRDLR  +DST D  F A
Sbjct:   19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRDLRRPDDSTADSPFDA 99          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: FB221_ARATH (Putative F-box protein At4g05480 OS=Arabidopsis thaliana GN=At4g05480 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 9.766e-57
Identity = 121/278 (43.53%), Postives = 162/278 (58.27%), Query Frame = 1
Query:   40 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRC----------PKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLES-LDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEFGADFQDFCWASVEKL 840
            ++E  +W  LP ++T++IL ++   D+L +A+++C +W RIC DP+MWR I   NL D    + D E MCRH VD S G LL INIE+F +D LL YI                 ++++G    I+  P              + L+A+G  CP L++ KLN+ G             P +ECDDDA AIAE+M  LRHLQL GN LTN GL AILDGCPHLE  LD+R+CFN+NLVG L K C +RI++LR  +DST DY FG    DF     +K+
Sbjct:   34 DEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKI---NLRDCLMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTADYPFGQASPDFAMNLEDKV 307          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana GN=FBL21 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.972e-49
Identity = 113/267 (42.32%), Postives = 147/267 (55.06%), Query Frame = 1
Query:   43 QESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINI-EYFGTDELLQYIAXXXXXXXXXXXVSCY-NISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPK--------------IECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEF 795
            +E  +W  LP ++T++IL ++   D+L +AQ+VC  W RIC DP+MWR I   N  D    + D   MCRH VD S G LL IN+ E+F +D LL YI              C+  ++  G   AI   P              + L+A+G  CP L++ KLN+ G   P               +ECDDDA AIAE+M  L HLQL  N LTN GL AILDGCPHLE LD+R+CF ++LVG L K C E I++LR   DST DY +
Sbjct:   41 KERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKI---NTRDCLMYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGM--CFPRVTKLGVVNAIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEKRCLEMIKELRRPGDSTADYPY 301          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana GN=FBL22 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.394e-49
Identity = 111/262 (42.37%), Postives = 148/262 (56.49%), Query Frame = 1
Query:   16 SRMSTGTAEQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEY--FGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLNNRGHRCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGKICAERIRDLRHLNDSTHDYEF 795
            S++     E++  +W +LP D+ S+IL ++  +++L +A++VC SW R+  DP +WR IDM NL  L+ + + +E  CRH VD S G LL  NI+   F T  LL Y+A           V    I+  G  EAI   P             +E  + +G  CP L++ KL   G      E D+DA AIA+ M GL HLQL  N LTN+GL AILDGCPHLE LDLRQCFN+NL G L + C ERI+D R  ND   DY +
Sbjct:   13 SQLPVMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLV--GFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDVLDDYNY 270          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.013e-45
Identity = 102/231 (44.16%), Postives = 135/231 (58.44%), Query Frame = 1
Query:   55 DWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMH---NLGDLWDMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCEAIKGFPXXXXXXXXXXXXXQEA-LEAVGSLCPLLRSFKLNNRGH-RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVNLVGKLGK 732
