DY263270 | Citrus Genome Database

Overview


Name	DY263270
Unique Name	DY263270
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1236

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 2.309e-109
Identity = 157/232 (67.67%), Postives = 185/232 (79.74%), Query Frame = 2

Query:  104 MWNSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFKNVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MWNSAEN FSR++SF+DE+EDEE LRWAAL+RLPTY+R RRGIF+++VG+ KE+ +  L   EQRL+LDRLVN+VE+DPE+FF R+RKR +AVDL+ PKIEVRFQNL VESFVH+GSRALPTIPNFI NM E LLR + +  G R+KLTILD +SG+IRPSRLTLLLGPPSSGK               Q SGKITYNG+  KE + PRTSAYVSQQDW VAEMTVR+   F
Sbjct:    1 MWNSAENAFSRSTSFKDEIEDEEELRWAALQRLPTYSRIRRGIFRDMVGEPKEIQIGNLEASEQRLLLDRLVNSVENDPEQFFARVRKRFDAVDLKFPKIEVRFQNLMVESFVHVGSRALPTIPNFIINMAEGLLRNIHVIGGKRNKLTILDGISGVIRPSRLTLLLGPPSSGKTTLLLALAGRLGTNLQTSGKITYNGYDLKEIIAPRTSAYVSQQDWHVAEMTVRQTLEF 232

HSP 2 Score: 78.5666 bits (192), Expect = 2.309e-109
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL+FAGRCQGVG KYDM+ ELARREK+ GI PDE+LD FMK  ALGG +
Sbjct:  228 QTLEFAGRCQGVGFKYDMLLELARREKLAGIVPDEDLDIFMKSLALGGME 277

HSP 3 Score: 40.817 bits (94), Expect = 2.309e-109
Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1

Query:  910 KSLPWGGKKTILVVKYIMKILGLEPCAEHIGKEIKSLKESWEAKKNALKKRV---NYLFGPAQNTF 1098
            KSL  GG +T LVV+Y+MKILGL+ CA+ +  +     E  +      KKR+     L GPA+  F
Sbjct:  269 KSLALGGMETSLVVEYVMKILGLDTCADTLVGD-----EMIKGISGGQKKRLTTGELLVGPARVLF 329

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 4.406e-88
Identity = 141/241 (58.51%), Postives = 176/241 (73.03%), Query Frame = 2

Query:  104 MWNSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFKN-------VVGD--VKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MW +AE  F+R+ S+R+E +++EALRWAAL+RLPT ARARRG+ ++       V GD  + EVDV+ L+  ++  ++DRL+ A   D E FF R+R R +AV +E PKIEVR+++LTV+++VH+GSRALPTIPNFI NMTEA LR LRIYRG R KL ILD++SGIIRPSR+TLLLGPPSSGK               +VSG ITYNGH   EFVP RTSAYVSQQDW  +EMTVRE   F
Sbjct:    1 MW-AAEAAFARSGSWREEEDEQEALRWAALQRLPTVARARRGLLRSPAPGEDRVQGDDALCEVDVAGLSPGDRTALVDRLL-ADSGDVEDFFRRIRSRFDAVQIEFPKIEVRYEDLTVDAYVHVGSRALPTIPNFICNMTEAFLRHLRIYRGGRVKLPILDNVSGIIRPSRMTLLLGPPSSGKTTLLLALAGRLGPGLKVSGNITYNGHHLNEFVPQRTSAYVSQQDWHASEMTVRETLEF 239

HSP 2 Score: 75.0998 bits (183), Expect = 4.406e-88
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL+FAGRCQGVG KYDM+ EL RREK  GIKPDE+LD FMK  AL G++
Sbjct:  235 ETLEFAGRCQGVGIKYDMLVELLRREKNEGIKPDEDLDVFMKALALEGKQ 284

HSP 3 Score: 34.6538 bits (78), Expect = 4.406e-88
Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 1

Query:  910 KSLPWGGKKTILVVKYIMKILGLEPCAEHI 999
            K+L   GK+T LV +YIMK+ GL+ CA+ I
Sbjct:  276 KALALEGKQTSLVAEYIMKVYGLDICADTI 305

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.355e-75
Identity = 123/239 (51.46%), Postives = 157/239 (65.69%), Query Frame = 2

