DY263219

Overview
NameDY263219
Unique NameDY263219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1298
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.141e-22
Identity = 71/255 (27.84%), Postives = 118/255 (46.27%), Query Frame = -3
Query:   79 IYSVSEIRSATNNFLXXXXXXXXXXSCWRCVLRGRDVIIFQRRFRRNLQTQDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPFKY 843
            I+S  EI+SAT NF                +  G+ V +  R  R  L        + ++ +  H +++   G         LVY+Y++G +L+D L   R+   ++  +W+SR+++A D A GLDY+HN  G    ++H  +KSS+I++ +   NAK+  FG ++   + D  +    +K                                 G   Y+ PE+ +T   T+KSDVY+ GVV+LEL+CG EP  +
Sbjct:  595 IFSHKEIKSATRNFKEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSL--NWVSRLKVAVDAAKGLDYLHN--GSEPRIIHRDVKSSNILL-DKDMNAKVSDFGLSKQFTKADASHITTVVK---------------------------------GTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSH 811          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.188e-18
Identity = 71/261 (27.20%), Postives = 118/261 (45.21%), Query Frame = -3
Query:   79 HIYSVSEIRSATNNFLXXXXXXXXXXSCWRCVLRGRDVI---IFQRRFRRNLQTQDIRERLSVICRSH--HNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPFKY 846
            H +++ ++  ATN F             +  V RG+ V    +  ++   NL   +   R+ V    H  H ++++LLG  I      LVY+Y+N  NL   L  +      +  +W +RM+I T  A  L Y+H    +   +VH  IK+S+I++ +  FNAK+  FG A+L                 GES I+  ++                    G   Y++PE+  TG+  +KSD+Y+ GV++LE + G +P  Y
Sbjct:  169 HWFTLRDLELATNRFAPVNVLGEGG---YGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNL--TWEARMKIITGTAQALAYLHE--AIEPKVVHRDIKASNILIDD-EFNAKLSDFGLAKLLDS--------------GESHITTRVM--------------------GTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDY 387          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 8.082e-18
Identity = 72/256 (28.12%), Postives = 112/256 (43.75%), Query Frame = -3
Query:   91 YSVSEIRSATNNFLXXXXXXXXXXS-CWRCVLRGRDVIIFQRRFRRNLQTQ-DIRERLSVICRSHHNSIIKLLGASISDDSI----YLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEE 840
            + + E+  ATNNF              ++ VL    VI  ++      Q   + R  + +I    H +++ L G S+ DD      YLVYDY++  NL D L   R     +  SW  R  I  D+A GL Y+H   G+   + H  IK ++I++ +    A++  FG A+   E              GES ++  +                     G   Y++PE+   G  T+KSDVY+ GVVILE++CG +
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHL-FPRGETTKMPLSWPQRKSIILDVAKGLAYLHY--GVKPAIYHRDIKGTNILL-DVDMRARVADFGLAKQSRE--------------GESHLTTRVA--------------------GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 500          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.056e-17
Identity = 63/206 (30.58%), Postives = 108/206 (52.43%), Query Frame = -3
Query:   88 NLQTQDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEP 705
            +L  Q + E ++++ R HH +++ L+G     D   LVY+Y++  +L D L  S   ++  L  W++R+QIA D A GL+Y+H  TG N +++H  +KSS+I++ + +  AK+  FG +           R+  +D    S +++                       G   Y+ PE+ A+   T+KSDVY+ GVV+ ELL G++P
Sbjct:  642 HLNRQFVTE-VALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSS--DYKPLD-WLTRLQIAQDAAKGLEYLH--TGCNPSIIHRDVKSSNILL-DINMRAKVSDFGLS-----------RQTEEDLTHVSSVAK-----------------------GTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKP 806          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.379e-17
Identity = 75/290 (25.86%), Postives = 124/290 (42.76%), Query Frame = -3
Query:    7 YSVSEIRSATNNFLXXXXXXXXXXS-CWRCVLRGRDVIIFQRRFRRNLQTQ-DIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPF----------KYKYDRTRGELTRTSVIDTARMAMDG 840
