DY263307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 5.117e-78 Identity = 164/297 (55.22%), Postives = 218/297 (73.40%), Query Frame = 1 Query: 28 MVRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHR--VDSSESATGRPVVLSQDEVKDII-RVAISKTE-DFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVN-------MLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 M +DDL ITVP+FFRCPISLDVMKSPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+LQ+K+F+PNRTLQRLI+IWSDSV+ R V+S+E A ++DE+ D I RV I K E D E L+KIV F +ESD+N+ FLA D V +LV++++ V+ ++++ +++L I +K+ D++ NLIL +D L S+++ L + +V+ +I+ LLEFIAVDA+SK+ IAERDGL+ E +KS+S DSD LIE+SLSCLI ISS KR K L+ KLI ++ KL++D Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAP-----TRDEIADAIDRVKIEKEERDDREVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSDRRRFSNLILTNGRDRL-SVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSD 291
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB28_ARATH (U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 2.460e-72 Identity = 155/292 (53.08%), Postives = 199/292 (68.15%), Query Frame = 1 Query: 28 MVRDDLYIT-VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILS---NVNDVNML--KQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 M DDLYIT VP FF+CPISLDVMKSPVSL TGVTYDR SIQRWLD GNNTCPATMQ+LQ+KEFVPN TL RLI WSDS+ R DS + P +D I AI + ++ +KI+ FA+ESDEN+ FLA D V MLV+++S N +D +L + +++L +I KI D++ L NLIL DCL S L++K + + +I+ +LEFIAVDA+SK+ IA+ +GL+ E +K +S DSD LIEA+LS LI I+SSKR K LI KL+T+L L+TD Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLIDHWSDSINRRADSESPESDTP-------TRDEINAAIERFRIENDARSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNLILTNGGDCLTSFFLLIK-RGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD 284
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 4.342e-69 Identity = 151/284 (53.17%), Postives = 204/284 (71.83%), Query Frame = 1 Query: 40 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEIL-SNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRD-QDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSL--DSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLI 879 + YITVPSFF+CPISLDVM+SPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+L++K+FVPN TLQRLI IWSDS+ R + +S P + K+ + V + + ENL KIV F K+SD N+ FL+K V MLV+I+ + + ++ IR+LD I K+ D++ L NL+L D DCL ++LL + Q+ +++S+IES+R+L++I+ DA SK+ IAERDG+L E +KS+S+ SD LIEASLS LITIS SKR ++KLI K IT++ ++ Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLINIWSDSIGRR-HNGDSPVLNPPSGREVPTKEEVNVLLERLMSL-ENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSI--KV-DRERLSNLMLANDGGDCLTAILLAI-QRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDIL 284
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (U-box domain-containing protein 23 OS=Arabidopsis thaliana GN=PUB23 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 5.025e-25 Identity = 86/284 (30.28%), Postives = 148/284 (52.11%), Query Frame = 1 Query: 40 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSG-NNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLI-LKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 D I +P FF CPISL++MK PV + TG+TYDR SI++WL +G N+CP T Q + + PN TL+RLIQ W ++ T RP + + E++ +IR + S E+ + L ++ E+ NK L + G+ L I+SN ++ L L+L+ + + L NL+ K+D + + SL ++ Q+ +SR+ + LL+ I AD + + + E V+ L ++ +A++ L+ I R + K + +I+ + +L+ D Sbjct: 7 DEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRLIQSWC-TLNASYGVERIPTPRPPI-CKSEIEKLIRDSASSHENQVKCLKRLRQIVSENATNKRCL-EAAGVPEFLANIVSNDSENGSLTD--EALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIM-QRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD 284
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.048e-22 Identity = 78/274 (28.47%), Postives = 135/274 (49.27%), Query Frame = 1 Query: 40 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNN-TCPATMQVLQSKEFVPNRTLQRLIQIW-----SDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAV---DADSKVKIAERDGLLAETVKSL-SLDSDRRLIEASLSCLITISSSKRAK 831 DL I +P FRCPISL++M+ PV++CTG TYDRASI+ W+ GNN TCP T L +PN TL+RLIQ W S+ V+ + A V + I +S + L ++ FA++SD+N+ +A + +++ + S ++ + + +L ++L E Q + + D + L +L S+++R+ + L+E ++ AD K I+ + + + L + S RR ++ + L + S K + Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVS-VRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALL-VMLPITEPNQFVS---ISSDPGRVEFLTRLL-FDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTR 276