Query:  104 MWNSAENVFSRTSS-FRDEVEDEEALRWAALERLPTYARARRGIFK------NVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MW S  +VFSR+SS F+DE +DEEALRWAALERLPTY R RRGI           G+  EVDV  L  +E R +++RLV A +DD ERF  ++R+R + V ++ P IEVRF+NL VE+ VH+G+R LPT+ N + N  EA+   L I    +  +T+L D+SGII+P R+TLLLGPP SGK               +VSGK+TYNGHG  EFVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   17 MWRSGGDVFSRSSSRFQDEDDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDRVGIDYPTIEVRFENLEVEADVHVGNRGLPTLLNSVTNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGKVTYNGHGMHEFVPERTAAYISQHDLHIGEMTVRETLAF 255

HSP 2 Score: 71.2478 bits (173), Expect = 1.355e-75
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQKN 938
            +TL F+ RCQGVG++Y+M+TELARREK   IKPD ++D +MK  A+GGQ++
Sbjct:  251 ETLAFSARCQGVGTRYEMLTELARREKAANIKPDHDIDIYMKASAMGGQES 301

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.351e-69
Identity = 104/232 (44.83%), Postives = 149/232 (64.22%), Query Frame = 2

Query:  110 NSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIF--KNVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            +S   +FSR+S    E +DEEALRWAALE+LPT+ R R+GI    +  G + E+D+ +L  Q+ + +L+RL+   +D+ E+   +++KR + V ++LP IEVRF +L VE+ VH+G RALPT  NFI N  +  L  L +    + K TIL+D+SGI++P R+ LLLGPPSSGK               + +G++TYNGHG  EFVP RT+AY+ Q D  + EMTVRE   +
Sbjct:   23 DSGREIFSRSSR---EEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDRVGIDLPTIEVRFDHLKVEAEVHVGGRALPTFVNFISNFADKFLNTLHLVPNRKKKFTILNDVSGIVKPGRMALLLGPPSSGKTTLLLALAGKLDQELKQTGRVTYNGHGMNEFVPQRTAAYIGQNDVHIGEMTVRETFAY 251

HSP 2 Score: 64.3142 bits (155), Expect = 1.351e-69
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +T  +A R QGVGS+YDM+TELARREK   IKPD ++D FMK  +  G+K
Sbjct:  247 ETFAYAARFQGVGSRYDMLTELARREKEANIKPDPDIDIFMKAMSTAGEK 296

HSP 3 Score: 33.4982 bits (75), Expect = 1.351e-69
Identity = 23/72 (31.94%), Postives = 37/72 (51.39%), Query Frame = 1

Query:  910 KSLPWGGKKTILVVKYIMKILGLEPCAEHIGKEIKSLKESWEAKKNALKKRV---NYLFGPAQNTFSGKKNT 1116
            K++   G+KT ++  YI+KILGLE CA+ +  +     +         KKRV     L GP++  F  + +T
Sbjct:  288 KAMSTAGEKTNVMTDYILKILGLEVCADTMVGD-----DMLRGISGGQKKRVTTGEMLVGPSRALFMDEIST 354

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.983e-69
Identity = 108/230 (46.96%), Postives = 155/230 (67.39%), Query Frame = 2

Query:  110 NSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFKNVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            N+   +FSR+S  RDE +DEEAL+WAALE+LPT+ R R+G+     G   EVD+++L  QE++ +L+RLV   ++D E+F  +++ R + V ++LP IEVR+++L +++  ++GSR+LPT  NF+ N  E LL  L I    + +LTIL D+SGII+P R+TLLLGPPSSGK               +V+GK++YNGH   EFVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   32 NNGVEIFSRSS--RDE-DDEEALKWAALEKLPTFDRLRKGLLFGSQGAAAEVDINDLGFQERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDLPTIEVRYEHLNIDADAYVGSRSLPTFMNFMTNFVETLLNSLHILSSRKRQLTILKDISGIIKPCRMTLLLGPPSSGKTTLLLALAGKLDPALKVTGKVSYNGHELHEFVPQRTAAYISQHDLHIGEMTVRETLEF 258

HSP 2 Score: 64.3142 bits (155), Expect = 2.983e-69
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL+F+ RCQGVGS+++M+ EL+RREK   IKPD ++D +MK  A  GQ+
Sbjct:  254 ETLEFSARCQGVGSRFEMLAELSRREKAANIKPDADIDIYMKAAATEGQE 303

HSP 3 Score: 26.9498 bits (58), Expect = 2.983e-69
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 1

Query:  928 GKKTILVVKYIMKILGLEPCAE 993
            G++  +V  Y++KILGL+ CA+
Sbjct:  301 GQEANVVTDYVLKILGLDICAD 322

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.884e-69
Identity = 109/230 (47.39%), Postives = 151/230 (65.65%), Query Frame = 2

