DY263273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 438.728 bits (1127), Expect = 3.678e-122 Identity = 213/312 (68.27%), Postives = 252/312 (80.77%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGGVLEGQGAGLWACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQGFGG*NQWSDIPRYS-WDLRQTEVGVKLD 1071 G+TDS K+FL+AWA+AC S IYVP G + L +VVF G CKNN IT RI GTLVAP+DY VIGNA NWI F HV+GV+I+GG+L+GQG LWACK +CPSGATTL FS+S+N+V++GLAS++SQMFHIVIN +V++QGV+VS +G+SPNTDGIHVQ SSGVTIL+SKI TGDDCVS+GPG +NLWIE VACGPGHGISIGSLGKEQ+EAGVQNVTV +VTF+GTQNG+RIKSWGR S+GFARNILFQHA M NV+NPI+IDQ YCP+N+ CPGQ G Q SD+ TEV VK D Sbjct: 39 GKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVSG--VQISDVTYEDIHGTSATEVAVKFD 348
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 8.538e-95 Identity = 182/345 (52.75%), Postives = 238/345 (68.99%), Query Frame = 1 Query: 49 IFYHFF*FSSLVHL*QFL*VTMC*ASEPDPGQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQG-QCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGGVLEGQGAGLWACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENEDCPGQGFG---G*NQWSDIPRYSWDLRQTEVGVKLD 1071 I F SSL H + ++PD G DS K+FLAAW AC SA TI VP GR+L+ N+VF G +CK I+IRI G++VAP D+ +I ++++WI FE V+ VSI GG+L+ QG LW CK + NCP+GA +L FS S+N+ I+GL S++SQ FHIVI+ N+V + GVKVSA +SPNTDGIHV++S V I +S+IGTGDDC+S+GPG+TN++I+ + CGPGHGISIGSLG+ ++E GV NVTV++V F GT NGVRIK+WG+ S+ FARNI+FQH M V NPIIIDQ YC ++ CP Q G ++ DI S TEV V LD Sbjct: 15 IILDFTLISSLAHPIPSTLNVLSYGAKPD-GSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTS----NTEVAVLLD 353
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 1.162e-67 Identity = 126/277 (45.49%), Postives = 173/277 (62.45%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWACKKSD-NSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCP 963 G D ++ + AW AC S +T+ +P G Y + V QG CK + I +IDG + APAD ++ W+ F + G++++G G L+GQG WA D N NC A LRF + ++ + S++S+MFHI + C D+ Q V V+A G S NTDGIHV S GVTI ++KI TGDDC+S+GPG+ N+ I V CGPGHGISIGSLG+ E V+ +TV TF+GT NGVR+K+W + G A ++ FQ MNNV NP+I+DQ+YCP Sbjct: 19 GAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKF-KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCP 294
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 8.066e-61 Identity = 119/277 (42.96%), Postives = 170/277 (61.37%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLW---ACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKY 957 G T++ K+FL W Q C S AT+ VP G +L V+F G CK+ +T+ + GT++A + W LFE V + + G G G+G +W C K N P T+L+F N NV ING++SV+++ FH+ + +V +Q +K++A +SPNTDGIH+ + V+ILDS I TGDDCVSVG G+ N+ +E V CGPGHG+S+GSLGK + E V + V + T T NG+RIK+WG + A +I F++ +M +V NPIIIDQ Y Sbjct: 63 GSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSK-VTVNVIGTIIATTSGYA---TPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPP--TSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNY 333
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.376e-60 Identity = 120/280 (42.86%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSI-NGGVLEGQGAGLWACKKSDNSNCPSGA-TTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENE 972 G+TD K FL AW +AC S +T+ +P G YLLS V +G CK I I + GT+ APAD + NW+ F V + GG+ +GQG+ + +N S +RF N +I + S DS++FHI + C ++ ++ +K+ A +SPNTDGIH+ S GV I+ S I TGDDC+S+G G N+ I+ + CGPGHGISIGSLGK Q E V+ + +++ T T T NG RIK+W G I F+ MNNV +PI+IDQ+YCP N+ Sbjct: 41 GKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDP-NWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNK 318
