DY263303

Overview
NameDY263303
Unique NameDY263303
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MANA_DICDI (Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.512e-17
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  619 LADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQIQSPL 948
            + + + IAQHHDAVSGTE+QHVA DYA R+SIG   + + + + +  L  +  +     A      CPLLN S CP ++ +S  G S+ V+IYN L W R E V+I  P+
Sbjct:  410 MREVMGIAQHHDAVSGTEQQHVADDYAERLSIGNCASLETINTVVGTLLTANGNSKSAAATPTISFCPLLNQSICPATDPLS-SGTSVPVLIYNSLSWTRNEPVRIPIPI 518          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_FELCA (Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.293e-15
Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQI 936
            +   QLE L G +++ GP    ++  L  A+A+ QHHDAVSGT +QHVA DYA +++ G+   E L++++LA L+ S+          +F  C  LN+S CP S+      K+  V IYNPLG K + +V++
Sbjct:  412 QVCNQLEALAGPAANVGPYGSGDSAPLNQAMAVLQHHDAVSGTSKQHVADDYARQLAAGWDPCEVLLSNALARLSGSKE---------DFTYCRNLNVSVCPLSQT----AKNFQVTIYNPLGRKIDWMVRL 530          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_BOVIN (Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.631e-14
Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQI 936
            +   QLE L G +++ GP    ++  L +A+A+ QHHDAVSGT RQHVA DYA ++S G+   E L++++LA L+  +          +F  C  LNIS CP ++      +   V++YNPLG K + +V++
Sbjct:  412 QVCNQLEALAGPAANVGPYGSGDSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLKE---------DFAFCRKLNISICPLTQT----AERFQVIVYNPLGRKVDWMVRL 530          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_MOUSE (Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 8.096e-14
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQI 936
            +   QLE L G  ++ GP    ++  L +A+A+ QHHDAVSGT RQ+V  DYA +++ G+   E LV+++LA L+  +          NF  C  LNIS CP    VS   +   V +YNPLG K +++V++
Sbjct:  410 QVCNQLEALVGPEANVGPYGSGDSAPLQEAMAVLQHHDAVSGTARQNVVNDYARQLAAGWGPCEVLVSNALARLSHYKQ---------NFSFCRELNISICP----VSQTSERFQVTLYNPLGRKVDQMVRL 528          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_HUMAN (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 8.096e-14
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQI 936
            +   QLE L G +++ GP    ++  L +A+A+ QHHDAVSGT RQHVA DYA +++ G+   E L++++LA L   +          +F  C  LNIS CP S+  +       V++YNPLG K   +V++
Sbjct:  410 QVCNQLEALVGLAANVGPYGSGDSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLAAGWGPCEVLLSNALARLRGFKD---------HFTFCQQLNISICPLSQTAA----RFQVIVYNPLGRKVNWMVRL 528          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_CAVPO (Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.096e-14
Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQIQSPLKRLLLRI 969
            +   QLE   G +++ GP    +++ L  A+A+ QHHDAVSGT +QHVA DYA +++ G+   E L++++LA L+ S+ +         F  C  LNIS CP S+      +   V++YNPLG K + +V++  P+++ L  I
