DY263312

Overview
NameDY263312
Unique NameDY263312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.876e-18
Identity = 87/299 (29.10%), Postives = 127/299 (42.47%), Query Frame = 1
Query:  106 FAFGFRQLNSSSDLFLLAIWFNKIP-----ERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIWDEKPNKI--VSDAAMLDTGNFVLMASGNNSDYAWQSFKSPTDTILPTQILDLGSVLVSRLTETNFSRGRFELHFSNGNL--------QLIPVAWPTPSQYESYYTSDTYSANSSESGNQLVFNESADIYIVKNNGQIVQLPQWYQLSLIADHY-----YRATLDFDGVFTEYAYPKNSAPNKSWFAIQRLPNNKCEAISDELGSGACGFNSYCLIQNGRLFCECPPGY 942
            F+ GF ++ + +  F  ++W++K        +TI+W AN D RPV A R +        ++L D  G A+W    N    V  A +LDTGN V+  SG N+   WQSF SPTDT LPTQ++   + LV   T  + S G +   FS+ ++        Q+  + WP P Q  + Y       NS+  G            ++ ++G +         +L+A         R TLD DG    Y+   +     SW          C         G CG N  C   +    C CPPGY
Sbjct:   55 FSSGFYEVYTHA--FTFSVWYSKTEAAAANNKTIVWSANPD-RPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRARLLDTGNLVIEDSGGNT--VWQSFDSPTDTFLPTQLITAATRLVP--TTQSRSPGNYIFRFSDLSVLSLIYHVPQVSDIYWPDPDQ--NLYQDGRNQYNSTRLG------------MLTDSGVLASSDFADGQALVASDVGPGVKRRLTLDPDGNLRLYSMNDSDG---SWSVSMVAMTQPCNI------HGLCGPNGIC-HYSPTPTCSCPPGY 322          
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.929e-14
Identity = 84/294 (28.57%), Postives = 126/294 (42.86%), Query Frame = 1
Query:  106 FAFGFRQLNSSSDLFLLAIWFNKIPERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIWD------EKPNKIVSDAAMLDTGNFVLMASGNN--SDYAWQSFKSPTDTILPTQIL--DLGSVLVSRLTETNFSRGRFELHFS-NGNLQLIPVAWPTPSQYESYYTSDTYSANSSESGNQL----VFNESADIYIVKNNGQIVQLPQWYQLSLIADHYYRATLDFDGVFTEYAYPKNSAPNKSWFAIQRLPNNKCEAISDELGSGACGFNSYCLIQNGRLFCECPPGY 942
            F  GF +  SSS  +L  IW+ K P RT +W AN D  P+    G TL+++   L+L D   +++W        + + +V  A +LD GNFV+  S +N  S + WQSF  PTDT+LP   L  DL + L   LT    S       +S    L+ +P         E Y +S ++  + S   N      +  +    Y+V N  +  +   +  L      Y R T+   G F    +  +S     W      PN++C+          CG  SYC + N    C C  G+
Sbjct:   56 FELGFFKTTSSSRWYL-GIWYKKFPYRTYVWVANRD-NPLSNDIG-TLKISGNNLVLLDHSNKSVWSTNVTRGNERSPVV--AELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRFLTSWRSSDDPSSGDYSYKLELRRLP---------EFYLSSGSFRLHRSGPWNGFRISGIPEDQKLSYMVYNFTENSEEAAYTFLMTNNSFYSRLTISSTGYFERLTWAPSSV---VWNVFWSSPNHQCDMYR------MCGPYSYCDV-NTSPVCNCIQGF 325          
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.612e-14
Identity = 83/295 (28.14%), Postives = 131/295 (44.41%), Query Frame = 1
Query:  106 FAFGFRQLNSSSDLFLLAIWFNKIPERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIWD------EKPNKIVSDAAMLDTGNFVLMASGNN--SDYAWQSFKSPTDTILPTQILD------LGSVLVSRLTETNFSRGRFELHFSNGNLQLIPVAWPTPSQYESYYTSDTYSANSSESGNQLVFNESADIYIVKNNGQIVQ-LPQWYQLSLIADHYY-RATLDFDGVFTEYAYPKNSAPNKSWFAIQRLPNNKCEAISDELGSGACGFNSYCLIQNGRLFCECPPGY 942
            F  GF + NSSS  +L  IW+ K+ +RT +W AN D  P+ +  G TL+++       D   +++W        + + +V+D  +L  GNFV+  S NN  S + WQSF  PTDT+LP   L       L   L SR +  + S G F       + +L P   P     E Y +S  +    S   N + F+   D   +     I Q +   Y+  +  + +Y R  + F G   +  +  +S    S++A     +++C          ACG  SYC++ N    C C  G+
Sbjct:   53 FELGFFRTNSSSRWYL-GIWYKKVSDRTYVWVANRD-NPLSSSIG-TLKISGNNPCHLDHSNKSVWSTNLTRGNERSPVVAD--VLANGNFVMRDSNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDF-------SYKLEPRRLP-----EFYLSSGVFLLYRSGPWNGIRFSGLPDDQKLSYLVYISQDMRVAYKFRMTNNSFYSRLFVSFSGYIEQQTWNPSSQMWNSFWAFPL--DSQCYTYR------ACGPYSYCVV-NTSAICNCIQGF 321          
