DY263190

Overview
NameDY263190
Unique NameDY263190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1272
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NBP35_YARLI (Cytosolic Fe-S cluster assembly factor NBP35 OS=Yarrowia lipolytica GN=NBP35 PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 7.001e-67
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 3
Query:  480 EHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAA-MDFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGI 1121
            EHCPG +SE AGK+D CQGCPNQ+ CA+APKGPDPDL  I +RM  VKHKILVLSGKGGVGKSTFS+ L +  A+ +D +VGL+DIDICGPS+PKM+G EG+ IH S  GWSP+YV  NLG+MS+GFMLPN D+A+IW+G  +    ++F K    GN+D+LV D PPGTSDEH+ +  +L+ + + G               RK+  F RK GI
Sbjct:   27 EHCPGTESEEAGKADACQGCPNQDICASAPKGPDPDLPLIKDRMKGVKHKILVLSGKGGVGKSTFSSLLGWGFASDLDREVGLMDIDICGPSLPKMMGSEGEQIHTSLSGWSPIYVSDNLGMMSVGFMLPNQDDAIIWRGAKKNGLIKQFLKDVDWGNLDYLVVDTPPGTSDEHLSVTQYLKESGVDGAVVITTPQEVALLDVRKELDFCRKSGI 241          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NUBP1_DICDI (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Dictyostelium discoideum GN=nubp1 PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.011e-65
Identity = 122/216 (56.48%), Postives = 157/216 (72.69%), Query Frame = 3
Query:  480 EHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAMD-FQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            E+CPG QSE +GKS  C GCPNQ+ CATAPKGPDPD++ I ERM TVK+KILVLSGKGGVGKSTFS+QLS+AL+  +  +VGLLDIDICGPSIPK++GLEG++IH S  GW PVYV+ NL VMS+GF+L   ++AVIW+G  +    ++F K     ++D+LV D PPGTSDEH+ IV +L+ + + G               RK+  F +KVG+P
Sbjct:   11 ENCPGTQSEMSGKSAACAGCPNQQICATAPKGPDPDIIEIEERMKTVKNKILVLSGKGGVGKSTFSSQLSFALSMDEKVEVGLLDIDICGPSIPKIMGLEGENIHISGQGWDPVYVQDNLAVMSVGFLLEKEEDAVIWRGPKKNGIIKQFLKDVYWNDLDYLVIDTPPGTSDEHLSIVQYLKTSNLSGAVIVTSPQDVALIDVRKEINFCKKVGVP 226          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NUP1A_XENLA (Cytosolic Fe-S cluster assembly factor nubp1-A OS=Xenopus laevis GN=nubp1-A PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 8.558e-65
Identity = 123/224 (54.91%), Postives = 156/224 (69.64%), Query Frame = 3
Query:  459 EIPENANEHCPGPQSESAGKSDDCQGCPNQEACAT-APKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAMDF-QVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            +IP+NA +HCPG  S  AGKS  CQGCPNQ  CA+ A  GPDP +  I E+M+ VKHKILVLSGKGGVGKSTFSA L++ LA  +  +V LLD+DICGPSIPKM+GLEG+ +HQS  GWSPVYVE NL VMS+GF+L +PD+AVIW+G  +    ++F +    G++D+L+ D PPGTSDEH+ +V +L A  I G               RK+  F RKV +P
Sbjct:    3 DIPDNAPQHCPGTDSTEAGKSSACQGCPNQSICASGAAAGPDPAIEEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHLSVVQYLSAAGIDGAVIITTPQEVSLQDVRKEINFCRKVKLP 226          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NBP35_CRYNE (Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus neoformans GN=NBP35 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 8.558e-65
