DY263309

Overview
NameDY263309
Unique NameDY263309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1311
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: LAG12_ARATH (LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 4.113e-81
Identity = 138/242 (57.02%), Postives = 173/242 (71.49%), Query Frame = 2
Query:  134 DPIRSESTQPDAWHFVVPLLFAPGFLVAXXXXXXXXXXXXXXWLLNKGRPQLKINET-TRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKGWPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDLQFYLNLSESYDMFIYY 856
            DP+   S +   WHF + + FA GF                 WLL+ G   +K+N+  TRAKI KC ES+WKL YYA  +F +L++   EPW  D  LYF GWPNQELKL I LYYMCQCGFY+Y +AALL WETRRKDFAVMM+HHVIT++L+ YSY T FF+IG+IILALHDASDVFME AK+FKYSE E GA+V F LFA+SW++LRLI+FPFW+I+ TS +L  YL+++ +    +YY
Sbjct:   10 DPVVKPSME--VWHFQIAVYFAFGFFFLRLVLDRYVFQRIALWLLSTGSAPIKLNDAATRAKIVKCKESLWKLLYYAACDFFVLQVIYHEPWARDIKLYFHGWPNQELKLSIKLYYMCQCGFYVYGVAALLAWETRRKDFAVMMSHHVITIILLSYSYLTSFFRIGAIILALHDASDVFMETAKIFKYSEKEFGASVCFALFAVSWLLLRLIYFPFWIIRATSIELLDYLDMTSAEGTLMYY 249          

HSP 2 Score: 28.1054 bits (61), Expect = 4.113e-81
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLKS-GQLGK 960
            IYWW LI +MI R LK+ G++G+
Sbjct:  263 IYWWYLICAMIVRLLKNRGKVGE 285          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: ASCL3_ORYSJ (ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.842e-69
Identity = 123/227 (54.19%), Postives = 159/227 (70.04%), Query Frame = 2
Query:  176 FVVPLLFAPGFLVAXXXXXXXXXXXXXXWLLNKGRPQLKINETTRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKGWPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDLQFYLNLSESYDMFIYY 856
            F + L+F+ GF  A              +  +    +L  +E  +AKI K SES+WKLTYY +V+  +L I   EPW  DT  YF+GWPNQ +   +ML+YMCQCGFYIYSI AL+ WETRRKDFAVMM+HHV+T +LIGY+Y T FF+IG+IILALHDASDVF+E AK+ KY+E ELGA++ FGLFA+SW++LRLI+FPFW+IK +SY     L   E +   +YY
Sbjct:   12 FPLTLVFSVGFFCARFFLDRLVYKPLAAYCFSSKASKLMNDEVRQAKIVKFSESIWKLTYYGSVQAWVLLIIKQEPWSLDTMQYFEGWPNQYMTSSLMLFYMCQCGFYIYSIFALVAWETRRKDFAVMMSHHVVTSILIGYAYLTGFFRIGTIILALHDASDVFLETAKLCKYTEKELGASLFFGLFALSWLLLRLIYFPFWIIKTSSYQSIISLRKLEKFPTTLYY 238          

HSP 2 Score: 28.4906 bits (62), Expect = 1.842e-69
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLKS-GQLGK 960
            IYWW LI  MI +QL + GQ+G+
Sbjct:  252 IYWWKLICLMIMKQLNNKGQVGE 274          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: ASCL1_ORYSJ (ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.845e-51
Identity = 94/192 (48.96%), Postives = 127/192 (66.15%), Query Frame = 2
Query:  299 ETTRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDLQFYLNLSE-SYDMFIYY 856
            E TR KI K  ES WK  Y+ + E   L +  +EPWFT+T  ++ G     WP+Q++K  +   YM   GFY YSI AL+ WETRR DF V M+HHV TV LI  SY  RF ++GS++LA+HDASDVF+E  K+ KYS  +L A V F LF +SWV+LRL +FPFW+++ TSY++   L+  + ++D  IYY
Sbjct:   68 EETRKKIRKFKESAWKCVYFLSGEILSLSVTYNEPWFTNTKYFWVGPGDQVWPDQKIKWKLKAVYMYAAGFYTYSIFALMFWETRRSDFGVSMSHHVATVALIVLSYVFRFARVGSVVLAIHDASDVFLEVGKMAKYSHCDLLANVAFLLFVVSWVLLRLTYFPFWILRSTSYEVLLTLDKKKHNFDGPIYY 259          