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.200e-22 Identity = 75/252 (29.76%), Postives = 131/252 (51.98%), Query Frame = 1 Query: 40 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIW--SDSVQHRVDSSES-----ATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVA-----FAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSL 759 D +ITVP F CPISLD+M PV + TG TYDR SI RW++ G+ TCP T Q+L VPNR L+ LI W + + + + ++S A+ P + + K + + I D S+ + A AK EN+ ++A+ G + L +L++ N + V +L+L + + +++ +M + DCL S++ VL +V+++ + L ++ + K +IA ++ + V++L+L Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAE-AGAIPHLCRLLTSENAIAQENSVTAMLNLSIYE-KNKSRIM-----EEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIA----IVDQCVEALAL 540
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 9.807e-21 Identity = 93/335 (27.76%), Postives = 150/335 (44.78%), Query Frame = 1 Query: 37 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIR--VAISKTEDFS---ENLTKIVAFAKESDENKTFLAKFD-GLVV---------------------------------------------MLVEILSNVNDVNMLKQVIRVLDL------ILNKIEDQQHLMNLILKRDQDCLNSLL----LVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLI 858 +++ IT+PS F+CPIS ++MK PV + +G+TYDR +I++W +SG TCP T VL S E +PN T++R+IQ W S E V ++ +V +I A ++ D++ E +TK+ KES+ N+ + + GLV+ LVE+L N D N + +L+L L KI Q + RD C+NSL+ ++L QE+V F+ +D L+ TV+ L +DS+ + E +L+ L I +K + K+ +KL+ Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGS--SLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRN-GDQNAAFLIKELLELNVTHVHALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVS---------RFLELD------------LVNITVEML-VDSENSVCEKALTVLNVICETKEGREKVRRNKLV 336
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.867e-20 Identity = 80/290 (27.59%), Postives = 142/290 (48.97%), Query Frame = 1 Query: 55 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRV-------------DSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 +P +FRCPISL++MK PV + TG TY+R+SIQ+WLD+G+ TCP + + L PN L+ LI +W +S + SS S R VLS E ++A TE ++ AK + +N+ +A+ G + +LVE+LS+ + V +L+L +N+ N D + ++ VLK S+++R + L ++V ++KV I + + + SL + RR + + + + + + K++ + ++ L +L+ D Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLE-----KLANGTTEQQRAAAGELRLLAKRNVDNRVCIAE-AGAIPLLVELLSSPDPRTQEHSVTALLNLSINE-------GNKGAIVDAGAITDIVEVLK-NGSMEARENAAATLFSLSVIDENKVAIGAAGAI--QALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKD 521
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (U-box domain-containing protein 22 OS=Arabidopsis thaliana GN=PUB22 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.084e-19 Identity = 84/309 (27.18%), Postives = 142/309 (45.95%), Query Frame = 1 Query: 40 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSG-NNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKTEDFSENLTKIVAFAKESDENKTFL--AKFDGLVVMLVE-------------ILSNVNDV---NMLKQ--------VIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 D I +PSFF CPISLD+MK PV + TG+TYDR SI++WL SG N+CP T QV+ + PN TL+RLIQ W ++ T +P + + E++ +I+ + S + + L ++ E+ NK L A+ + +V SN+ND+ NML+ + L ++ + + L +L+ + L L + Q+ +SR + LL+ + AD I L E ++ L + +++ L+ R + K + I+ + +L+ D Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTLRRLIQSWC-TLNASYGIERIPTPKPPI-CKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMD 308
BLAST of DY263307 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.155e-19 Identity = 78/290 (26.90%), Postives = 144/290 (49.66%), Query Frame = 1 Query: 49 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDI------IRVAISK-----TEDFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAVDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLIYHKLITELGKLITD 885 +T+P F CPISL++MK P + TG TY+R+ IQRW+D GN +CP T Q L++ PN L+ LI W +H ++ S +D+ IR + K ED +++I + +K S +N+ +A+ G + +LV++L++ D + + + L L+ E + L+ L + S++LVL+ S+++R + L +++ ++K+ I ++A V L S R +A+ + L + + K + + ++ L K++TD Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQW--CTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAE-AGAIPVLVKLLTSDGDTETQENAVTCI-LNLSIYEHNKELIML-----AGAVTSIVLVLR-AGSMEARENAAATLFSLSLADENKIIIGASGAIMA-LVDLLQYGSVRGKKDAA-TALFNLCIYQGNKGRAVRAGIVKPLVKMLTD 518 The following BLAST results are available for this feature:
BLAST of DY263307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263307 ID=DY263307; Name=DY263307; organism=Citrus clementina; type=EST; length=1261bpback to top |