Identity = 123/222 (55.41%), Postives = 153/222 (68.92%), Query Frame = 3
Query:  462 IPENANEHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAA-MDFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            +PENA EHCPG +S  AGK+D C+GCPNQ  CA  PKGPDPDL  I ERM++V+ KILVLSGKGGVGKSTF+A LS+ALAA  + Q G++DIDICGPSIP ++GLE   IH S  GWSP Y   NL VMSIGF+LP+  +AVIW+G  +    ++F K    G++D++V D PPGTSDEH+ IV +L+   I G               RK+  F +KVGIP
Sbjct:   27 VPENAPEHCPGVESSQAGKADACEGCPNQSVCAEGPKGPDPDLPLIRERMSSVRRKILVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESSTIHTSASGWSPAYALDNLAVMSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGDLDYMVVDTPPGTSDEHLSIVQYLKEAGIDGAVLVTTPQEVALQDVRKEIDFCKKVGIP 248          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NUBP1_NEMVE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Nematostella vectensis GN=v1g236650 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.460e-64
Identity = 122/227 (53.74%), Postives = 159/227 (70.04%), Query Frame = 3
Query:  459 EIPENANEHCPGPQSESAGKSDDCQGCPNQEACATA-PKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAA-MDFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIPGSG 1133
            ++P++A EHCPG +S+ +GK   CQGCPNQ+ CA++ P  PDPDL  I ER+++VKHKILVLSGKGGVGKSTF+A L++ LAA  D QV +LDIDICGPSIP + GL+G+ +HQS  GWSPVYVE NLGVMS+GF+L  P +AVIW+G  +    ++F +    G+ DFLV D PPGTSDEH+ I+ +L  TE+ G               RK+  F +KV +P  G
Sbjct:    3 DVPKDAPEHCPGTESDKSGKVSACQGCPNQQICASSKPAPPDPDLGKIKERLSSVKHKILVLSGKGGVGKSTFTAHLAHGLAADEDRQVAVLDIDICGPSIPTVFGLQGEQVHQSGSGWSPVYVEDNLGVMSVGFLLAKPTDAVIWRGPKKNGLIKQFLRDVDWGDADFLVVDTPPGTSDEHLSIIQYLNQTEVDGAVVVTTPQEVSLLDVRKEISFCKKVRLPVIG 229          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NUBP1_DANRE (Cytosolic Fe-S cluster assembly factor nubp1 OS=Danio rerio GN=nubp1 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.906e-64
Identity = 122/224 (54.46%), Postives = 155/224 (69.20%), Query Frame = 3
Query:  459 EIPENANEHCPGPQSESAGKSDDCQGCPNQEACAT-APKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAA-MDFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            ++P +A EHCPG  S+ AGKS  CQGCPNQ  CA+ A K PDP +  I ++M +VKHKILVLSGKGGVGKSTFSA LS+ALA+    +V LLD+DICGPSIPK++GLEG+ +HQS  GWSPVYVE NL VMSIGF+L +PD+AVIW+G  +    ++F +    G +D+L+ D PPGTSDEH+ IV +L    I G               RK+  F +KV +P
Sbjct:    3 DVPNDAPEHCPGTSSDQAGKSSACQGCPNQSICASGATKAPDPAIEEIKQKMTSVKHKILVLSGKGGVGKSTFSAHLSHALASDSSKEVALLDVDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLAVMSIGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSIVQYLSGAGIDGAVIITTPQEVSLQDVRKEIRFCKKVNLP 226          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NUP1B_XENLA (Cytosolic Fe-S cluster assembly factor nubp1-B OS=Xenopus laevis GN=nubp1-B PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 7.245e-64
Identity = 122/224 (54.46%), Postives = 154/224 (68.75%), Query Frame = 3
