DY263218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_ARATH (Diaminopimelate epimerase, chloroplastic OS=Arabidopsis thaliana GN=DAPF PE=1 SV=1) HSP 1 Score: 442.195 bits (1136), Expect = 3.276e-123 Identity = 222/345 (64.35%), Postives = 249/345 (72.17%), Query Frame = 2 Query: 38 MAITTTRSLSVTPVTRRSATPINXXXXXXXXXXXXXXXXXNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEWEGRKN 1072 M I ++SV P +RR + + K PS RVSA++ E S SFLD++E+G LHFVKYHGLGNDFILVDNR+S+EP+IT EQA KLCDRNFG+GADGVIFAMPGVNGTDY MRIFNSDGSEPEMCGNGVRCFARFIAELENL GK SFT+HTGAGLIVPEIQDDG+VKVDMG PILKA DVPT LS NK ++VV++EL VDGV WNVTCVSMGNPHC+TFG K G NLKVD LNL EIGPKFEHH +FPARTNTEFVE++ S LKMRVWER EG A++KC V LPG P EIEW+ N Sbjct: 1 MEIAAVSTVSVAPQSRRVSNAFSRNLGSVSSLSFGFFEK-EYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDN 344
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSJ (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPF PE=3 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 3.180e-110 Identity = 195/300 (65.00%), Postives = 228/300 (76.00%), Query Frame = 2 Query: 176 PSFRVSASSMSSIHAPESASRTSFLDRRESG-FLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEWEGRKN 1072 P+ R ++M+ + P SA+ +FL+RRES LHFVKY GLGNDFI+VDNR+S P++TPE+A KLCDRNFG+GADGVIF MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENL G SF +HTGAGLI+PEIQ+DGKVKVDMG+PIL D+PT L + K+++VV+++L VDG W VTCVSMGNPHCVTFGTKE + L VD L L++IGPKFEHH +FPARTNTEFVE++ S LKMRVWER EG AE+KC V LPG P EIEW N Sbjct: 38 PTARRCVAAMA-VSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDN 336
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_ORYSI (Putative diaminopimelate epimerase, chloroplastic OS=Oryza sativa subsp. indica GN=DAPF PE=3 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 7.084e-110 Identity = 194/300 (64.67%), Postives = 228/300 (76.00%), Query Frame = 2 Query: 176 PSFRVSASSMSSIHAPESASRTSFLDRRESG-FLHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEWEGRKN 1072 P+ R ++M+ + P SA+ +FL+RRES LHFVKY GLGNDFI++DNR+S P++TPE+A KLCDRNFG+GADGVIF MPGVNG DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENL G SF +HTGAGLI+PEIQ+DGKVKVDMG+PIL D+PT L + K+++VV+++L VDG W VTCVSMGNPHCVTFGTKE + L VD L L++IGPKFEHH +FPARTNTEFVE++ S LKMRVWER EG AE+KC V LPG P EIEW N Sbjct: 41 PTARRCVAAMA-VSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMMDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDN 339
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_TRIEI (Diaminopimelate epimerase OS=Trichodesmium erythraeum (strain IMS101) GN=dapF PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 1.259e-82 Identity = 155/260 (59.62%), Postives = 184/260 (70.77%), Query Frame = 2 Query: 278 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEW 1057 F KYHGLGNDFIL+DNR+ +P +TPEQA +LCDRNFGIGADGVIFA+PGV TDYTMRIFNSDGSEPEMCGNG+RC A+FIAELEN N K + +HTGAG+IVPE+Q DG+V VDMG+P L AS++PT+L AN D VV L+V G W VTCVSMGNPHC+TF V ++LA+IGPKFEH+ VFP RTNTEF+++I +KMRVWER + E+ V LPG EIEW Sbjct: 5 FTKYHGLGNDFILIDNRHQLQPILTPEQAIELCDRNFGIGADGVIFALPGVKQTDYTMRIFNSDGSEPEMCGNGIRCLAKFIAELEN-NNKTKYNIHTGAGIIVPELQGDGQVTVDMGQPRLLASEIPTTL-ANADDKVVDQLLEVGGKSWFVTCVSMGNPHCITFVE------DVTAIDLAKIGPKFEHNPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLTQNNERLVTVELPGGCLEIEW 256
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_SYNY3 (Diaminopimelate epimerase OS=Synechocystis sp. (strain PCC 6803) GN=dapF PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 9.024e-81 Identity = 153/267 (57.30%), Postives = 184/267 (68.91%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEWEGRKN 1072 L F KYHGLGNDFILVDNR STEP +TP+QA++LCDR+FGIGADGVIFA+PG GTDYTMRIFNSDGSEPEMCGNG+RC A+F+A+LE + K ++ +HT AG+I P++ DG+VKVDMGEP L A +PT+L A + VV L V G W VTCVSMGNPHC+TF VD LNL EIGP FEHH F RTNTEF++++ S +LKMRVWER G +++C V LPG EIEW + N Sbjct: 3 LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQLCDRHFGIGADGVIFALPGQGGTDYTMRIFNSDGSEPEMCGNGIRCLAKFLADLEGVEEK-TYRIHTLAGVITPQLLADGQVKVDMGEPQLLAELIPTTL-APAGEKVVDLPLAVAGQTWAVTCVSMGNPHCLTFVD------DVDSLNLTEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVVAAVLTGRGDRRCTVELPGGNLEIEWSAQDN 261
