DY263301

Overview
NameDY263301
Unique NameDY263301
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1356
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263301 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.062e-41
Identity = 104/241 (43.15%), Postives = 130/241 (53.94%), Query Frame = 3
Query:  159 NDDARFTSSPLKIXXXXXXXXXXXXAET----------LTESKNSLSHQIHSLRTRSDESTQSTELTQPESLTRKLQLFAERAYGNSARVCSMYPSTTGAG---------ETLVNL--PLLCSAWMSLSQSTTSESAALPEVSSTXXXXXXXXXPHSVSRSDEERVLISEVLVRNKDGEELERKYLGTEALTVLKACHANSALTVREVQEDVNRIIDGGYFCSCMPIA--TRDGIRLIFQL 812
            NDD RF+SS ++I                         L+ ++NSL+  + SL+ R     +S    +P   T+ L    +   G S+ +      +T            ET+  L  PLLC A  SLS +  +ES    E   T          HSVSR+ EERVLISEVLVR KDGEELERK L  EAL  LKAC ANSALT+REVQEDV+RII+ GYFCSC P+A  TRDGIRL+FQ+
Sbjct:    5 NDDVRFSSSSIRIHSPSPKEQHSLLTNLQSCSKTFVSHLSNTRNSLNQMLQSLKNRHTPPPRSVR--RPNLPTQMLNSVTQLMIGKSSPISLSLIQSTQFNWSESRDENVETIRGLSSPLLCCA--SLSLTRPNESTQSVEGKDTVQQQKG----HSVSRNAEERVLISEVLVRTKDGEELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCSCTPVAVDTRDGIRLMFQV 237          

HSP 2 Score: 43.5134 bits (101), Expect = 1.062e-41
Identity = 25/55 (45.45%), Postives = 31/55 (56.36%), Query Frame = 2
Query:  944 KSFTGMECEGANVLSSKFLEHAFRNNYAGAGKLSI*GGWEEVKTSIKGWEYGAGV 1108
            + F G+ CE ANVL SKF+  AFR+   G GK+      EE  TSI GW    G+
Sbjct:  241 QEFRGLVCENANVLPSKFIHEAFRD---GFGKVINIKRLEEAITSINGWYMERGL 292          

HSP 3 Score: 22.7126 bits (47), Expect = 1.062e-41
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  919 LWHKVEPNQEFHG 957
            L  +VEPNQEF G
Sbjct:  233 LMFQVEPNQEFRG 245          
BLAST of DY263301 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.240e-27
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  582 EERVLISEVLVRNKDGEELERKYLGTEALTVLKACHANSALTVREVQEDVNRIIDGGYFCSCMPIA--TRDGIRLIFQL 812
            EERVLISEV VR KDGE LER  L   A   L+AC  N+ALTVREVQEDV+R+++ G F SCMP+A  TRDGIRL+F++
Sbjct:   91 EERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQEDVHRVVESGLFRSCMPVAVDTRDGIRLVFEV 169          

HSP 2 Score: 40.817 bits (94), Expect = 2.240e-27
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 2
Query:  944 KSFTGMECEGANVLSSKFLEHAFRNNYAGAGKLSI*GGWEEVKTSIKGWEYGAGV 1108
            + F G+ CEGAN+L SKFLE AF + +   GK+      ++V  S+ GW    G+
Sbjct:  173 QDFHGLVCEGANMLPSKFLEDAFHDRH---GKIINIRHLDQVIKSVNGWYQERGL 224          

HSP 3 Score: 23.8682 bits (50), Expect = 2.240e-27
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  928 KVEPNQEFHG 957
            +VEPNQ+FHG
Sbjct:  168 EVEPNQDFHG 177          
BLAST of DY263301 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.240e-27
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 3
Query:  582 EERVLISEVLVRNKDGEELERKYLGTEALTVLKACHANSALTVREVQEDVNRIIDGGYFCSCMPIA--TRDGIRLIFQL 812
            EERVLISEV VR KDGE LER  L   A   L+AC  N+ALTVREVQEDV+R+++ G F SCMP+A  TRDGIRL+F++
Sbjct:   91 EERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQEDVHRVVESGLFRSCMPVAVDTRDGIRLVFEV 169          

