DY263295

Overview
NameDY263295
Unique NameDY263295
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1180
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 5.225e-53
Identity = 135/336 (40.18%), Postives = 173/336 (51.49%), Query Frame = 1
Query:  139 WARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG-------RTGATP------XXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGN-QYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            WA+ CDTCR+AACTVYC+AD AYLCS+CD++VH ANR+A RHERV VC+SCE+APAAF               EIHSANPLARRHQRVPILPIS   Y          T  T                   AASWLL +                       DE+L+LVDY+  + Q+ DQ    N  Q    V Q+ Y  D VVP+Q E+ +K  ++ QQNFQ+ ++  S  A  S NG           DLGVVPEST SD ++S+ R PK    + Q  +          +  +    +EKK+ +K  +  +   R+   E +PR KGR  KK
Sbjct:    8 WAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG---------DEFLNLVDYSSSDKQFTDQ---SNQYQLDCNVPQRSYGEDGVVPLQIEV-SKGMYQEQQNFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKA--VTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.986e-52
Identity = 136/343 (39.65%), Postives = 173/343 (50.44%), Query Frame = 1
Query:   94 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGG--NQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYD-SSKAGYSYNGXXXXXXXXXXT--DLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYS-HGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            M+KEE          WAR CDTCR+AACTVYC+AD AYLC+ CD+RVH ANRVA RHERV VC+SCE APAAF               EIHSANPLARRHQRVPILP+S +       A               ASWLL +                        EYLDLVDY+    NQ+ D       NQ  H   Q+ + GD VVP+Q E +     + QQNFQ+G++Y  SS A Y+ N           +  D+ VVPEST SDI++ H R  K T+        +     +   +  +    +EKK+ +K  +  +   R+   E +PR KGR  K+
Sbjct:    1 MLKEESNESGT----WARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSM--APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGV--------EYLDLVDYSSSMDNQFED-------NQYTH--YQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.891e-51
Identity = 131/359 (36.49%), Postives = 166/359 (46.24%), Query Frame = 1
Query:   94 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTG-----------------ATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQY--LDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQD---SHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            M+K+E           AR CDTCR+ ACTVYC AD AYLC +CD++VH ANRVA RH+RV VCESCE+APAAF               E+HSANPLARRHQRVPILPISG+ +   T                                  ASWL  +                       DEYL+LVDY     Y    +YS    +QQ   V Q  Y GD VVP++ E +      +QQNFQ  + Y SS   Y+ NG           + GVVPEST    + SH R PKGT+    D        T      +  +    +EK++ +K  +  +   R+   E +PR  GR  K+
Sbjct:    1 MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--------DEYLNLVDYNSSMDYKFTGEYS---QHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQFNIKYGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 8.975e-29
Identity = 101/346 (29.19%), Postives = 153/346 (44.22%), Query Frame = 1
Query:  142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYG-GRTGATP------------XXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYL----DQYSN---GNNNQQQHGVAQKGYVGDSVVPVQCELANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXT---DLGVVPE-STMSDISISHSRPPKGTLTSSQD-SHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            +++CD+C++A   +YC+ D A+LC +CDS+VH AN++A RH RV++CE CEQAPA                 +IHSANPLARRH+RVP+ P   SV   G    T                         AASWLLL                        D      +   G QYL    D Y +   GN + +   + Q     D VVPV+     +    ++  F+M  D+     G++Y G          +   ++GVVP+  +++D+S     P  G  TS  D    +  P  S  +  +    +EK++++K  +  +   R+   E +PR KGR  K+
Sbjct:    3 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDS----PEMNTGQQYLFSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTV-RIPTVNENCFEM--DFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSY----PYGGPATSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 337          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.411e-28
Identity = 90/322 (27.95%), Postives = 140/322 (43.48%), Query Frame = 1