HSP 2 Score: 33.113 bits (74), Expect = 3.845e-51
Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLKSGQLG 957
            IYWWVLI+ M+ RQ+K+  +G
Sbjct:  274 IYWWVLIYRMLVRQIKTRNVG 294          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: LAG13_ARATH (LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.448e-46
Identity = 86/177 (48.59%), Postives = 116/177 (65.54%), Query Frame = 2
Query:  308 RAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDLQFYLN 823
            + KI K  ES WK  YY + E   L +  +EPWF +T  ++ G     WP+Q+ KL + L YM   GFY YSI AL+ WETRR DF V M HH+ T++LI  SY   F ++GS++LALHDASDVF+E  K+ KYS  E  A+  F LF +SW+ILRLI++PFW++  TSY++   L+
Sbjct:   69 KKKIRKFKESAWKCVYYLSAEILALSVTYNEPWFMNTKYFWVGPGDQTWPDQQTKLKLKLLYMFVAGFYTYSIFALVFWETRRSDFGVSMGHHIATLILIVLSYVCSFSRVGSVVLALHDASDVFLEVGKMSKYSGAERIASFSFILFVLSWIILRLIYYPFWILWSTSYEVVLELD 245          

HSP 2 Score: 26.9498 bits (58), Expect = 4.448e-46
Identity = 8/16 (50.00%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLK 942
            IYWWVL++ M+ +Q++
Sbjct:  272 IYWWVLMYRMLVKQIQ 287          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: ASC1_SOLLC (Protein ASC1 OS=Solanum lycopersicum GN=Asc-1 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 2.700e-45
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 2
Query:  308 RAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDLQFYLNLSE 832
            R KI+K  ES WK  Y+ + E   L + C+EPWFTD+  ++ G     WPN ++KL + L YM   GFY YSI A L WETRR DFA  + HHV TV LI  SY   F +IGS++LALHD SDVFME AK+ KYS  +L A + F LFA+ +  LR+I +PFW+I+ T Y+L + L++ +
Sbjct:   69 RKKINKFKESAWKFVYFLSAELLALSVTCNEPWFTDSRYFWAGPGDVVWPNLKMKLKLKLLYMYAGGFYFYSIFATLYWETRRYDFAAQIIHHVTTVSLIVLSYVYGFARIGSVVLALHDGSDVFMEIAKMSKYSGFDLIADIFFSLFALVFTSLRIICYPFWIIRSTCYELLYVLDIQK 248          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: LAG11_ARATH (LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.067e-44
Identity = 84/179 (46.93%), Postives = 115/179 (64.25%), Query Frame = 2
Query:  287 LKINETTRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDL 808
            +K  +    K+ K  ES WK  YY + E   L +  +EPWF++T  ++ G     WP+Q +K+ +   YM   GFY YSI AL+ WETRR DF V M HH+ T++LI  SY  R  + GS+ILALHDASDVF+E  K+ KY   E  A++ F LFA+SWV+LRLI++PFW++  TSY +
Sbjct:   65 IKDRKKNSPKVRKFKESAWKCIYYLSAELLALSVTYNEPWFSNTLYFWIGPGDQIWPDQPMKMKLKFLYMFAAGFYTYSIFALVFWETRRSDFGVSMGHHITTLVLIVLSYICRLTRAGSVILALHDASDVFLEIGKMSKYCGAESLASISFVLFALSWVVLRLIYYPFWILWSTSYQI 243          

HSP 2 Score: 26.1794 bits (56), Expect = 1.067e-44
Identity = 8/16 (50.00%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLK 942
            I+WWVLI+ M+ +Q++
Sbjct:  274 IFWWVLIYRMLVKQVQ 289          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: ASCL2_ORYSJ (ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.363e-44
Identity = 82/172 (47.67%), Postives = 110/172 (63.95%), Query Frame = 2
Query:  308 RAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYDL 808
            R KI K  ES WK  Y+ + E   L +   E WFT T  ++ G     WP+Q +K  + L YM   GFY YSI AL  WE +R DF + M HHV++V+LI  SY  RF ++GSI+LA+HDASDVF+E  K+ KYS  +L A V F +F  SW +LRLI++PFW++  TSY++
Sbjct:   64 RIKIRKFKESAWKCIYFLSAELLALSVTYKESWFTSTKNFWVGPGDQVWPDQRIKFKLKLVYMYAAGFYTYSIFALQFWEIKRSDFGISMVHHVVSVILIALSYIFRFARVGSIVLAIHDASDVFLELGKISKYSGYQLLADVSFLIFVCSWAVLRLIYYPFWILWSTSYEV 235          

