DY263280

Overview
NameDY263280
Unique NameDY263280
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1201
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263280 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.796e-24
Identity = 99/343 (28.86%), Postives = 146/343 (42.57%), Query Frame = 2 
Query:   86 QNRILLSPNSTFAAGFLPKPNSRNLFTFSVWYYNLSEPTT---TVIWSANDKLPVAGNGSLVIAATTGQLRXXXXXXXXXWPNPKTATGHPNSTRLFLQDAGNLVY----GN--WQSFNLPTDTILPNQTLNGPPLVCKNG----------KFSFLNASELVF--VSANHSYWKS--EHAFQQ------------LDYSGKLLQ---ANQDSLTASDLGETRLRRLTIDDDGNLRIYSYDDNGDRWTVVWQAVQEICTIPDLCGENAICISDGLSRSTSCVCPPGF--KNSTRQDKSCQRKI----ELKNLRNTKFLQLDYVNFSRGTLSDLETDNFSACKAI 982
            ++  L S + TF++GF       + FTFSVWY           T++WSAN   PV    S +     G +          W             R  L D GNLV     GN  WQSF+ PTDT LP Q +     +              +FS L+   L++     +  YW    ++ +Q             L  SG L     A+  +L ASD+G    RRLT+D DGNLR+YS +D+   W+V   A+ + C I  LCG N IC     S + +C CPPG+  +N     + C   +    +  + R+ +F++L   +F       L + +   C+ I
Sbjct:   44 ESSTLQSSDGTFSSGFYEVYT--HAFTFSVWYSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWR--ADGNNFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLITAATRLVPTTQSRSPGNYIFRFSDLSVLSLIYHVPQVSDIYWPDPDQNLYQDGRNQYNSTRLGMLTDSGVLASSDFADGQALVASDVGPGVKRRLTLDPDGNLRLYSMNDSDGSWSVSMVAMTQPCNIHGLCGPNGIC---HYSPTPTCSCPPGYATRNPGNWTEGCMAIVNTTCDRYDKRSMRFVRLPNTDFWGSDQQHLLSVSLRTCRDI 379
The following BLAST results are available for this feature:
BLAST of DY263280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KPRO_MAIZE1.796e-2428.86Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BC09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263280 ID=DY263280; Name=DY263280; organism=Citrus clementina; type=EST; length=1201bp
CTCACCATCACCATCCCTACAACAACAGCAAAAGCCTCAATACATGTCAT
CCTTCTCCTCATCAGACTCCCCGTGGCGTCCAAACCAAAATAGAATCCTC
CTCTCTCCCAACTCCACCTTCGCCGCCGGGTTTCTACCAAAACCAAATTC
TCGGAATCTCTTTACCTTCTCTGTTTGGTACTATAACTTGTCGGAACCCA
CCACCACCGTCATCTGGTCTGCTAATGACAAATTGCCTGTCGCCGGTAAC
GGTTCTTTAGTCATTGCCGCCACCACAGGCCAGCTCCGACTACTCAACTC
TTCCAACTCAAACTTGTGGCCAAATCCTAAAACAGCAACCGGCCATCCAA
ACTCTACCAGGCTCTTCCTTCAGGATGCTGGGAATCTCGTTTATGGAAAC
TGGCAGAGTTTTAATCTACCAACAGATACAATCTTGCCTAATCAGACCCT
AAATGGGCCCCCGCTGGTCTGCAAGAACGGCAAGTTCAGCTTCTTGAACG
CTTCAGAGCTGGTGTTTGTATCAGCTAATCACAGTTACTGGAAGAGTGAG
CACGCGTTTCAACAGCTTGACTATTCCGGGAAATTGCTTCAAGCAAACCA
AGATTCACTAACCGCATCAGATTTGGGTGAGACCCGGTTACGAAGATTGA
CAATTGATGATGACGGGAACCTGAGAATTTACAGCTACGATGATAATGGT
GATCGTTGGACAGTTGTTTGGCAAGCCGTGCAAGAAATATGCACAATTCC
AGACCTATGCGGTGAGAATGCTATCTGCATAAGCGATGGCTTAAGTCGTT
CGACATCGTGCGTTTGTCCACCGGGGTTCAAGAACAGCACCCGCCAGGAT
AAATCTTGTCAAAGAAAAATTGAGCTAAAAAATCTTAGAAACACCAAGTT
TCTCCAGCTTGATTATGTTAATTTCTCCAGAGGGACCTTGTCGGATCTAG
AAACTGACAATTTCTCTGCCTGCAAAGCAATTGCTCACCAACCCAAAATG
CGTCCCATTGGGATTCAGTACGACGGCAACGCTATTGGGTCTCCGTGACC
ACCTTCTGGACGGGTATGGGTCACTGGCAAGAAAAAGGGCACCTTTTTGC
CAATCAACCCGTCCAAAAAGGACGGTCAAACTTCCGGGGGTTGAACAATC
CTGTTGGCCCCCACCGGGTCCGGGAAAAAATGACCCCCCCTTTTCCCCCC
C
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