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.376e-60 Identity = 120/280 (42.86%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSI-NGGVLEGQGAGLWACKKSDNSNCPSGA-TTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENE 972 G+TD K FL AW +AC S +T+ +P G YLLS V +G CK I I + GT+ APAD + NW+ F V + GG+ +GQG+ + +N S +RF N +I + S DS++FHI + C ++ ++ +K+ A +SPNTDGIH+ S GV I+ S I TGDDC+S+G G N+ I+ + CGPGHGISIGSLGK Q E V+ + +++ T T T NG RIK+W G I F+ MNNV +PI+IDQ+YCP N+ Sbjct: 41 GKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEINVQGTIQAPADPSAFKDP-NWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNK 318
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 1.521e-59 Identity = 120/284 (42.25%), Postives = 177/284 (62.32%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGR-YLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGG---VLEGQGAGLW--ACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCPENE 972 G+TD ++F+ AW +AC S A + VP G YLL ++ G C N+ +T++I GTL A + WI+F+ V+ +S++GG V++G G W +CK++ C T L F NS ++++ L ++Q I I C++V+V V V+A DSPNTDGIH+ + + + +S IGTGDDC+S+ G+ N+ I ++ CGPGHGISIGSLG + +A V VTV +GT NGVRIK++ + SG A NI+FQ+ M+NV NPIIIDQ YC +++ Sbjct: 79 GKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPC-NSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSK 360
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 3.389e-59 Identity = 116/277 (41.88%), Postives = 167/277 (60.29%), Query Frame = 1 Query: 142 QTDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSINGG--VLEGQGAGLWACKK-SDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKYCP 963 +TD +F AAW +AC A +TI VP G Y++ ++ F+G CK +T+ ++G APA WI FE+++ ++NG + +GQG+ W + C S +RF+ N IN + S +S++FH+ I C ++ + + + A +S NTDGIH+ S+GV ++ +KI TGDDCVS+G G NL +ENV CGPGHGISIGSLG+ E V+ VTV T NGVRIK+W + G A NILF+ M+NV P++IDQ+YCP Sbjct: 82 KTDDSAAFAAAWKEAC--AAGSTITVPKGEYMVESLEFKGPCKG-PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCP 355
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 7.550e-59 Identity = 118/285 (41.40%), Postives = 177/285 (62.11%), Query Frame = 1 Query: 145 TDSVKSFLAAWAQACGSAEAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWACKKSDNSNCPSGATT-------LRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGF-ARNILFQHALMNNVDNPIIIDQKYCPENE 972 +D ++ +AW +AC S AA I +P G Y L+ + +G CK I +++DGT+ APAD VI E W F ++ ++++G GV +GQGA ++ KK+ ++ SG + F+ +N ++ G+ S DS+ FH+++ GC ++ G ++A GDSPNTDGIH+ S+ V IL++ IGTGDDCVS+G G+ + ++ V CGPGHG+S+GSLGK E V+ +TV + T T T NGVRIK+W +I F+ M NV NP+IIDQ+Y P N+ Sbjct: 36 SDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKA-PIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVY--KKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQ 317
BLAST of DY263273 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 4.894e-58 Identity = 120/275 (43.64%), Postives = 167/275 (60.73%), Query Frame = 1 Query: 139 GQTDSVKSFLAAWAQACGSAEAATIYVPPGR-YLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGVSING-GVLEGQGAGLWACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGCNDVKVQGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQKY 957 G TD ++FL AW C VP G ++L + FQG CK+ + +++ G LVAP+ + G+ + WILF + G+ I G G + GQG+ W K S T L+F + +N+ ++GL +DS M HI I+ CN V + ++++A SPNTDGI V ASS V I D I TGDDC+++ G +N+ I + CGPGHGISIGSLGK+ + A V+NV V + F GT NG RIK+W + SG+AR I F ++NV+NPIIIDQ Y Sbjct: 35 GVTDDSQAFLKAWEAVCSGTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGDGEINGQGSSWWEHKGSR-------PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTW-QGGSGYARMITFNGITLDNVENPIIIDQFY 301 The following BLAST results are available for this feature:
BLAST of DY263273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263273 ID=DY263273; Name=DY263273; organism=Citrus clementina; type=EST; length=1338bpback to top |