DY263271

Overview
NameDY263271
Unique NameDY263271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1211
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.825e-71
Identity = 139/209 (66.51%), Postives = 164/209 (78.47%), Query Frame = 3
Query:  429 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            +K EIA+HP+Y+QLLAAHV+CLRVATPIDQLP+I+AQL+ SHH+LRSY S            S H+RQELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S  D    HD+ GFGPLLPTE+ERSLM R RQE++   + GF    ++   EEI+RKRRAGK PG TT
Sbjct:   31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVG-------FSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGF-KSRIEDVREEIMRKRRAGKLPGDTT 231          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.676e-70
Identity = 139/209 (66.51%), Postives = 164/209 (78.47%), Query Frame = 3
Query:  429 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            +K EIA+HP+YEQLLAAHV+CLRVATPIDQLP+I+AQL+QSHH+LRSY S     +        H+R ELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S  D    HD+ GFGPLLPTE+ERSLM R RQE++   + GF    ++   EEI+RKRRAGK PG TT
Sbjct:   29 LKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGF-KSRIEDVREEIMRKRRAGKLPGDTT 228          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.795e-64
Identity = 133/210 (63.33%), Postives = 162/210 (77.14%), Query Frame = 3
Query:  423 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDL--HMDFSLDQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS  +L SY +      ++   LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+    ++  +D   SD HDLMGFGPL+PT++ERSLM R RQE++   + GF    ++   EEILRKRRAGK PG TT
Sbjct:   51 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HHRPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGF-KSRIEDVREEILRKRRAGKLPGDTT 252          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.127e-58
Identity = 121/206 (58.74%), Postives = 152/206 (73.79%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+  Y +L      ++        +ELD F+  Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEGT ATMSDDEDD +  D +L     + HD MGFGPL+PTE+ERSLM R RQE++   + G+  + + +  EEILRKRRAGK PG TT
Sbjct:  168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDD--------KELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI-REEILRKRRAGKLPGDTT 364          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 5.592e-58
Identity = 123/211 (58.29%), Postives = 155/211 (73.46%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+  Y +L+ A       L   + +ELD+F+  Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEGTGATMS+DED        +Q  SD+H      D +GFGPL+PTE+ERSLM R RQE++   + G+  + + +  EEILRKRRAGK PG TT
Sbjct:  124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQG-----LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDI-REEILRKRRAGKLPGDTT 320          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.627e-57
Identity = 123/211 (58.29%), Postives = 153/211 (72.51%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS HV+  Y +L  A           + +ELD F+  Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED        +Q  SD++      D++GFGPL+PTE+ERSLM R RQE++   + G+  + + +  EEILRKRRAGK PG TT
Sbjct:  160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG-----LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI-REEILRKRRAGKLPGDTT 356          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.055e-56
Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+  Y  L Q          P + ++LD F+  Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEGTGATMSDD+DD    D +      D  D MGFGPL+PTE+ERSLM R RQE++   + G+  + + +  EEILRKRRAGK PG TT
Sbjct:  164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ-------PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDI-REEILRKRRAGKLPGDTT 361          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.684e-54
Identity = 118/206 (57.28%), Postives = 148/206 (71.84%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS  V+  Y +L  A   +       + +ELD F+  Y+++LC+FKEQLQQHVRVHA+EAVM C E+E  LQ+LTG S GEGTGATMSD EDD    + ++   + D  D MGFG  LPTE+ERSLM R RQE++   + G+  + + +  EEILRKRRAGK PG TT