            ++  E+   TNNF              ++  L    VI  +R  + ++Q   + +  + ++ R HH +++KLLG         LVY+YI   +L D L S +N    V   W  R++IA     GL Y+H     +  ++H  +KS++I++ E    AK+  FG ++L G+ +  +   ++K                                 G   Y+ PE+  T   T+KSDVY  GVV+LELL G+ P           K K D++R       ++DT  +   G
Sbjct:  622 FTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGL-SGKN---GVKLDWTRRLKIALGSGKGLAYLHELA--DPPIIHRDVKSNNILLDE-HLTAKVADFGLSKLVGDPEKAHVTTQVK---------------------------------GTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSG 871          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.071e-17
Identity = 74/263 (28.14%), Postives = 124/263 (47.15%), Query Frame = -3
Query:   94 YSVSEIRSATNNF-LXXXXXXXXXXSCWRCVLR-GRDVIIFQRRFRRNLQTQDIRER-------LSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPE--FTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTA---QLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGE 840
            +S SE+ SAT NF L            +R  L  GR+V I  +R   N + +  +E+       ++ + R HH  +++L+G     +   LVYDY+    L D L    N E   ++++SW  R++IA D A G++Y+HN       ++H  IKSS+I++ + ++ A++  FG +    + G+  + Y+R                                  +  G   Y+ PE+ +  + T KSDVY +GVV+LELL G+
Sbjct:  484 FSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAI--KRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYA--VPPIIHRDIKSSNILL-DSNWVARVSDFGLSLMGPVLGKDHNPYQRP--------------------------------TKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGK 709          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.842e-17
Identity = 64/274 (23.36%), Postives = 127/274 (46.35%), Query Frame = -3
Query:   28 IYSVSEIRSATNNF-LXXXXXXXXXXSCWRCVLRGRDVIIFQR-RFRRNLQTQDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPFKYKYDRTRGELTRTSVIDT 843
            I++  +++ ATN + +          + ++ +L    ++  ++ R   N Q +     + V+ + +H +++KLLG  +  +   LVY++I G +L D L  S    F    +W  R++IA ++A  + Y+H  +G ++ ++H  IK+ +I++ E +  AK+  FG +             K+K    E   +                       +G   Y+ PE+  T +  +KSDVY+ GVV++EL+ G++   ++   T   L    V+ T
Sbjct:   95 IFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSM---FVSSLTWEHRLEIAIEVAGAIAYLH--SGASIPIIHRDIKTENILLDE-NLTAKVADFGAS-------------KLKPMDKEQLTT---------------------MVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLAT 328          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.395e-16
Identity = 57/224 (25.45%), Postives = 107/224 (47.77%), Query Frame = -3
Query:   64 VIIFQRRFRRNLQTQDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPFKYKYDRT 735
            V I + R   N Q +     + V+ + +H +++KLLG  +  +   LVY++I+   L D L  S    F    +W  R+++A ++A  L Y+H++   ++ ++H  IK+++I++ E +  AK+  FG ++L     +D                                       +G   Y+ PE+  TG+  +KSDVY+ GVV++ELL G++   ++  +T
Sbjct:  435 VAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSM---FDSSLTWEHRLRMAVEIAGTLAYLHSSA--SIPIIHRDIKTANILLDE-NLTAKVADFGASRLIPMDKEDL----------------------------------ATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQT 618          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.435e-16
Identity = 57/201 (28.36%), Postives = 100/201 (49.75%), Query Frame = -3
Query:   91 QDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEE 693
            ++ +  + ++ R HH  ++ L+G    D+ + L+Y+ +   NL + L  S  P  +VL SW  R++IA + A G++Y+H  TG    +VH  +KS++I+++E  F AKI  FG +               + F   +E    +V                    G   Y+ PE+  T + + KSDVY+ GVV+LE++ G++
