DY263284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: DDPS2_ARATH (Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.202e-43 Identity = 59/121 (48.76%), Postives = 92/121 (76.03%), Query Frame = 3 Query: 486 VRMLIIFLINF-YWLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELE 845 +++L +F + W++ ++E++FL LFE+S+K+E + +RIS+IGDSS+LP++L ++ + E+ TKNN+ QLIVAV YSGKYDV+QAC+ IA++VKD I +++IDE LIE+ELE Sbjct: 122 IQVLTVFAFSTDNWIRPRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELE 242 HSP 2 Score: 68.5514 bits (166), Expect = 2.202e-43 Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 845 TSCTDYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 T+CT++P+P+LLIRTSGELR SNFLLWQLAYT +F + L D G++ +L + FQQR+ Sbjct: 243 TNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQE-LWPDFGRSGFIEAL-MSFQQRQ 302
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: DDPS5_ARATH (Dehydrodolichyl diphosphate synthase 5 OS=Arabidopsis thaliana GN=At5g58784 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.343e-32 Identity = 48/107 (44.86%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + + EV+ LM LFEK + S++ S+ I+IS+IG+ ++LP +L L+ + E+ TK+ LI+A+ YSG+YD++QACKS+A KVKD +I+++DI+E +E+EL Sbjct: 128 WERPEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKEL 234 HSP 2 Score: 58.9214 bits (141), Expect = 2.343e-32 Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2 Query: 845 TSCTDYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 T C+++P P+LLIRTSGE R SNF LWQ AYT ++ T L D G+AE +L +QQR+ Sbjct: 236 TKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPT-VLWPDFGEAEYLEAL-TWYQQRQ 295
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: DDPS4_ARATH (Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana GN=At5g58782 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.003e-30 Identity = 43/108 (39.81%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELE 845 W + ++EV+ LM LF++ +KS+++ F S+ IR+S+IG+ +++P +L V + E+ TK+ LI+A+ YSG++D++ ACK+I +K + +IR +D+DE+L E+EL+ Sbjct: 115 WGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQ 222 HSP 2 Score: 57.3806 bits (137), Expect = 6.003e-30 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2 Query: 842 RTSCTDYPFPELLIRTSGELRSSNFLLWQLAYTRVF 949 +T CT++P P+LLIRTSGE R SNF LWQLAYT F Sbjct: 222 QTRCTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFF 257
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_ANAVT (Undecaprenyl pyrophosphate synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=uppS PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 7.840e-30 Identity = 43/110 (39.09%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPA 851 W + Q EVEFLM LF++ ++ EL + E ++I +G+ + LPR+LQ + + + TKNN + VA +Y G+ +++QAC++IAQKV+ +++ D+IDE + E+ L A Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTA 187 HSP 2 Score: 56.9954 bits (136), Expect = 7.840e-30 Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 869 PELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 P+LLIRTSGE+R SNFLLWQ+AY +++ TDTL D + E R+L +QQR+ Sbjct: 192 PDLLIRTSGEMRLSNFLLWQMAYGEIYI-TDTLWPDFDRTEFHRAL-CAYQQRE 243
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS1_ANASP (Undecaprenyl pyrophosphate synthetase 1 OS=Anabaena sp. (strain PCC 7120) GN=uppS1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.254e-29 Identity = 42/110 (38.18%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQELEPA 851 W + Q EVEFLM LF++ ++ EL + E ++I +G+ + LPR+LQ + + + TKNN + VA +Y G+ +++QAC++IAQKV+ +++ D+I+E + E+ L A Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRSMEETKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQPDEINEEVFERHLYTA 187 HSP 2 Score: 56.9954 bits (136), Expect = 2.254e-29 Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 2 Query: 869 PELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 P+LLIRTSGE+R SNFLLWQ+AY +++ TDTL D + E R+L +QQR+ Sbjct: 192 PDLLIRTSGEMRLSNFLLWQMAYGEIYI-TDTLWPDFDRTEFHRAL-CAYQQRE 243