Sbjct:  408 QVCNQLEAQVGPAANVGPYGHGDSSPLNQAMAVLQHHDAVSGTSKQHVADDYARQLAAGWGPCEVLLSNALAKLSGSKET---------FLFCRDLNISICPFSQT----SERFQVLVYNPLGRKVDRMVRL--PVRKGLFLI 535          
BLAST of DY263303 vs. ExPASy Swiss-Prot
Match: MA2B1_MACFA (Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.248e-13
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  556 EAARQLEFLKGKSSS-GP----NTNALADALAIAQHHDAVSGTERQHVAADYALRISIGYTEAEKLVASSLAFLTASRSSVGQEKAVANFQQCPLLNISYCPPSEAVSFDGKSLVVVIYNPLGWKREEVVQI 936
            +   QLE L G +++ GP    ++  L  A+A+ QHHDAVSGT RQHVA DYA +++ G+   E L++++LA L   +          +   C  LNIS CP S+  +       V++YNPLG K   +V++
Sbjct:  411 QVCNQLEALVGLAANVGPYGSGDSAPLNKAMAVLQHHDAVSGTSRQHVADDYARQLAAGWVSCEVLLSNALARLRGFKD---------HLTFCRQLNISICPLSQTAA----RFQVIVYNPLGRKVNWMVRL 529          
The following BLAST results are available for this feature:
BLAST of DY263303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MANA_DICDI3.512e-1742.73Lysosomal alpha-mannosidase OS=Dictyostelium disco... [more]
MA2B1_FELCA4.293e-1538.64Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2... [more]
MA2B1_BOVIN1.631e-1437.88Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B... [more]
MA2B1_MOUSE8.096e-1438.64Lysosomal alpha-mannosidase OS=Mus musculus GN=Man... [more]
MA2B1_HUMAN8.096e-1437.88Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
MA2B1_CAVPO8.096e-1436.36Lysosomal alpha-mannosidase OS=Cavia porcellus GN=... [more]
MA2B1_MACFA5.248e-1337.12Lysosomal alpha-mannosidase OS=Macaca fascicularis... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BE08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263303 ID=DY263303; Name=DY263303; organism=Citrus clementina; type=EST; length=1175bp
TCTTGTGCCCCTCAGTCAAGTGCCGAAACGCTGATTCCTAACCCTATGCC
GCCTCCTCTAGCCGCGACCCAGCTTCCTCTGCTGCGCCTGATGCCGGGAA
TGGCTCTCCAAGGCTACAAATCCCCTGGGTTGACCTCCCCGCCTCCAAAT
CCACCGTGACACATCGCCCATGGCTGTGCTATATTGGTCGTTTTCGGCCC
TCCGCCCTCTACATCGCCGCTGACCACGGGTTCCGTACCACTGGATCCTT
CTCCCGCCCCGCCACCGTGGCCCGTCGATGTTGCCAGTAGTGGGTTAAGG
TGGAGTTACATCAATTTCAGCAACATAGCTTCAAGAGATGAAAATTGTTG
TTGAACGGTGTTAAATCACTTGTCAATGGTGGCCTTGATCGATCCAACCT
CCGCTTCCAATTTCTCTTCAAGCGCATCTACCTTATTTGCTGCCATTGTC
CCAGGATTCTTGCTCTGATACCACTTTGATCCGACTTAGGGCTAAATTAG
GGCTGATTTTTATTGATTGAATCAAAAGAAAGAACAATTTTGACCTACGA
TTCGAGAGGCAGCAAGGCAATTAGAATTCCTTAAAGGAAAAAGCAGTTCA
GGTCCAAACACAAATGCCTTGGCTGATGCTCTGGCAATTGCTCAGCATCA
TGATGCAGTTAGCGGTACAGAACGGCAGCATGTTGCTGCTGATTATGCTT
TGCGAATTTCTATAGGATATACCGAGGCTGAGAAATTGGTTGCCTCTTCA
CTTGCCTTTTTGACAGCCTCAAGATCAAGTGTTGGACAGGAGAAAGCGGT
TGCAAACTTTCAGCAGTGTCCGCTTCTTAATATAAGTTACTGTCCTCCAT
CAGAAGCAGTCTCGTTCGATGGGAAAAGCCTGGTAGTTGTCATCTACAAT
CCTCTGGGATGGAAAAGGGAGGAAGTAGTACAAATTCAGTCTCCTCTGAA
AAGGTTATTGTTAAGGATTCTGGTGGAAAAACAGTGAATCTCAACTCTTA
CTCTGTCAATGCCAACTGAAAATAAAAAATCCTAGTTAAAGATAATTGGG
TAAAGCCCCCATGAAAACCTTAAAAATGGCTTTGCTTTTCACATCATTAC
CCCCCTTGGTTTCACCAATAACCTGCTCCATTTGAAAACCAAAGGGTCCA
ACCCACCCTTTTTAGGGTCTAACTT
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