HSP 2 Score: 26.9498 bits (58), Expect = 2.363e-44
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQ-LKSGQLG 957
            IYWWVL++ M+  Q L  G +G
Sbjct:  267 IYWWVLMYRMLVEQILSKGHVG 288          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: ASCL_SOLLC (ASC1-like protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.965e-43
Identity = 93/206 (45.15%), Postives = 124/206 (60.19%), Query Frame = 2
Query:  263 LLNKGRPQLKINETT--RAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKG-----WPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTSYD-LQFYLNLSESYDMFIYY 856
            +  KG+  ++ NET   R +I K  ES WK  Y+ + E   L +  +EPWFT+T  ++ G     WP+Q  K  +   YM   GFY YSI AL+ WETRR DF V M+HHV T +LI  SY  RF ++GS++LA+HDASD+F+E  K+ KYS  E  A   F    +SW+ILRLI++PFWV+  TSY+ LQ         D  IYY
Sbjct:   52 IFGKGQEVVE-NETDDRRRRIRKFKESAWKCIYFLSAEVFALVVTYNEPWFTNTRYFWVGPGDQVWPDQMYKSKLKALYMYTGGFYTYSIFALIFWETRRSDFGVSMSHHVATAILIVLSYNIRFARVGSVVLAIHDASDIFLEIGKMSKYSGAE--ALASFRYLCLSWIILRLIYYPFWVLWSTSYEVLQTLDKEKHKVDGPIYY 254          