Sbjct:  598 KEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHL--SGKPGCSVL-SWPIRLKIALESAIGIEYLH--TGCKPKIVHRDVKSTNILLSE-EFEAKIADFGLS---------------RSFLIGNEAQPTVV-------------------AGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQD 758          
BLAST of DY263219 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.435e-16
Identity = 68/261 (26.05%), Postives = 116/261 (44.44%), Query Frame = -3
Query:   79 ENPHIYSVSEIRSATNNFLXXXXXXXXXXS-CWRCVLRGRDVIIFQRRFRRNLQ-TQDIRERLSVICRSHHNSIIKLLGASISDDSIYLVYDYINGANLSDCLRSSRNPEFTVLSSWMSRMQIATDLAHGLDYIHNNTGLNLNLVHNHIKSSSIIVTEPSFNAKICHFGTAQLCGETDDDYERKKIKDFKGESEISEEIVEAXXXXXXXXXXXSGRKQFEGLRDYMSPEFRATGIPTQKSDVYAVGVVILELLCGEEPFKY 855
            ++  I++  EI  ATNNF              ++ VL    +   +R    N + T  I   + ++C+ +H S+++LLG  +  +   L+Y++I    L + L  S +  +  L +W  R+QIA   A GL Y+H  +     + H  +KSS+I++ E   NAK+  FG ++L   T+       I  F G                            +G   Y+ PE+      T KSDVY+ GVV+LE++  ++   +
Sbjct:  346 KSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPL-TWRRRLQIAYQTAEGLAYLH--SAAQPPIYHRDVKSSNILLDE-KLNAKVSDFGLSRLVDLTETANNESHI--FTGA---------------------------QGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDF 573          
The following BLAST results are available for this feature:
BLAST of DY263219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
Y5487_ARATH4.141e-2227.84Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH6.188e-1827.20Probable receptor-like protein kinase At2g42960 OS... [more]
Y1105_ARATH8.082e-1828.13Probable receptor-like protein kinase At1g11050 OS... [more]
Y1677_ARATH1.056e-1730.58Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH1.379e-1725.86Probable leucine-rich repeat receptor-like protein... [more]
ACCR3_ARATH3.071e-1728.14Putative serine/threonine-protein kinase-like prot... [more]
WAKLS_ARATH6.842e-1723.36Putative wall-associated receptor kinase-like 16 O... [more]
WAK4_ARATH3.395e-1625.45Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y1755_ARATH4.435e-1628.36Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH4.435e-1626.05Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11AF03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263219 ID=DY263219; Name=DY263219; organism=Citrus clementina; type=EST; length=1298bp
ATCGCCACCGTCCATCGCCATTCTAGCGGTGTCTATCACCGACGTCCTAG
TAAGCTCGCCACGTGTCCTATCGTACTTGTATTTAAACGGCTCTTCTCCG
CACAACAGCTCCAGTATCACCACGCCTACAGCGTACACGTCAGATTTCTG
CGTCGGGATCCCCGTCGCTCGAAACTCCGGCGACATGTAATCTCTCAATC
CTTCAAATTGCTTCCTTCCACTACTCGATCTCGTAAACGGCGACGGCGTC
GGCGTCGCTTCAACTATCTCTTCGGAAATTTCGCTTTCTCCTTTAAAATC
CTTAATTTTCTTTCTTTCATAGTCGTCATCGGTCTCTCCGCACAACTGAG
CCGTACCGAAATGGCAAATCTTAGCGTTAAACGACGGCTCAGTAACTATA
ATGCTGCTACTCTTAATATGATTATGCACTAGGTTCAAATTCAGTCCGGT
GTTGTTATGAATGTAATCAAGGCCGTGAGCGAGATCCGTAGCGATCTGCA
TTCTGGACATCCACGAGGACAAAACGGTAAATTCCGGATTCCTCGAGCTT
CTCAAGCAATCGGATAAATTGGCACCGTTGATGTAGTCATACACGAGGTA
TATGGAATCATCAGAGATCGAAGCGCCGAGAAGCTTGATTATGCTGTTGT
GATGGCTCCGGCAGATCACCGACAATCTTTCTCGTATGTCTTGAGTCTGG
AGGTTGCGGCGGAACCTTCGCTGGAAGATAATGACGTCTCTGCCACGCAA
GACGCAGCGCCAGCAGCTGGTGGAAGAAGAGCTCGAGTGCTTTTTTGAGA
GGAAGTTGTTGGTGGCGGAGCGGATTTCGGAGACGCTGTAGATGTGGGGG
TTCTCGGAGATGGATTCGCGGAGGCTGGTTAGCGAGGTTCGGCTCGAAGT
GGATGTGGTAATTGTCTCTGGGAGTGAGGAAGAGGGTTTACCTTGTGATG
ATGAAGAGCTTGCTGCTGCTGCCGCTGCGGCGTAATCCGCGCTGGGAAAA
AGGTTTGGGGAAAGAAGGGGGGGCAAGGGGAAGTGAGCTGGGGTGAAAGG
GAATTTCGGCGGGGGGCAGGGGGAAGGGATTTGGGGGTGGGCCAAACTGG
GGGGGGGAATCGGAAGGCTTTGTTATCCATTTTGGTCTTTCCCAAAATTA
GGGGGTTTGGGGGTATTTTGGATTTTTGGGAAAAATAAAAGGGGAAATTT
TTAAATTACTTTTACCGTAATGGGAAAAAAGAAAAATTTGAATGGGTCTT
CTTTTGGGAAAGATTTTGGAAAAACCACCCGCCGGCGGAGAACAGACA
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