Query:  459 EIPENANEHCPGPQSESAGKSDDCQGCPNQEACATAP-KGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAMDF-QVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            +IPENA +HCPG  S  AGKS  CQGCPNQ  CA+A    PDP +  I E+M+ VKHKILVLSGKGGVGKSTFSA L++ LA  +  +V LLD+DICGPSIP+M+GLEG+ +HQS  GWSPVYVE NL VMS+GF+L +PD+AVIW+G  +    ++F +    G +D+L+ D PPGTSDEH+ +V +L A  I G               RK+  F RKV +P
Sbjct:    3 DIPENAPQHCPGTGSTEAGKSSACQGCPNQSICASAATSAPDPAIEEIKEKMSLVKHKILVLSGKGGVGKSTFSAHLAHGLAQDEGKEVALLDVDICGPSIPRMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVQYLSAAGIDGAVIVTTPQEVSLQDVRKEINFCRKVKLP 226          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NBP35_CHAGB (Cytosolic Fe-S cluster assembly factor NBP35 OS=Chaetomium globosum GN=NBP35 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.108e-63
Identity = 122/215 (56.74%), Postives = 149/215 (69.30%), Query Frame = 3
Query:  480 EHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAM-DFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGI 1121
            EHCPGP+SE AG +D C GCPNQ  CA+APKGPDPDL AI  R+A VKHKILVLSGKGGVGKST +AQL+ ALA   +  VG++D DICGPSIPKMLG+E + IH S  GWSPV+   NL VMSI FMLPN D+A+IW+G  +    ++F K    G++DFL+ D PPGTSDEH+ +  FL+ + I+G               RK+  F RK GI
Sbjct:   31 EHCPGPESEQAGTADSCAGCPNQAICASAPKGPDPDLPAITARLAGVKHKILVLSGKGGVGKSTLTAQLAQALATNPEATVGVMDTDICGPSIPKMLGVEAETIHVSGSGWSPVWAADNLAVMSIQFMLPNRDDAIIWRGPKKNGLIKQFLKDVEWGDLDFLLVDTPPGTSDEHLSVNTFLKESRIEGAVVVTTPQEVSLLDVRKEIDFCRKAGI 245          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NBP35_SCHPO (Cytosolic Fe-S cluster assembly factor nbp35 OS=Schizosaccharomyces pombe GN=nbp35 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.753e-63
Identity = 115/222 (51.80%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  462 IPENANEHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAM-DFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGIP 1124
            +P +A EHCPGP SE+AG +  C+GCPNQ+ CA+AP+G DPDL  + ER+  +KHKILVLSGKGGVGKSTFS+QL++ L+   D Q+GL+D+DICGPSIP+++G+E ++ HQS+ GWSP+YV  NL VMSIGF+LP+ D +VIW+G  +    ++F K     N+D+L+ D PPGTSDEH+ +V F + + I G               RK+  F RK  IP
Sbjct:    7 VPLDAPEHCPGPSSENAGTASACEGCPNQQICASAPRGEDPDLPLVVERLKEIKHKILVLSGKGGVGKSTFSSQLAWGLSLEEDKQIGLMDVDICGPSIPRIMGVEKEEAHQSSKGWSPIYVCPNLAVMSIGFLLPSEDSSVIWRGPKKNGLIKQFIKDVNWENLDYLIVDTPPGTSDEHLSLVQFFKNSGIDGAVVVTTPQEVALQDVRKEIDFCRKASIP 228          
BLAST of DY263190 vs. ExPASy Swiss-Prot
Match: NBP35_ASPTN (Cytosolic Fe-S cluster assembly factor nbp35 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=nbp35 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 3.595e-63
Identity = 117/215 (54.42%), Postives = 148/215 (68.84%), Query Frame = 3
Query:  480 EHCPGPQSESAGKSDDCQGCPNQEACATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLSYALAAM-DFQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWKGTSQERANQKFPKGCLLGNIDFLVGDAPPGTSDEHILIVHFLQATEIKGXXXXXXXXXXXXXXXRKK*IFGRKVGI 1121