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF2_ANASP (Diaminopimelate epimerase 2 OS=Anabaena sp. (strain PCC 7120) GN=dapF2 PE=3 SV=2) HSP 1 Score: 295.434 bits (755), Expect = 4.952e-79 Identity = 145/263 (55.13%), Postives = 179/263 (68.06%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLN-GKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEW 1057 + F KYHGLGNDFIL+DNR S P ITPE+A ++CDR+FGIGADGVIFA+PG NGTDYTMRIFNSDGSEPEMCGNG+RC A F+A+LE L+ K ++ +HT AG+I P++ DG++KVDMG P L A ++PT+L A D V+ L+V+G W VTCVSMGNPHC+TF V + L IGPKFEHH FP RTNTEF++++ LKMRVWER G +++ V LPG P EIEW Sbjct: 3 IEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQLTPDGQIKVDMGLPRLLAGEIPTTLGA-ADGKVINQPLEVEGQTWEVTCVSMGNPHCITFVE------DVAAIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACASLVAAVLTGRSDRLATVELPGGPLEIEW 258
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP6 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapF PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 6.692e-76 Identity = 146/263 (55.51%), Postives = 179/263 (68.06%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQS-FTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEW 1057 L F KYHGLGNDFILVDNR S EPR+TPEQA ++CDRNFG+GADGVIFA+PG +DY MRIFNSDGSEPEMCGNG+RC A+F++EL+ G QS + + TGAGLIVP + + G V VDMG LK ++PT+L+ D+ VV+++L+V W VT VSMGNPHC+TF V + LAEIGP FEHH VFP RTNTEFVE++ LKMRVWER G ++++ V LPG P +IEW Sbjct: 3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELD--GGAQSRYRIATGAGLIVPTLTETGLVTVDMGPAYLKPVEIPTTLTGTGDR-VVEADLEVGDRPWKVTTVSMGNPHCITFVE------DVAAVPLAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSDRQATVELPGGPLQIEW 256
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_SYNE7 (Diaminopimelate epimerase OS=Synechococcus elongatus (strain PCC 7942) GN=dapF PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 6.692e-76 Identity = 146/263 (55.51%), Postives = 179/263 (68.06%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQS-FTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEW 1057 L F KYHGLGNDFILVDNR S EPR+TPEQA ++CDRNFG+GADGVIFA+PG +DY MRIFNSDGSEPEMCGNG+RC A+F++EL+ G QS + + TGAGLIVP + + G V VDMG LK ++PT+L+ D+ VV+++L+V W VT VSMGNPHC+TF V + LAEIGP FEHH VFP RTNTEFVE++ LKMRVWER G ++++ V LPG P +IEW Sbjct: 3 LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPGSGDSDYVMRIFNSDGSEPEMCGNGIRCLAKFLSELD--GGAQSRYRIATGAGLIVPTLTETGLVTVDMGPAYLKPVEIPTTLTGTGDR-VVEADLEVGDRPWKVTTVSMGNPHCITFVE------DVAAVPLAEIGPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSDRQATVELPGGPLQIEW 256
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_NOSP7 (Diaminopimelate epimerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapF PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 6.692e-76 Identity = 141/263 (53.61%), Postives = 176/263 (66.92%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLN-GKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEW 1057 + F KYHGLGNDFIL+DNR+S+ P +TPEQA +LCDR+FGIGADGVIFA+PG NGTDYTMRIFNSDGSEPEMCGNG+RC A F+A+LE + K S+ +HT G++ P++ DG VKVDMG P L A ++PT+L A ++ V+ L+V G W VTCV+MGNPHC+TF V + L IGPKFEHH FP R NTEF++++ LKMRVWER G ++ V LPG P +IEW Sbjct: 3 IEFTKYHGLGNDFILIDNRSSSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGNGIRCLAGFLADLEGQSRNKDSYRIHTLGGVMTPQLLSDGLVKVDMGLPRLLAGEIPTTL-APVEEKVISVPLEVAGKTWEVTCVNMGNPHCITFVE------DVAAIELESIGPKFEHHPAFPQRINTEFIQVVRRDYLKMRVWERGAGITLACGTGACASLVAGVLTGKCDRTATVELPGGPLQIEW 258
BLAST of DY263218 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP2 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapF PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 5.666e-75 Identity = 143/268 (53.36%), Postives = 173/268 (64.55%), Query Frame = 2 Query: 272 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGK-QSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQSVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPARTNTEFVEIIFSSQLKMRVWERXXXXXXXXXXXXXXXXXXXXPEGHAEKKCPVGLPGRPWEIEWEGRKN 1072 L F KY GLGNDFIL+DNR T P +TPEQA +LCDR+FGIGADGVIFA+PG G DYTMRIFNSDGSEPEMCGNG+RC ARFI LE N +++++HT AG+I P ++ D V+VDMGEPIL A+D+PT+L + Q+ V L+V G W VTCVSMGNPHC+TF V + L IG FEHH FP R NTEF+E++ +KMRVWER GH ++ C V LPG +IEW N Sbjct: 3 LEFTKYQGLGNDFILLDNRQQTTPLVTPEQAIQLCDRHFGIGADGVIFALPGQAGADYTMRIFNSDGSEPEMCGNGIRCLARFIDHLEGGNAPGKTYSIHTLAGMIRPRLETDALVRVDMGEPILTATDIPTTLKDSNGQA-VNQPLEVAGKTWMVTCVSMGNPHCITFVE------DVAAIALEVIGKDFEHHPAFPQRINTEFIEVVRPDYIKMRVWERGAGITLACGTGACASVVAGVLTGHCDRLCTVELPGGCLQIEWSAADN 263 The following BLAST results are available for this feature:
BLAST of DY263218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263218 ID=DY263218; Name=DY263218; organism=Citrus clementina; type=EST; length=1326bpback to top |