DY263234

Overview
NameDY263234
Unique NameDY263234
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263234 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.167e-11
Identity = 49/123 (39.84%), Postives = 59/123 (47.97%), Query Frame = -2 
Query:  239 AGAFALMTNYASGQLDNVSL-PEGKTVEVLPARKADEGGAKVEEAEE-------LDLTPRLFGVSIGAKRARR------XXXXXXXXXXXXXXXXEPGSDVKSEPLDANNDHHQEPPWLELGK 565
            A  + LM N+  GQ D   L PEGK +++LP R+         E E         DLTPRLFGVSIG KRARR                      E  SDVK+EP++ NN  +    WLELGK
Sbjct:  255 ANIYTLMANFTPGQEDCAHLLPEGKPLDLLPERQEMSEAIMASEIETGIGLKLGEDLTPRLFGVSIGVKRARREEELGAAEEEDDDRREAAAQEGEQSSDVKAEPMEENNSGNHNGSWLELGK 377
The following BLAST results are available for this feature:
BLAST of DY263234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HFB2B_ARATH1.167e-1139.84Heat stress transcription factor B-2b OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11AG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263234 ID=DY263234; Name=DY263234; organism=Citrus clementina; type=EST; length=1328bp
ATAACTTGAATCAGTTGCTTTCTACCTTTTCGTCATCGCCTCAGGAGTTT
GCCTTCTCTCATTTTTCAGCCGCTTTGCTGCTCTCCGCACTCCTTTCACA
TTCCCACCTTCCTCGGATCAAAAAGCGCTTGCCTTTTAATAAGCAAACAA
TTTGACCGGATCCGCACATATCATCACGTGGCGCCCCATCACCACGTGCA
CCAACCATATTAATCCATATCGTCGTCAGTTCTCACGATTTACCCAGTTC
TAGCCAAGGAGGTTCCTGATGATGATCATTATTCGCATCCAACGGCTCTG
ATTTAACATCCGACCCCGGCTCATTCTCACCTTGCTGTTGCTGCAGTTGA
TTCTGCTCTTCTTCCTCTTCTCTCCTCGCACGCTTCGCCCCAATCGACAC
ACCAAACAACCTCGGAGTCAGATCCAACTCCTCCGCCTCCTCCACCTTCG
CGCCGCCTTCATCGGCCTTCCTCGCCGGCAGTACCTCCACCGTCTTCCCC
TCCGGCAGACTTACGTTGTCCAGCTGACCGGACGCGTAATTCGTCATTAA
AGCGAAAGCTCCGGCATCGTCGTACAACTCGTAGTTCTAATCACGGTCGT
AGTCGGCACCGCCACCGGCGACGAATTAGCTGATATCACCTGTTCCTCGC
CGGAGTTCGTCGGCGAAATCGACCGTGCAACCGCAGCGACCGTCACAGTC
CCCGCCGTGGCAGCTGTGAACCAGAACAGGGAAACAAGATGCAGCAGAGA
AAATCAACTGCGTCGGGGCGGCCATCTGGCACCGACGGATCTGATTTTTC
GTATCGGATGGTCGTCGATTCCCGATACACAAAGGTGGCTAGAGGGAAGT
CTCGTCTCTCTAAACTCATTTTCGCTCAGGCTGGCATTCAATTGATAGGA
ATTGTGTTCACGTTTGTATTAATTCGAAAGGAGAGGGTCCCAATCCACTT
TCTCTTTCCTCTGCTTCTCTTGAATTGGTTTCTCTTATAATTGGAAGAAT
AGGTCAAAAGCGCAACCCAAGTCAGTCTCCTGGAAATTTTGCTTGGTTGC
ATCGTCTATTGGTGTGCTTTCTCTCTGTATTTATGGTCGCCCGGAATAAT
TCAATTTTAAAAGGGTAAAAACAAACCAAAACATTTGGGGAAAAAAAAAA
AATTGAAAATTTTTTGAAACAGGCCACGGGTTTCCGATTGGGAAATACCG
GGAAAAAAAAAATTTTTTTGGGCAAACCCATCAAAATTTTTCCCCCCCCC
GCAAAAAAAAAAAGGTCCCTCCCCCCCCCCAAAAAAAAAACCTTCTTTTA
TAATTAAATATTTTTCCCCACTTAAATA
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