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: DDPS3_ARATH (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana GN=At5g58780 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.954e-29 Identity = 42/107 (39.25%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + ++EV+ LM L + +KS+++ F E R+S+IG+ +++P +L V++ E+ T++ LI+A+ YSG+ D+++ACKSI +K + +IR +D+DE+LIE+EL Sbjct: 128 WGRHKIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIEREL 234 HSP 2 Score: 58.9214 bits (141), Expect = 4.954e-29 Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 845 TSCTDYPFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 T+CT++P P+LLIRTSGE R SNF LWQLAYT +F + L D K ++ +L + +Q+R+ Sbjct: 236 TNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFF-SPVLWPDFDKDKLLEAL-VSYQRRE 295
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: DDPS1_ARATH (Dehydrodolichyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=DPS PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.591e-27 Identity = 42/108 (38.89%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEK-SIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + ++E++ LM L + KS ++ F +R+S+IG+ +++P +L + + + E+ TK N LI+AV YSGK+D++ ACKS+ +K + +IR +D+DE+LIE+EL Sbjct: 128 WGRDKIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEATKGYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIEREL 235 HSP 2 Score: 56.225 bits (134), Expect = 2.591e-27 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 2 Query: 845 TSCTDYPFPELLIRTSGELRSSNFLLWQLAYTRVF 949 T+C+D+P P+L+IRTSGE R SNF LWQLAY+ +F Sbjct: 237 TNCSDFPSPDLMIRTSGEQRISNFFLWQLAYSELF 271
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_PROMP (Undecaprenyl pyrophosphate synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=uppS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.708e-27 Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL------EPAVLITHS 869 W++ EV+FL+ LFEK +K E+ E I+I IGD S LP +L+ L++ +E T NN F L + V+Y G+ ++V+A K IA K I+ DIDE L EL +P +LI S Sbjct: 81 WIRPSNEVDFLINLFEKVLKKEISEIHQESIKIKFIGDLSPLPNSLKLLIKSSEALTNNNKKFTLNICVNYGGRQEIVKAAKEIAIKSSSGKIKPSDIDEQLFNSELLTKGSMDPELLIRTS 202 HSP 2 Score: 52.373 bits (124), Expect = 9.708e-27 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 2 Query: 869 PELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQR 1027 PELLIRTSGE R SNFLLWQLAY+ +++ TD L D ++E +++ + +Q R Sbjct: 195 PELLIRTSGEKRISNFLLWQLAYSEIYV-TDVLWPDFTESEFLKAI-IDYQSR 245
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_THEEB (Undecaprenyl pyrophosphate synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=uppS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.016e-26 Identity = 43/107 (40.19%), Postives = 68/107 (63.55%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + EVEFLM LFE+ ++ EL ++EG++I +GD + LP++LQ + A T NN + +VA +Y G+ +++ AC+SIA +VK ++ DIDE L E+ L Sbjct: 80 WGRPLPEVEFLMTLFEQVLRRELGEMVAEGVQIHFVGDLTCLPKSLQAEIERAVAATANNQKIKFVVATNYGGRREIIHACRSIAAQVKAGLLDPADIDEVLFERHL 186 HSP 2 Score: 51.2174 bits (121), Expect = 8.016e-26 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 2 Query: 863 PFPELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQRK 1030 P P+LLIRTSGELR SNF LWQ+AY +++ T TL D ++ +L +QQR+ Sbjct: 192 PDPDLLIRTSGELRISNFFLWQVAYAEIYV-TKTLWPDFDRSAFHEAL-RDYQQRQ 245
BLAST of DY263284 vs. ExPASy Swiss-Prot
Match: UPPS_SYNY3 (Undecaprenyl pyrophosphate synthetase OS=Synechocystis sp. (strain PCC 6803) GN=uppS PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.119e-24 Identity = 39/107 (36.45%), Postives = 71/107 (66.36%), Query Frame = 3 Query: 522 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIRLDDIDESLIEQEL 842 W + EVEFLM LFE+ ++ EL+ ++E +RI +G+ + LPR+LQ+ + + + TKNN+ + VA +Y G+ ++V C++IA++V+ + + IDE ++E+ L Sbjct: 78 WGRPLEEVEFLMTLFERVLRRELKEMMAENVRIRFVGNLTSLPRSLQDEIARSMEDTKNNTGIRFTVATNYGGRQEIVHVCQAIAREVQSGKLDPETIDEGVVEKYL 184 HSP 2 Score: 50.0618 bits (118), Expect = 1.119e-24 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 2 Query: 869 PELLIRTSGELRSSNFLLWQLAYTRVFLRTDTLGLDLGKAEVGRSL*LHFQQR 1027 P+LLIRTSGELR SNFLLWQ+AY +++ T TL D + +L +QQR Sbjct: 192 PDLLIRTSGELRISNFLLWQMAYAEIYV-TSTLWPDFDRQAFHLAL-RDYQQR 242 The following BLAST results are available for this feature:
BLAST of DY263284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263284 ID=DY263284; Name=DY263284; organism=Citrus clementina; type=EST; length=1116bpback to top |