DY263285

Overview
NameDY263285
Unique NameDY263285
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.791e-28
Identity = 66/126 (52.38%), Postives = 95/126 (75.40%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMGKY 378
            L  RV IVTG+SRGIGREIA+++A+ GAK+VI+Y+SN   A+ VA+ IN+ +  +    RAI  KADV++P+QV  LFD+AE AF  P+H++VN+AG+ D KYPT+A TS +++DRIF+ +  G +
Sbjct:   19 LGGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINNKSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAF-GPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAF 143          
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.127e-14
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMGKYD 381
            L D+  IVTG+SRGIGR IA+ LA+ GA +V+NY+ N A+A+ V  EI S         +AI VKADVS+P  V+++       F S + +LVN+AG+   +   I     D++D +   ++ G ++
Sbjct:    2 LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGR------KAIAVKADVSNPEDVQNMIKETLSVF-STIDILVNNAGI--TRDNLIMRMKEDEWDDVININLKGVFN 119          
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 7.307e-14
Identity = 46/126 (36.51%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMGKY 378
            L  +V +VTG+ RGIG  IA+ L Q GAK+V+NY ++   A+ V  EI S+ S       AI+++ADV DP  V  L D A + F   + ++ ++AG++   +  + + + D+FDR+FR +  G++
Sbjct:    9 LDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSD------AISIQADVGDPDAVTKLMDQAVEHF-GYLDIVSSNAGIV--SFGHVKDVTPDEFDRVFRVNTRGQF 125          
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 5.236e-12
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMG 372
            L+ +V +VTG+S+GIG  IA  LA+ GA +V+NY S+ A AD V   I ++        +AI V+ADVS   Q + L ++A Q F   + VLVN++G+ +  +  I   + + + RIF  +++G
Sbjct:    4 LEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGG------KAIAVQADVSQAVQARGLVEAAVQQF-GRLDVLVNNSGVYE--FAAIEEVTEEHYRRIFDVNVLG 118          
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.167e-11
Identity = 39/126 (30.95%), Postives = 77/126 (61.11%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMGKY 378
            L  +V +VTG+ RGIGRE+A+ L + GAK+++NY +++  A+ V   I  S S A       ++KA+VSD  Q+  +F  A+Q +   + ++ +++G++   +  + + + ++FDR+F  +  G++
Sbjct:   27 LMGKVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKSGSDAA------SIKANVSDVDQIVKMFGEAKQIW-GRLDIVCSNSGVV--SFGHVKDVTPEEFDRVFAINTRGQF 143          
BLAST of DY263285 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 1
Query:    1 LKDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFR*SMMGKY 378
            LKD+VV+VTG S+G+GR +A+   Q  +K+V+NY SN  +A  V  EI  +        +AI V+ DV+    V +L ++A + F S + V++N+AG+ +P  P+    SL++++++   ++ G +
Sbjct:    5 LKDKVVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGG------QAIIVRGDVTKEEDVVNLVETAVKEFGS-LDVMINNAGVENP-VPS-HELSLENWNQVIDTNLTGAF 121          
The following BLAST results are available for this feature:
BLAST of DY263285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
SDR1_PICAB1.791e-2852.38Short-chain type dehydrogenase/reductase OS=Picea ... [more]
FABG_BACSU1.127e-1438.583-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
STCU_EMENI7.307e-1436.51Versicolorin reductase OS=Emericella nidulans GN=s... [more]
Y182_METEA5.236e-1237.10Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
THR1_GLOLA1.167e-1130.95Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
DHG2_BACME5.790e-1134.13Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263285 ID=DY263285; Name=DY263285; organism=Citrus clementina; type=EST; length=1328bp
CTCAAAGATCGAGTTGTAATAGTGACCGGCTCATCTCGGGGAATCGGCCG
AGAAATCGCGATTCACCTTGCCCAACTCGGAGCCAAACTCGTCATCAACT
ACACCTCCAACTCGGCTCAAGCCGACGTCGTAGCCGCCGAGATTAACTCG
TCGGCTTCCCCTGCCACATATCCGCCACGAGCCATTACTGTCAAAGCCGA
CGTTTCGGATCCGGCCCAGGTCAAGTCTCTCTTTGACTCCGCTGAGCAGG
CTTTTGACTCGCCGGTTCATGTCCTGGTTAACTCCGCTGGGTTGCTTGAT
CCGAAGTACCCCACTATTGCAAACACTTCCTTGGATGACTTTGATCGTAT
TTTCAGGTAATCTATGATGGGAAAATATGATTTTTATTTTTTGGATTATG
AAAAAAATGAAATATTGATGTAAAAAATTATTTATGTACATTTTAAAAGG
ACTCAAACAAATGTTGGCTTCACTAATTTTTATTCAACTGTAAATGGTAG
GTCTGATGTATTCCTATGGACATGTTAAAAATTAAGGAAAAAATGAATTT
TTTCATTTTTTTTTGGTTGCTACGAAGCAGTAACTTGAAGGGGGGAAAAG
TAGTACTGGGTATGCTTGGGTTTGAGATGTGTGTTTTTAAGTCGGTTGTA
GATTGTAAACTTTAGTTGTGAAGTAAAAGCTAGCGTTTATGAGCACTTTA
ATTTTAGTTCTTGTAGTTTCAAAATCAAGCCTACAAACATATCCATAGTG
GTTGGTTTGTTTATGAATTGTTTTGGTAAATATAGTATTTATTTATTAGT
AAAAATAAGATGAAAAAGTTACAAAAACATGTTTGCCTGTAGTTAAGGTA
CTTTGTGTCTCTGTTTGCGCTTTTGCATATTTGTATAAAGAGTGAATGAT
TTGCATTCTAGGAACAGAGCGCTAGAGAACATTGTGATTGAACATTGAAG
CTGCTAAACCACTAGTAATACTTTCATTATGAAGCAAATTCATAATGGTT
ACTTTCAAGCTATCAACTGTCCCGGTCAATCCGGGATATTTATTTTGGAG
GGGTCAGGGCAGGGGGGGCGTTTTTTAGGTGGCAAAAAGGCAGCAAAAAA
GGGTAAAAACCCGGGGGGGGGGGGGGAGGAAATATTTCGAAAATTAACAA
TCCCTGGGGGGGGGGGCTTTTAAAACCCGGGGTATGCCCCGGTAACCCCC
GACACCCAGGGGGGGGGGGGGGGGGAAAAAAAGGGGGGAAAAAAATAATA
AACAAAAGGAGGAGAACCCTAGGGGGGGAACCAGGCAAAAAAAAAAAACC
CCCAAAATATTTTGTGTGTGTTTCCTCC
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