Query:  142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCEL-ANKDHHRHQQNFQMGLDYDSSKAGYSYNGXXXXXXXXXXTDLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            +R+CD+C++ A T++C+AD A+LC  CD ++H AN++A RHERV++CE CEQAPA                 +IHSANPL+RRH+RVPI P   +V G    A+              ASWLL                       E+      +DY       ++ S+GN               D VVPVQ +L  N+D+           D  +SK                  D+ +VPES      ++++  P   L+ ++             +  +    +EK++++K  +  +   R+   E +PR KGR  K+
Sbjct:    5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV-GPAKSASSSVNFVDEDGGDVTASWLLAK------------------EGIEITNLFSDLDYPKIEVTSEENSSGN---------------DGVVPVQNKLFLNEDY--------FNFDLSASKISQQGFNFINQTVSTRTIDVPLVPESGGVTAEMTNTETPAVQLSPAE-------------REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 271          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 5.635e-23
Identity = 94/342 (27.49%), Postives = 144/342 (42.11%), Query Frame = 1
Query:  142 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPI------------SGSVYG--GRTGATPXXXXXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSNGNNNQQQHGVAQKGYVGDSVVPVQCE-----LANKDHHRHQQNFQMGLDYDSSK-AGYSYNGXXXXXXXXXXT-DLGVVPESTMSDISISHSRPPKGTLTSSQDSHFKCTPAYSHGQGGQSPEKQEKKEDKKIPRDNQVCPREGLCETKPRYKGRVPKK 1104
            AR CD C++    V+C+ D A+LC ACD+R+H       RHERV+VCE CEQAPAA                +IHSANPLA RH+RVP+               + S +G  G +                   WLL +                        ++  L+D+   N +       N++Q   G       GDS+VPVQ +     L N DH          +D+  SK + ++Y            + + GVVP+   ++ S++ S     T+TSS         A S  +  +    +EK++++K  +  +   R+   E++PR KGR  K+
Sbjct:   19 ARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGSSTTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFPNSF-------NHHQNNAG-------GDSLVPVQTKTEPLPLTNNDH-------CFDIDFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNTNN-SVNRS-----TITSSTTGGDH--QASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKR 327          
BLAST of DY263295 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.462e-11
Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  145 RVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISG 423
            R+CD C ++   VYCKAD A LC ACD +VHVAN++  +H R  +C+SC ++P++                + H+A+  +  H R P    +G
Sbjct:   11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTG 101          
The following BLAST results are available for this feature:
BLAST of DY263295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
COL1_ARATH5.225e-5340.18Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
COL2_ARATH1.986e-5239.65Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
CONS_ARATH4.891e-5136.49Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
COL4_ARATH8.975e-2929.19Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
COL3_ARATH3.411e-2827.95Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL5_ARATH5.635e-2327.49Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL13_ARATH6.462e-1135.48Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BD12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263295 ID=DY263295; Name=DY263295; organism=Citrus clementina; type=EST; length=1180bp
CTGATTACAAAACGTCGGCGTTTAGAGTGTGAGAGAAAATTTAAAGAATT
AAAAAAAAAAGGGAGAGAAACAAGAAAACCAACTAATTAAACGATGATGA
AAGAGGAGAGCAACGACGGCAGTGGAGGAGGAAACAGCTGGGCACGTGTG
TGTGACACTTGCAGGGCAGCTGCATGCACGGTCTACTGCAAAGCTGATAT
GGCGTATCTTTGCTCTGCATGCGACTCCAGAGTCCATGTGGCCAATCGTG
TCGCCTTTAGACATGAGCGCGTGTTCGTGTGCGAGTCCTGCGAACAAGCC
CCGGCTGCTTTCTTATGCAAGGCGGACGCGGCGTCGCTTTGTGCTGCATG
TGACGCTGAGATTCACTCAGCAAACCCTCTCGCAAGGCGCCACCAGCGGG
TCCCTATTCTTCCGATATCTGGCTCGGTGTACGGGGGAAGGACCGGCGCG
ACGCCGGAGGGAGATCATGAGGATGACCAGGACGAGGAAGAAGCGGCTTC
GTGGTTGCTGTTGAGTAATCCTGGGAAGAATTGCGGTAATGGTAATAATG
GGAATAATAATGGGTTTCTGTTTGGTGGGGAAGTTGATGAGTACTTGGAC
CTTGTGGATTATACTGGTGGGAATCAGTACCTTGATCAGTACAGTAATGG
TAACAATAATCAGCAACAGCACGGTGTTGCTCAAAAGGGTTATGTGGGTG
ACAGTGTTGTGCCTGTTCAGTGTGAATTAGCTAACAAAGATCATCATCGT
CATCAGCAAAATTTTCAAATGGGATTGGACTATGATTCATCTAAAGCAGG
ATATAGCTACAACGGTTCAATTAGTCACAGTGTCTCGGTTTCATCTACCG
ATCTCGGAGTGGTACCGGAATCAACCATGAGTGACATATCGATTTCACAC
TCGAGGCCACCGAAAGGGACATTGACCTCTTCTCAGGACTCCCATTTCAA
ATGCACCCCAGCTTACTCCCATGGACAGGGAGGCCAGAGTCCTGAAAAAC
AGGAAAAAAAAGAAGACAAAAAAATTCCAAGAGACAATCAGGTATGCCCC
AGGGAAGGCTTATGCGAAACTAAACCACGTTACAAGGGCAGGGTTCCCAA
AAAAAACGGAGGCTGAAATTTGAAAGTTGATTCAATGGTTCCCCCCCACA
TTTGAAGAAGGAATCCCGGGAATATGGAAT
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