HSP 2 Score: 40.817 bits (94), Expect = 2.240e-27
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 2
Query:  944 KSFTGMECEGANVLSSKFLEHAFRNNYAGAGKLSI*GGWEEVKTSIKGWEYGAGV 1108
            + F G+ CEGAN+L SKFLE AF + +   GK+      ++V  S+ GW    G+
Sbjct:  173 QDFHGLVCEGANMLPSKFLEDAFHDRH---GKIINIRHLDQVIKSVNGWYQERGL 224          

HSP 3 Score: 23.8682 bits (50), Expect = 2.240e-27
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  928 KVEPNQEFHG 957
            +VEPNQ+FHG
Sbjct:  168 EVEPNQDFHG 177          
The following BLAST results are available for this feature:
BLAST of DY263301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH1.062e-4143.15Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSJ2.240e-2764.56Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSI2.240e-2764.56Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BE06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263301 ID=DY263301; Name=DY263301; organism=Citrus clementina; type=EST; length=1356bp
TCACTCTCCTCTACGGGTTTATCTGCTGTTGCTTCTTCTTCTCCAATGCG
TTCCACTAAATTCAGCTTCAGTTCATCATTCAATTAACCGAAATTTCAAT
CCTTTTTTGCTTTTAATTTTGCAACAGAGGCAGCCCGATTCTGACAATGG
CTCAGAAAAACGACGACGCTCGGTTCACATCATCTCCTCTCAAAATCCCT
CGCTTTCAACCTCAGCCTCCTCTCCCTTTCTTCGCCGAAACATTAACGGA
ATCCAAAAACTCTCTCTCTCATCAAATTCACTCACTCAGAACTCGCTCTG
ATGAGTCCACTCAGTCAACTGAGTTAACTCAGCCGGAGTCACTCACTCGG
AAGCTCCAATTATTTGCTGAACGCGCGTACGGAAACTCGGCTCGCGTCTG
TTCAATGTACCCGTCAACAACTGGCGCCGGCGAGACGTTAGTGAATTTAC
CACTTCTATGCTCGGCGTGGATGTCCCTGAGTCAGTCGACGACGTCCGAG
TCGGCAGCTTTGCCCGAGGTGTCGTCGACTCAGCTGCAACAGAAAGCGCA
GCAGCAGCCGCACTCGGTGAGCCGAAGCGACGAAGAGCGGGTGTTGATAA
GTGAAGTTTTGGTGAGAAATAAAGACGGTGAAGAACTTGAGAGAAAATAC
CTCGGAACAGAGGCGTTAACTGTGTTAAAAGCTTGCCATGCCAACTCAGC
ATTGACTGTTCGCGAGGTCCAAGAGGACGTTAACAGGATCATCGATGGCG
GTTACTTCTGCTCGTGTATGCCCATCGCAACGCGTGATGGCATCAGATTG
ATATTTCAGCTATATTTAAAATAATCTTTTAAGAAAAAATTAATTAACTT
TTCTGTAAAATATGCCTTAGACATTATGTTGTATTTAATTTCTTTGATGA
ATACTTTTTGTGGGTTTCTTGTGGCACAAGGTAGAGCCAAATCAAGAGTT
TCACGGGGATGGAATGTGAAGGAGCAAATGTTCTTTCCTCCAAGTTTCTA
GAGCATGCTTTTCGCAATAATTATGCTGGTGCAGGAAAATTATCAATATA
GGGCGGTTGGGAAGAGGTGAAAACCTCAATCAAAGGCTGGGAATATGGAG
CAGGGGTCAATTTGGCTTGGGTTTTCGGGGGTGAAAATTCTTTCTGGGGG
GAAATATTAAAATTAAAAATTTGGAAAAAACGGAAGGTCAAAAAAAATTT
CCCCTTCCGTTTCTCTTTAGAAGGGAAAAAAAGGGGGGGAGCCCCAACAA
GAGGGGGAAAAAAAAAGGGCCGGGAAAAAATATTTTTATAAAAAAACATT
TTAATTAACAAAAGAGGGGGGAGAGGGCGCCTACCCACGCCGGGGGTCTC
CCTCTG
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