            +W +LP ++TS+IL ++GAI++L +AQRVC SW R+C DP+MWR ID+    NL +  ++ + +E +C  AVD S G LL INI+Y      L YIA           V C  +  +G  EA    P             +E  L+ VG  CP LR+ KLN  G  +C    CD  A AIAE M GLRHLQLF N L+  GL AIL+GCPHL++L L QC N+N+VG + K
Sbjct:   20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC----CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246          
BLAST of DY263165 vs. ExPASy Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.427e-15
Identity = 67/248 (27.02%), Postives = 107/248 (43.15%), Query Frame = 1
Query:   40 EQESCDWTQLPADVTSTILSKIGAIDVLTSAQRVCSSWLRICHDPAMWRNIDMHNLGD-------LW--DMDHDLEKMCRHAVDRSNGQLLSINIEYFGTDELLQYIAXXXXXXXXXXXVSCYNISDQGFCE-AIKGFPXXXXXXXXXXXXXQEALEAVGSLCPLLRSFKLN----NRGH----------RCPKIECDDDAKAIAENMHGLRHLQLFGNELTNVGLQAILDGCPHLESLDLRQCFNVN 711
            E++  DW  L  ++   I+S++   ++ T    V  SWL +C DP +W   D+    D       LW  + +  ++ M R  VD S G L  I + +  +D  L Y A            S  N++D    + A +                 + L  +G  CP LR  K N    +  H           CP+ + D +A AI ++M  L HL++  + L+  GL +I +GCP LE LDL  C +++
Sbjct:    2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQ-DGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCVHLS 247          
The following BLAST results are available for this feature:
BLAST of DY263165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SKI19_ARATH4.673e-6752.38F-box protein SKIP19 OS=Arabidopsis thaliana GN=SK... [more]
FBL23_ARATH7.460e-6550.20Putative F-box/LRR-repeat protein 23 OS=Arabidopsi... [more]
FB221_ARATH9.766e-5743.53Putative F-box protein At4g05480 OS=Arabidopsis th... [more]
FBL21_ARATH1.972e-4942.32Putative F-box/LRR-repeat protein 21 OS=Arabidopsi... [more]
FBL22_ARATH4.394e-4942.37Putative F-box/LRR-repeat protein 22 OS=Arabidopsi... [more]
FBL9_ARATH1.013e-4544.16Putative F-box/LRR-repeat protein 9 OS=Arabidopsis... [more]
SKIP1_ARATH1.427e-1527.02F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKI... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10DH12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263165 ID=DY263165; Name=DY263165; organism=Citrus clementina; type=EST; length=1146bp
ATTGGATGCAACATTAGCAGAATGAGCACAGGCACGGCGGAGCAAGAATC
ATGCGACTGGACGCAGTTGCCGGCGGACGTGACGTCAACGATTCTATCAA
AAATCGGCGCCATCGATGTGCTGACGAGCGCGCAACGTGTGTGCTCTTCT
TGGCTGAGGATCTGCCACGATCCCGCCATGTGGCGGAACATTGACATGCA
CAACTTAGGAGATTTGTGGGACATGGACCATGACTTGGAGAAGATGTGCC
GCCACGCTGTTGACCGTAGCAACGGCCAATTGCTTTCCATCAATATCGAG
TACTTCGGTACCGATGAGCTTCTCCAATACATCGCTAATAGGTCAAGGAA
TCTCAGGAATCTCAGACTTGTGTCATGTTATAACATTTCAGACCAAGGAT
TTTGTGAAGCTATTAAAGGGTTTCCACTGCTCGAGGAGCTTGAACTTTCA
TACTGCTCATTATCACAAGAAGCATTGGAAGCTGTTGGGAGCCTTTGCCC
ACTTCTGAGATCATTTAAATTGAACAACCGGGGTCACAGGTGCCCAAAAA
TAGAGTGTGATGATGATGCGAAAGCTATAGCAGAAAACATGCATGGATTG
CGCCATCTCCAGTTATTTGGAAACGAGCTGACAAATGTGGGGTTGCAGGC
TATTCTTGATGGCTGTCCTCACCTTGAATCACTTGACCTGCGCCAGTGTT
TCAATGTCAATCTGGTTGGGAAATTGGGGAAGATATGTGCTGAGAGAATC
AGAGATTTACGACATCTCAATGACTCTACCCATGACTATGAATTCGGTGC
AGATTTTCAAGATTTTTGTTGGGCATCTGTAGAAAAATTACCCATCTGGG
ATTTTCCGATATGGAGCTTGTGTCTGAAGAAGATGAATACAATGAGTTCT
CTGATTAATGACTTTGGCTATGACTTTGACAATGAACATTTGGTTAAGGA
TTAAGGGTCAAGGTTTGGTAAAAAAAGAGAAAGTTGAAAGGTTAGAACTT
AGGGCCTCCCCCCTGGTTTGGCAAGGGCCCATTCCCTGAAATTTCCTTGG
GTTGGGGGTAAGAACTTTATTAAACCTTTCTACCTTGGGGGGTCAAAAAA
GAAAAAAGGAAAAAAACCTTGGTTTTTTTTTCTAGGCCTTTCCCCC
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