DY263295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 5.225e-53 Identity = 135/336 (40.18%), Postives = 173/336 (51.49%), Query Frame = 1 Query: 139 WARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG-------RTGATP------XXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGN-QYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 WA+ CDTCR+AACTVYC+AD AYLCS+CD++VH ANR+A RHERV VC+SCE+APAAF EIHSANPLARRHQRVPILPIS Y T T AASWLL + DE+L+LVDY+ + Q+ DQ N Q V Q+ Y D VVP+Q E+ +K ++ QQNFQ+ ++ S A S NG DLGVVPEST SD ++S+ R PK + Q + + + +EKK+ +K + + R+ E +PR KGR KK Sbjct: 8 WAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG---------DEFLNLVDYSSSDKQFTDQ---SNQYQLDCNVPQRSYGEDGVVPLQIEV-SKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKA--VTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.986e-52 Identity = 136/343 (39.65%), Postives = 173/343 (50.44%), Query Frame = 1 Query: 94 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGG--NQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYD-SSKAGYSYNGXXXXXXXXXXT--DLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYS-HGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 M+KEE WAR CDTCR+AACTVYC+AD AYLC+ CD+RVH ANRVA RHERV VC+SCE APAAF EIHSANPLARRHQRVPILP+S + A ASWLL + EYLDLVDY+ NQ+ D NQ H Q+ + GD VVP+Q E + + QQNFQ+G++Y SS A Y+ N + D+ VVPEST SDI++ H R K T+ + + + + +EKK+ +K + + R+ E +PR KGR K+ Sbjct: 1 MLKEESNESGT----WARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSM--APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGV--------EYLDLVDYSSSMDNQFED-------NQYTH--YQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.891e-51 Identity = 131/359 (36.49%), Postives = 166/359 (46.24%), Query Frame = 1 Query: 94 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTG-----------------ATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQY--LDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQD---SHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 M+K+E AR CDTCR+ ACTVYC AD AYLC +CD++VH ANRVA RH+RV VCESCE+APAAF E+HSANPLARRHQRVPILPISG+ + T ASWL + DEYL+LVDY Y +YS +QQ V Q Y GD VVP++ E + +QQNFQ + Y SS Y+ NG + GVVPEST + SH R PKGT+ D T + + +EK++ +K + + R+ E +PR GR K+ Sbjct: 1 MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--------DEYLNLVDYNSSMDYKFTGEYS---QHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQFNIKYGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 8.975e-29 Identity = 101/346 (29.19%), Postives = 153/346 (44.22%), Query Frame = 1 Query: 142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYG-GRTGATP------------XXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYL----DQYSN---GNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXT---DLGVVPE-STMSDISISHSRPPKGTLTSSQD-SHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 +++CD+C++A +YC+ D A+LC +CDS+VH AN++A RH RV++CE CEQAPA +IHSANPLARRH+RVP+ P SV G T AASWLLL D + G QYL D Y + GN + + + Q D VVPV+ + ++ F+M D+ G++Y G + ++GVVP+ +++D+S P G TS D + P S + + +EK++++K + + R+ E +PR KGR K+ Sbjct: 3 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDS----PEMNTGQQYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTV-RIPTVNENCFEM--DFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSY----PYGGPATSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 337
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.411e-28 Identity = 90/322 (27.95%), Postives = 140/322 (43.48%), Query Frame = 1 Query: 142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCEL-ANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 +R+CD+C++ A T++C+AD A+LC CD ++H AN++A RHERV++CE CEQAPA +IHSANPL+RRH+RVPI P +V G A+ ASWLL E+ +DY ++ S+GN D VVPVQ +L N+D+ D +SK D+ +VPES ++++ P L+ ++ + + +EK++++K + + R+ E +PR KGR K+ Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV-GPAKSASSSVNFVDEDGGDVTASWLLAK------------------EGIEITNLFSDLDYPKIEVTSEENSSGN---------------DGVVPVQNKLFLNEDY--------FNFDLSASKISQQGFNFINQTVSTRTIDVPLVPESGGVTAEMTNTETPAVQLSPAE-------------REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 271
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 5.635e-23 Identity = 94/342 (27.49%), Postives = 144/342 (42.11%), Query Frame = 1 Query: 142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPI------------SGSVYG--GRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCE-----LANKDHHRHQQNFQMGLDYDSSK-AGYSYNGXXXXXXXXXXT-DLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104 AR CD C++ V+C+ D A+LC ACD+R+H RHERV+VCE CEQAPAA +IHSANPLA RH+RVP+ + S +G G + WLL + ++ L+D+ N + N++Q G GDS+VPVQ + L N DH +D+ SK + ++Y + + GVVP+ ++ S++ S T+TSS A S + + +EK++++K + + R+ E++PR KGR K+ Sbjct: 19 ARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNSF-------NHHQNNAG-------GDSLVPVQTKTEPLPLTNNDH-------CFDIDFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNTNN-SVNRS-----TITSSTTGGDH--QASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKR 327
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.462e-11 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 145 RVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISG 423 R+CD C ++ VYCKAD A LC ACD +VHVAN++ +H R +C+SC ++P++ + H+A+ + H R P +G Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTG 101 The following BLAST results are available for this feature:
BLAST of DY263295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263295 ID=DY263295; Name=DY263295; organism=Citrus clementina; type=EST; length=1180bpback to top |