Query:  110 NSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFKNVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            N+   VFSR++  RDE +DEEAL+WAALE+LPTY R R+GI     G   EVDV +  V E++ +L+RLV   ++D E+F  +++ R + V ++ P IEVRF++L +++  ++GSRALPT  NFI N  E LL  + I    + ++TIL D+SGI++P R+TLLLGPP SGK               +V+GK+TYNGH   EFVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   36 NNGAEVFSRSA--RDE-DDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVDVDDSGVLERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDFPSIEVRFEHLNIDADAYVGSRALPTFTNFISNFVEGLLDSIHILPSKKRQVTILKDVSGIVKPCRMTLLLGPPGSGKTTLLLALAGKLDSALKVTGKVTYNGHELHEFVPQRTAAYISQHDLHIGEMTVRETLEF 262

HSP 2 Score: 65.855 bits (159), Expect = 3.884e-69
Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL+F+ RCQGVGS+Y+M+ EL+RREK   IKPD ++D FMK  +  GQ+
Sbjct:  258 ETLEFSARCQGVGSRYEMLAELSRREKAANIKPDADIDMFMKAASTEGQE 307

HSP 3 Score: 27.335 bits (59), Expect = 3.884e-69
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 1

Query:  928 GKKTILVVKYIMKILGLEPCAE 993
            G++  +V  YI+KILGL+ CA+
Sbjct:  305 GQEAKVVTDYILKILGLDICAD 326

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 9.233e-68
Identity = 108/239 (45.19%), Postives = 157/239 (65.69%), Query Frame = 2

Query:  104 MWNSAENVFSRTSS--FRDEVEDEEA-LRWAALERLPTYARARRGIFKNVVGDVK----EVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            ++  + +VF +  S  +R+  E+EE  L+WAA++RLPTY R R+G+ K V+ + +    EVD+++L  Q+++++++ ++  VEDD E+F  R+R R + V +E+PKIEVRFQNL+V    ++G+RALPT+ N   N  EA+L  + +    +  + IL+D+SGIIRPSR+TLLLGPP SGK               +V+GKITY GH F EFVP RTSAY+SQ D    EMTVRE   F
Sbjct:   31 VFGGSSDVFMKNYSTRWREMAEEEEKELKWAAIDRLPTYNRLRKGMMKEVMSNGRVVHHEVDMTKLGNQDKKVLMESILKVVEDDNEQFLRRLRNRTDRVGIEIPKIEVRFQNLSVGGDAYVGTRALPTLLNSTLNTIEAVLGLIHLSPSKKRVVKILEDVSGIIRPSRMTLLLGPPGSGKTTFLKALAGKSEKDLRVNGKITYCGHEFHEFVPQRTSAYISQHDLHHGEMTVRETLDF 269

HSP 2 Score: 68.1662 bits (165), Expect = 9.233e-68
Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TLDFAGRC GVG++YD++ EL+RREK  GI PD  +D FMK  A+ GQ+
Sbjct:  265 ETLDFAGRCLGVGTRYDLLVELSRREKEAGIMPDPQIDAFMKATAIDGQE 314

HSP 3 Score: 31.5722 bits (70), Expect = 9.233e-68
Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 1

Query:  928 GKKTILVVKYIMKILGLEPCAE-HIGKEIKSLKESWEAKKNALKKRV---NYLFGPAQNTF 1098
            G++T L+  Y++KILGL+ CA+  +G +++             KKRV     L GPA+  F
Sbjct:  312 GQETSLITDYVLKILGLDICADIMVGDDMR------RGISGGQKKRVTTGEMLVGPAKAFF 366

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.501e-67
Identity = 107/239 (44.77%), Postives = 144/239 (60.25%), Query Frame = 2

Query:  104 MWNSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFK-------NVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MW   ++VFSR+S    E +DEEALRWAALE+LPTY R RR I            G    VDV  L  +E+R +L+RLV   ++D E+F  +++ R + V +++P IEVRF++L  E+ V +G+  LPT+ N I N  E     L I    +  + +L D+SGII+P R+TLLLGPP SGK               + SGK+TYNGHG +EFVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   26 MWRRGDDVFSRSSR---EEDDEEALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIEVRFEHLEAEAEVRVGNSGLPTVLNSITNTLEEAGNALGILPNRKQTMPVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQHDLHIGEMTVRETLAF 261

HSP 2 Score: 70.8626 bits (172), Expect = 4.501e-67
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL F+ RCQGVGS++DM+TEL+RREK   IKPD ++D FMK  A+GGQ+
Sbjct:  257 ETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKAAAMGGQE 306

HSP 3 Score: 30.8018 bits (68), Expect = 4.501e-67
Identity = 23/72 (31.94%), Postives = 35/72 (48.61%), Query Frame = 1

Query:  910 KSLPWGGKKTILVVKYIMKILGLEPCAEHIGKEIKSLKESWEAKKNALKKRV---NYLFGPAQNTFSGKKNT 1116
            K+   GG++  +   YI+KILGLE CA+ +  +     E         +KRV     L GPA+  F  + +T
Sbjct:  298 KAAAMGGQEANVNTDYILKILGLEICADTMVGD-----EMLRGISGGQRKRVTTGEMLVGPARALFMDEIST 364

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.501e-67
Identity = 107/239 (44.77%), Postives = 144/239 (60.25%), Query Frame = 2

Query:  104 MWNSAENVFSRTSSFRDEVEDEEALRWAALERLPTYARARRGIFK-------NVVGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MW   ++VFSR+S    E +DEEALRWAALE+LPTY R RR I            G    VDV  L  +E+R +L+RLV   ++D E+F  +++ R + V +++P IEVRF++L  E+ V +G+  LPT+ N I N  E     L I    +  + +L D+SGII+P R+TLLLGPP SGK               + SGK+TYNGHG +EFVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   26 MWRRGDDVFSRSSR---EEDDEEALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIEVRFEHLEAEAEVRVGNSGLPTVLNSITNTLEEAGNALGILPNRKQTMPVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQHDLHIGEMTVRETLAF 261

HSP 2 Score: 70.8626 bits (172), Expect = 4.501e-67
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL F+ RCQGVGS++DM+TEL+RREK   IKPD ++D FMK  A+GGQ+
Sbjct:  257 ETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKAAAMGGQE 306

HSP 3 Score: 30.8018 bits (68), Expect = 4.501e-67
Identity = 23/72 (31.94%), Postives = 35/72 (48.61%), Query Frame = 1

Query:  910 KSLPWGGKKTILVVKYIMKILGLEPCAEHIGKEIKSLKESWEAKKNALKKRV---NYLFGPAQNTFSGKKNT 1116
            K+   GG++  +   YI+KILGLE CA+ +  +     E         +KRV     L GPA+  F  + +T
Sbjct:  298 KAAAMGGQEANVNTDYILKILGLEICADTMVGD-----EMLRGISGGQRKRVTTGEMLVGPARALFMDEIST 364

[Close]

BLAST of DY263270 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.631e-67
Identity = 111/243 (45.68%), Postives = 148/243 (60.91%), Query Frame = 2

Query:  104 MWNSAEN-VFSRT---SSFRDEVEDEEALRWAALERLPTYARARRGIFKNVV-------GDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKXXXXXXXXXXXXXXXQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRENSGF 799
            MW SA+N VFSR+   SS  D  +DEEALRWAALE+LPTY R RR +   V           K VDV  L  QE+R +L+RLV   EDD ERF  ++++R + V +++P IEVRF++L  E+ V +G+  LPT+ N + N  E     L I    +  + IL D+SGI++P R+TLLLGPP SGK               + SG++TYNGH  ++FVP RT+AY+SQ D  + EMTVRE   F
Sbjct:   28 MWWSADNGVFSRSRASSSGEDGEDDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGGGEAGKKVVDVLSLGPQERRALLERLVRVAEDDNERFLLKLKERIDRVGIDIPTIEVRFEHLEAEAEVRVGNSGLPTVLNSMTNKLEGAANALGILPNKKQTMPILHDVSGIVKPRRMTLLLGPPGSGKTTLLLALAGRLGKDIKFSGQVTYNGHQMEDFVPQRTAAYISQHDLHIGEMTVRETLSF 270

HSP 2 Score: 68.5514 bits (166), Expect = 7.631e-67
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3

Query:  786 KTLDFAGRCQGVGSKYDMITELARREKITGIKPDENLDFFMKVFALGGQK 935
            +TL F+ RCQGVGS++DM+TEL+RREK   IKPD ++D FMK  A+ GQ+
Sbjct:  266 ETLSFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKASAMEGQE 315

HSP 3 Score: 30.0314 bits (66), Expect = 7.631e-67
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1

Query:  928 GKKTILVVKYIMKILGLEPCAE 993
            G++T L+  YI+KILGL+ CA+
Sbjct:  313 GQETNLITDYILKILGLDICAD 334

The following BLAST results are available for this feature:

BLAST of DY263270 vs. ExPASy Swiss-Prot

BLAST of DY263270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31


Match Name	E-value	Identity	Description
AB32G_ARATH	2.309e-109	67.67	ABC transporter G family member 32 OS=Arabidopsis ...	[more]
PDR6_ORYSJ	4.406e-88	58.51	Pleiotropic drug resistance protein 6 OS=Oryza sat...	[more]
PDR4_ORYSJ	1.355e-75	51.46	Pleiotropic drug resistance protein 4 OS=Oryza sat...	[more]
AB40G_ARATH	1.351e-69	44.83	ABC transporter G family member 40 OS=Arabidopsis ...	[more]
PDR1_TOBAC	2.983e-69	46.96	Pleiotropic drug resistance protein 1 OS=Nicotiana...	[more]
PDR1_NICPL	3.884e-69	47.39	Pleiotropic drug resistance protein 1 OS=Nicotiana...	[more]
PDR2_NICPL	9.233e-68	45.19	Pleiotropic drug resistance protein 2 OS=Nicotiana...	[more]
PDR3_ORYSJ	4.501e-67	44.77	Pleiotropic drug resistance protein 3 OS=Oryza sat...	[more]
PDR3_ORYSI	4.501e-67	44.77	Pleiotropic drug resistance protein 3 OS=Oryza sat...	[more]
PDR2_ORYSJ	7.631e-67	45.68	Probable pleiotropic drug resistance protein 2 OS=...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA11BB11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY263270 ID=DY263270; Name=DY263270; organism=Citrus clementina; type=EST; length=1236bp
ATCATTTGTGATCTTACTTTTAAATAACATCATTACAGCTTCTTTCTCTC
TCTCTCTCTCTCTTTTCTCTGTGGCTTTGTTTTGTGATAATTAATTAGAT
CGGATGTGGAACTCGGCGGAGAATGTGTTTTCTAGAACGTCGTCGTTTAG
GGACGAGGTAGAGGACGAGGAGGCGTTAAGGTGGGCGGCGCTTGAGCGGC
TGCCGACTTACGCTCGAGCTCGCCGTGGCATTTTCAAGAACGTGGTCGGT
GACGTTAAGGAGGTCGATGTGAGTGAGCTGGCGGTTCAGGAACAGAGGCT
TGTGTTGGACCGGTTGGTGAATGCTGTTGAAGATGATCCGGAGCGCTTCT
TTGATCGCATGAGAAAGAGATGCGAAGCAGTTGATTTGGAGCTTCCAAAG
ATTGAGGTTCGATTTCAGAATCTGACAGTTGAATCTTTTGTTCACCTTGG
AAGTAGAGCGCTACCAACCATTCCCAATTTTATTTTTAACATGACTGAGG
CTCTTTTGAGGCAATTGCGGATATATCGGGGAAACAGGAGCAAATTGACA
ATTTTGGATGACTTAAGCGGGATTATTAGACCTTCCAGATTGACCCTGTT
GCTGGGTCCTCCGAGCTCAGGAAAGACTACACTATTGCTAGCTCTTGCTG
GGCGCCTCGGACATCATTTACAGGTGTCAGGGAAAATTACATACAATGGA
CACGGGTTTAAAGAGTTTGTTCCTCCAAGGACGTCCGCTTATGTCAGTCA
ACAGGATTGGCAAGTGGCAGAGATGACAGTACGGGAAAACTCTGGATTTT
GCAGGACGGTGTCAAGGTGTTGGATCCAAATATGATATGATTACGGAACT
TGCAAGAAGAGAAAAAATAACTGGGATAAAACCTGATGAAAATCTTGATT
TTTTTATGAAAGTCTTTGCCCTGGGGGGGCAAAAAAACTATCCTTGTGGT
GAAGTACATCATGAAAATTCTAGGTTTGGAACCTTGTGCTGAACACATTG
GTAAGGAAATAAAAAGCTTAAAGGAATCTTGGGAGGCCAAAAAAAACGCG
CTGAAAAAAAGGGTGAATTATTTATTTGGGCCCGCCCAAAATACTTTTTC
CGGGAAAAAAAATACAAAGTGGCCCTTGAAAAGTTCAACTACCTTTTTAA
AATCATCAAAAAATCTAAAAAACTTTCTCCCCCCGGCCCTTTTTAGGGGG
AACCCCTGGTTTTTTTTTTTCCTCTTTCTCACCCCG