            EHCPGP+SE AGK D C GCPNQ  CATAPKGPDPD+  I ER++ ++HKILVLSGKGGVGKSTFS+ L++A AA  D  VG++D D+CGPSI KM+G+E + IH SN GWSPV+V  NLG MSI FMLPN D+A+IW+G  +    ++F K    G +D+L+ D PPGTSDEH+ +   L+ + + G               RK+  F RK GI
Sbjct:   29 EHCPGPESEQAGKGDACAGCPNQNICATAPKGPDPDVAIITERLSQIRHKILVLSGKGGVGKSTFSSLLAHAFAANPDSDVGIMDTDLCGPSIAKMMGVEAETIHVSNAGWSPVWVTDNLGAMSIQFMLPNRDDAIIWRGPKKNGLIKQFLKDVDWGELDYLIVDTPPGTSDEHLSVNSLLKESGVDGAVIVTTPQEVSLQDVRKEIDFCRKAGI 243          
The following BLAST results are available for this feature:
BLAST of DY263190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
NBP35_YARLI7.001e-6756.74Cytosolic Fe-S cluster assembly factor NBP35 OS=Ya... [more]
NUBP1_DICDI1.011e-6556.48Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
NUP1A_XENLA8.558e-6554.91Cytosolic Fe-S cluster assembly factor nubp1-A OS=... [more]
NBP35_CRYNE8.558e-6555.41Cytosolic Fe-S cluster assembly factor NBP35 OS=Cr... [more]
NUBP1_NEMVE1.460e-6453.74Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
NUBP1_DANRE1.906e-6454.46Cytosolic Fe-S cluster assembly factor nubp1 OS=Da... [more]
NUP1B_XENLA7.245e-6454.46Cytosolic Fe-S cluster assembly factor nubp1-B OS=... [more]
NBP35_CHAGB2.108e-6356.74Cytosolic Fe-S cluster assembly factor NBP35 OS=Ch... [more]
NBP35_SCHPO2.753e-6351.80Cytosolic Fe-S cluster assembly factor nbp35 OS=Sc... [more]
NBP35_ASPTN3.595e-6354.42Cytosolic Fe-S cluster assembly factor nbp35 OS=As... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11AC06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263190 ID=DY263190; Name=DY263190; organism=Citrus clementina; type=EST; length=1272bp
CAAATTCCCAAAACCTAAAAATCCCTAAATTTATCTCCGCTTCCCCAGCT
GCTCCATCAGCTTCTCACTTCACTCTCCTCCGGCAGCCAACAGCCGACGT
TTATTGCCCCACCCTAACACCGAATTAAGGAGCCACCACCTTCAGCAGCG
ATCCACCGTTCACGCGCGACGCAGCAGAGCCAGCAACCCAGCAGTAGTGC
AGCACCAAACGGGCGACGCAACAGTGACCCACACCCACCAGCACCACCGT
GCGACGTAGCTGCAGCCAATCGAACACGCGCGACGCAGCAGCAGCTATCT
CAGCTCCAACGCGACCTGAACCCAGCAGCACCAGCAGCGCACGCGAACCA
ACAGCAAACCATCACCAACTCCATCCCAACTCTCCTCCTTTGCTTTCATT
CACATACTAAGAAGCAGAAGAACTACTATTATAAGAGAAGCCACCAATGG
AGAATGGAGAAATTCCAGAAAATGCTAATGAACATTGCCCTGGTCCTCAA
TCAGAGTCTGCAGGAAAATCTGATGATTGCCAAGGATGCCCTAATCAAGA
AGCTTGTGCTACCGCCCCAAAAGGCCCTGACCCTGACTTGGTTGCTATTG
CTGAACGAATGGCTACTGTTAAGCATAAGATACTGGTTTTATCGGGTAAG
GGTGGAGTTGGAAAAAGCACATTCTCTGCCCAGCTCTCATATGCACTAGC
GGCTATGGATTTCCAAGTAGGTCTCCTGGACATTGACATTTGTGGCCCCA
GCATCCCAAAGATGCTTGGGCTAGAGGGTCAAGACATTCACCAAAGCAAC
CTTGGGTGGTCTCCTGTCTATGTTGAATCCAACCTTGGGGTAATGTCCAT
TGGCTTCATGCTCCCCAACCCAGATGAAGCTGTCATATGGAAGGGGACCT
CGCAAGAACGGGCTAATCAAAAATTTCCTAAAGGATGTTTATTGGGGAAT
ATCGATTTTCTGGTGGGTGATGCACCACCAGGGACTTCAGATGAACACAT
CCTCATTGTCCATTTCCTCCAGGCTACGGAAATAAAGGGGCCATAATTGG
TACTACTCCCGCAACAGTTTCCCTGAATGATGTTAAGAAAAAAATAAATT
TTTGGCAGAAAAGTGGGAATCCCGGGTTCTGGGGGTCGTTTAAAAAAAGA
AATGGGTTGGGGTTCCTTCTTTTAGTGGGATTTTTAAAATCTTTAGGGGG
AAAATGGGGAAGGGGGTGGAAGAAAATTGAAGGTTCCCCCAAAAAAAAAG
CTTTTAAAAAAAGAGGCGTGGG
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