Sbjct:  109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGD-------DGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDI-REEILRKRRAGKLPGDTT 304          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 4.585e-52
Identity = 112/208 (53.85%), Postives = 144/208 (69.23%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSL---DQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGTT 1046
            KA I  HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V   Y +L    +N          +ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+  C EIE +LQ+LTGVS  E  G TMSDDEDD  ++  +   D S   S  LMGFGPL+PTE ERSLM R ++E++   + GF  + + +  EEI+RKRRAGK PG TT
Sbjct:  119 KAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLGVVVDN----------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDI-REEIMRKRRAGKLPGDTT 315          
BLAST of DY263271 vs. ExPASy Swiss-Prot
Match: KNOS2_ORYSJ (Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica GN=HOS58 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 5.069e-51
Identity = 112/204 (54.90%), Postives = 141/204 (69.12%), Query Frame = 3
Query:  432 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMGRGRQEVED*TEAGFLNQNLKMEEEEILRKRRAGKWPGGT 1043
            KA +A+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A     L +  +   A         P   +ELD F+  Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+     +     +D  D MGFGPL+ TE ERSL+ R R E+++  + G+  + L    EEILRKRRAGK PG T
Sbjct:   43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGG-------PSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGY-KEKLVDIREEILRKRRAGKLPGDT 238          
The following BLAST results are available for this feature:
BLAST of DY263271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HD1_BRANA9.825e-7166.51Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2... [more]
KNAT7_ARATH1.676e-7066.51Homeobox protein knotted-1-like 7 OS=Arabidopsis t... [more]
KNOS3_ORYSJ1.795e-6463.33Homeobox protein knotted-1-like 3 OS=Oryza sativa ... [more]
KNAP3_MALDO1.127e-5858.74Homeobox protein knotted-1-like 3 OS=Malus domesti... [more]
KNAT4_ARATH5.592e-5858.29Homeobox protein knotted-1-like 4 OS=Arabidopsis t... [more]
KNAT3_ARATH1.627e-5758.29Homeobox protein knotted-1-like 3 OS=Arabidopsis t... [more]
LET12_SOLLC1.055e-5657.28Homeobox protein knotted-1-like LET12 OS=Solanum l... [more]
KNOSD_ORYSJ1.684e-5457.28Homeobox protein knotted-1-like 13 OS=Oryza sativa... [more]
KNAT5_ARATH4.585e-5253.85Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOS2_ORYSJ5.069e-5154.90Homeobox protein knotted-1-like 2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11BB12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263271 ID=DY263271; Name=DY263271; organism=Citrus clementina; type=EST; length=1211bp
AAATATGCTTTTGCTTTGTTTGTAATTTTTCTGAGCGTCTGCAAACCCTG
TTGATGATTCAGAAAAATTTTGAGTCTCAGATCCCAAGAGACATAACAAT
GATCCTCTCTCTTACACCATTAACGAGAAAACCAAACACAGTCTAGTGTC
TCCTTTTCTTTTCTTTTTGTTTCCTCTTTATCTTCATCATCATCATCATC
AAAGCACAGGCCGCTTTCTCTGTGGTCCTGAAATCCATTTCTTTAAATTT
CTTTGCAACCCCTTTTTGTTTTTTTTTTCATTTTGTGGTTTGATCACTCT
ATTCTATAATATTTTCATTCAGTATGCAAGAACCGAGCTTAGGGGTAATG
GGTAGTAGCAGCAGCGGCGGCGGAGGCGGCGGCGGTGACGTGTCCGGTCA
TCACGACCAAACAGCAACTGTTCAACTCATCAAAGCAGAAATAGCAAGTC
ACCCGTTATACGAACAACTATTAGCAGCGCACGTGTCTTGTCTCCGTGTA
GCTACCCCGATTGATCAGTTGCCTCTTATTGATGCACAGTTAGCTCAGTC
CCACCACGTTCTCAGGTCTTATGGTTCTCTTCAACAAGCTAATAATAATA
ATAACCACTCTCTCTCTCCCCATGAAAGGCAGGAGCTCGACAACTTCTTG
GCACAGTATTTGATAGTATTGTGTACTTTCAAAGAGCAGCTTCAGCAGCA
CGTCAGAGTCCATGCCGTTGAAGCTGTCATGGGCTGCCGTGAAATTGAGA
ATACTTTGCAAGCTCTCACCGGAGTATCATTGGGTGAAGGGACAGGCGCA
ACAATGTCTGACGATGAGGATGACCTACATATGGATTTCTCTCTTGATCA
ATCTGCTTCTGATAGTCATGATTTGATGGGGTTTGGTCCATTACTTCCTA
CTGAAACTGAAAGGTCTCTTATGGGAAGAGGTAGACAGGAGGTTGAAGAT
TGAACTGAAGCAGGGTTTTTAAATCAGAATTTGAAGATGGAAGAAGAGGA
AATATTGAGAAAAAGAAGGGCGGGAAAATGGCCCGGGGGAACCACTTTCA
GGGCTCCAAGATTGGGGGGCCGCCGCCCTCCAAAGGGCCTTAACCCAACT
GAAAAAGGAAAGGGAAAAACCTGGGGGGAGGGAAACGGGGCTGGGGGCCC
AAAAGAAAAATCCAAAAACGGGGGGTTTACTCAACCAAAAAGGAAAGGGC
CCACGGGGGGC
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