HSP 2 Score: 29.6462 bits (65), Expect = 1.965e-43
Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  895 IYWWVLIFSMIWRQLKS-GQL 954
            IYWWVLI+ M+ +Q+++ GQL
Sbjct:  269 IYWWVLIYRMLVKQIQARGQL 289          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: LASS2_MOUSE (LAG1 longevity assurance homolog 2 OS=Mus musculus GN=Lass2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 6.042e-29
Identity = 61/175 (34.86%), Postives = 103/175 (58.86%), Query Frame = 2
Query:  296 NETTRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKGWPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCTS-YDLQFY 817
            N+   + + K  E+ W+ TYY       + +  D+PWF D    ++G+P Q +      YYM +  FY +S+   +  + +RKDF   + HHV T++L+ +S+F  + + G++I+ALHDASD  +E+AK+F Y+  +     +F +FAI ++I RL+  PFW++ CT  Y L+ Y
Sbjct:  123 NQDRPSLLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEGYPIQSIIPSQYWYYMIELSFY-WSLLFSIASDVKRKDFKEQIIHHVATIILLCFSWFANYVRAGTLIMALHDASDYLLESAKMFNYAGWKNTCNNLFIVFAIVFIITRLVIMPFWILHCTMIYPLELY 296          
BLAST of DY263309 vs. ExPASy Swiss-Prot
Match: LASS2_HUMAN (LAG1 longevity assurance homolog 2 OS=Homo sapiens GN=LASS2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.346e-28
Identity = 61/175 (34.86%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  296 NETTRAKISKCSESMWKLTYYATVEFCILKIACDEPWFTDTNLYFKGWPNQELKLPIMLYYMCQCGFYIYSIAALLTWETRRKDFAVMMAHHVITVLLIGYSYFTRFFQIGSIILALHDASDVFMEAAKVFKYSENELGATVIFGLFAISWVILRLIFFPFWVIKCT-SYDLQFY 817
            N+   + + K  E+ W+ T+Y       + +  D+PWF D    ++G+P Q        YYM +  FY +S+   +  + +RKDF   + HHV T++LI +S+F  + + G++I+ALHD+SD  +E+AK+F Y+  +     IF +FAI ++I RL+  PFW++ CT  Y L+ Y
Sbjct:  123 NQDRPSLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEGYPIQSTIPSQYWYYMIELSFY-WSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITRLVILPFWILHCTLVYPLELY 296          
The following BLAST results are available for this feature:
BLAST of DY263309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
LAG12_ARATH4.113e-8157.02LAG1 longevity assurance homolog 2 OS=Arabidopsis ... [more]
ASCL3_ORYSJ1.842e-6954.19ASC1-like protein 3 OS=Oryza sativa subsp. japonic... [more]
ASCL1_ORYSJ3.845e-5148.96ASC1-like protein 1 OS=Oryza sativa subsp. japonic... [more]
LAG13_ARATH4.448e-4648.59LAG1 longevity assurance homolog 3 OS=Arabidopsis ... [more]
ASC1_SOLLC2.700e-4549.44Protein ASC1 OS=Solanum lycopersicum GN=Asc-1 PE=2... [more]
LAG11_ARATH1.067e-4446.93LAG1 longevity assurance homolog 1 OS=Arabidopsis ... [more]
ASCL2_ORYSJ2.363e-4447.67ASC1-like protein 2 OS=Oryza sativa subsp. japonic... [more]
ASCL_SOLLC1.965e-4345.15ASC1-like protein OS=Solanum lycopersicum PE=2 SV=... [more]
LASS2_MOUSE6.042e-2934.86LAG1 longevity assurance homolog 2 OS=Mus musculus... [more]
LASS2_HUMAN1.346e-2834.86LAG1 longevity assurance homolog 2 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11BF03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263309 ID=DY263309; Name=DY263309; organism=Citrus clementina; type=EST; length=1311bp
ATCAATCTCTTCTTTTGCGCAAAATTAGCTCGAAAATTAAAATGCGGTTG
TTTTCATTTTCGGCGACGATTAATTGGATTTGTTTTTAGTTTAACTTTTG
TCGTTCTGAATATTGACTCGAAAATCGCGCATGGACCCGATCCGTAGTGA
GAGTACACAGCCGGACGCGTGGCATTTCGTCGTCCCTTTACTCTTCGCTC
CCGGCTTCCTCGTCGCCAGGTTCTTTTTGGATAGATTCATCTTTCGAAGG
CTAGCTCTCTGGTTGTTGAATAAAGGACGTCCCCAGTTGAAGATAAATGA
AACTACAAGGGCAAAAATTAGCAAATGTTCAGAATCTATGTGGAAGCTGA
CATACTATGCTACTGTTGAGTTCTGTATTCTCAAAATTGCCTGCGATGAG
CCATGGTTCACAGATACAAACTTGTACTTCAAAGGCTGGCCAAATCAAGA
GTTGAAGCTTCCTATAATGCTTTATTACATGTGCCAATGTGGATTCTATA
TCTATAGCATTGCTGCACTTCTTACATGGGAGACTCGAAGGAAGGATTTC
GCTGTGATGATGGCTCATCATGTAATTACTGTTCTCCTGATTGGATACTC
ATATTTTACTAGGTTTTTCCAGATTGGCTCTATTATTCTTGCTCTGCATG
ATGCAAGTGATGTTTTTATGGAAGCTGCCAAAGTTTTTAAATATTCTGAG
AATGAACTTGGAGCAACCGTGATCTTTGGATTATTTGCAATATCTTGGGT
CATTCTACGATTAATATTCTTCCCATTTTGGGTCATCAAATGTACAAGCT
ATGACCTTCAGTTCTACTTGAACCTATCAGAGAGTTATGATATGTTCATT
TACTACATGTTCAATANCATGTTGCTGATGCTGTTTGTGTTCCCATATAC
TGGTGGGTTCTCATATTCTCAATGATATGGAGACAGCTGAAAAGTGGTCA
ACTGGGGAAGATATAAGATCTGATTCTGAGGATGATGATTAGGTGGAAGA
TTTTGTTTCCACCTTATTGGTTTCTTGCCGAAGAAGCTACCCATGGGGGA
ATTGGTTACTTTGGGTCTCTTGGTAATTAGCCTTTGCCCTTAATTGGGAT
TCATATCACGAGGCTGGTGAAAATTTTTTGTCCCTAAAAAATTGGTTCAG
CGATTTTTCCCCCCGGGGAAAAAAAAAACCACAAACCCTCTAAACCTAAA
TTTTCGTTCCTTCCTTTTTTTTTTTCCTCGGTTTCAAAAAAAAAAAAAGG
GGGGGGTTTTCCCCGTGTTATTAAAAATTTGTTGTTTTTTTTTTTCTTGG
GAGAAAAAAAA
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