DY263282

Overview
NameDY263282
Unique NameDY263282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1213
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263282 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.347e-21
Identity = 77/236 (32.63%), Postives = 114/236 (48.31%), Query Frame = 1 
Query:  196 LPRFLSPREKSAGKAAMDPRKMRQKPRLERRNAAKHIEYDVAXXXXXXXXXXXXXXXXXXXXXXXXX--TSFRIEGVEGEFERICRSLGLSGPEDFAIPAAAWEARKNRSASDLLPRSRLKQLDTLKETVERQSDAAGAVVGELCDRVSDIVRIRNETEL-----TRTKLTQVAEL-----SCRASGAGNNDALAVMETTELPPSG-LAESSACCVSSNYVKGIKGVRPPLLKPAP 864
            + R L+  +KS G+   D + +    RLERR+AA++I YD A                           TSFRI G  GE +RI RSLG+SGP+D AI   AWEA K RS+SD++ R +   LD +++    +   +G VVG   D ++  V+ ++ +E        T+L+++  L        A G   N  +     T +   G L  ++   V      GIKG+RPP+LKP P
Sbjct:    1 MDRILARMKKSTGRRGGD-KNITPVRRLERRDAARNINYDAASCSSSSAEDLSVSTSSLMTRSLEFPEPTSFRIGGGVGEMDRIYRSLGVSGPDDLAISFDAWEACKKRSSSDVVNRFKSFDLDKVRDQDLSEEGPSGVVVGS--DSMNHKVQGQDLSEAGPSGGIVTELSEIGNLITPVDRLVADGVVENRRVMERTPTIVKSKGYLVPNNVVAVGVGVGGGIKGLRPPVLKPPP 233

HSP 2 Score: 30.4166 bits (67), Expect = 1.347e-21
Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = 3 
Query:  849 VKTRASMRQPVIDNACSTWDILRDFAPKNGI-TPSS 953
            +K   +M++P ID+  S+WD L  FAP   +  PSS
Sbjct:  229 LKPPPAMKRPPIDHRGSSWDFLTHFAPSETVKRPSS 264
The following BLAST results are available for this feature:
BLAST of DY263282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M3K1_ARATH1.347e-2132.63Mitogen-activated protein kinase kinase kinase 1 O... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BC11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263282 ID=DY263282; Name=DY263282; organism=Citrus clementina; type=EST; length=1213bp
CAACCATCACGAGTTTGGGACTATATGTTTACGTTTTCGCAGCCGCTGTC
GTATTTCTTCTTCTCATTCAGTTTTCTCGAGAAAGTTATCAAGAAAGATT
ATACGAGTCGTTTTGGACACCTGTGAAGGAAGGTTTTTAAGTTTCACCAC
AGTATGTTGTAAAATTTGGATGGATTCAGCTCTCAAATGCATCACTTACC
TCGATTTTTAAGTCCTAGGGAGAAATCCGCCGGCAAAGCGGCCATGGACC
CGAGGAAAATGAGGCAAAAACCTCGGCTCGAGCGGCGGAATGCGGCGAAG
CACATTGAGTATGATGTGGCCTCAACATCATCGTCACTTGATGATTCATC
GTCTTCATCTTCGCTAATTACTCGATCGCTTGACTTGTCCGACAGAACGA
GCTTCCGCATCGAAGGCGTGGAGGGAGAGTTCGAGCGGATTTGTCGGAGC
TTAGGCTTGTCTGGTCCCGAGGATTTCGCGATCCCGGCGGCGGCGTGGGA
GGCTCGAAAAAATCGTTCGGCTTCTGATCTCCTACCGAGGTCGAGGTTGA
AACAGCTGGATACTCTGAAAGAAACGGTGGAGAGACAGAGTGACGCAGCG
GGTGCGGTGGTCGGTGAGTTGTGCGATAGGGTTTCGGATATTGTCAGAAT
TAGGAACGAAACTGAGCTGACTCGGACCAAGTTGACTCAGGTAGCGGAAT
TGTCTTGTAGGGCTTCTGGTGCCGGTAACAATGATGCTCTTGCAGTTATG
GAGACTACTGAGTTGCCACCGAGCGGGTTGGCCGAGTCAAGTGCGTGCTG
TGTTAGTAGTAATTATGTGAAAGGAATTAAAGGAGTTCGGCCACCTCTGT
TAAAACCCGCGCCAGTATGAGGCAACCGGTTATTGATAACGCGTGTTCTA
CGTGGGATATCTTGAGAGATTTTGCACCTAAAAATGGTATAACGCCGTCT
TCAGTAATGAATGATAGAGCTCTAAGTAGTTCATCTGATGAAGAAAAAAA
TGAAAAGAAGGAGAAAAGGCTGACAGGGCGAATGGTAAGGAAGAAGAAGA
ATAAATGGGGTTATCAAATTCATGTTATTTTACAAAAAACCCAAAAAAGA
ATTCTTCAGGTCCCAAACTTGGAACCTTGGGTCAAATTTTTCCCCCCAGG
GGGAAGGTTTTAAAAAAAAATAACCCATATTTGGGACAAAAGGGGGGACT
TTTTGGGGGGACC
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