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.382e-12
Identity = 84/313 (26.84%), Postives = 132/313 (42.17%), Query Frame = 1
Query:  106 FAFGFRQLNSSSDLFLLAIWFNKIPERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIW------DEKPNKIVSDAAMLDTGNFVLMASGNN--SDYAWQSFKSPTDTILPTQIL------DLGSVLVSRLTETNFSRGRFELHFSNGNLQLIPVAWPTPSQYESYYTSDTYSANSSESGNQLVFNE-------SADIY-IVKNNGQIVQLPQWYQLSLIADHYY-RATLDFDGVFTEYA-YPKNSAPNKSWFAIQRLPNNKCEAISDELGSGACGFNSYCLIQNGRLFCECPPGYLISGSNEQNL 972
            F  GF + NS    + L +W+ K+ +RT +W AN D  P+    G TL+++   L+L D   + +W        + + +V++  +L  GNFV+  S NN  S+Y WQSF  PTDT+LP   L       L   L S  +  + S G F                 T S  E Y + + +  + S   N + F+        S  +Y  ++NN ++      Y   +  + +Y R TL  +G F     YP     N+ W       + +C+          CG  +YC + N    C C     I G N +N+
Sbjct:   57 FEVGFFRTNSR---WYLGMWYKKVSDRTYVWVANRD-NPLSNAIG-TLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAE--LLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLE------------TQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVA-----YTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFW---SSPVDPQCDTYI------MCGPYAYCDV-NTSPVCNC-----IQGFNPRNI 330          
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.022e-12
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 1
Query:  103 DFAFGFRQLNSSSDLFLLAIWFNKIPERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIWDEK----PNKIVSDAAMLDTGNFVLMASGNN--SDYAWQSFKSPTDTILP 435
            +F  GF + NSSS  +L  IW+ K+ +RT +W AN D  P+    G TL+++   L+L     +++W         ++   A +L  GNFV+  S NN  S+Y WQSF  PTDT+LP
Sbjct:   55 NFELGFFRTNSSSRWYL-GIWYKKLLDRTYVWVANRD-NPLSNAIG-TLKISGNNLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLP 168          
BLAST of DY263312 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.996e-11
Identity = 77/284 (27.11%), Postives = 113/284 (39.79%), Query Frame = 1
Query:  136 SSDLFLLAIWFNKIPERTIIWHANEDYRPVLAPRGSTLELTAAGLLLKDPGGQAIWD------EKPNKIVSDAAMLDTGNFVLMASGNN--SDYAWQSFKSPTDTILPTQIL------DLGSVLVSRLTETNFSRGRFELHFSNGNLQLIPVAWPTPSQYESYYTSDTYSANSSESGNQLVFNESAD----IYIVKNNGQIVQLPQWYQLSLIADHYYRATLDFDGVFTEYAYPKNSAPNKSWFAIQRLPNN-KCEAISDELGSGACGFNSYCLIQNGRLFCEC 930
            SS  + L +W+ K+ ERT +W AN D  P+    G TL+++   L+L D   +++W        + + +V  A +L  GNFVL  S  N  S + WQSF  PTDT+LP   L       L   L S  +  + S G F        L             E Y   D +  + S   N + F+   +     Y+V N  Q  +   +  L      Y R T+   G F    +  +S     W      P + +C+          CG  SYC + N    C C
Sbjct:   64 SSSRWYLGMWYKKLSERTYVWVANRD-NPLSCSIG-TLKISNMNLVLLDHSNKSLWSTNHTRGNERSPVV--AELLANGNFVLRDSNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRFLTSWRSSDDPSSGDFSYKLQTRRLP------------EFYLFKDDFLVHRSGPWNGVGFSGMPEDQKLSYMVYNFTQNSEEVAYTFLMTNNSIYSRLTISSSGYFERLTWTPSSG---MWNVFWSSPEDFQCDVYK------ICGAYSYCDV-NTSPVCNC 321          
The following BLAST results are available for this feature:
BLAST of DY263312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
KPRO_MAIZE2.876e-1829.10Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SLSG3_BRAOL1.929e-1428.57S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SLSG4_BRAOL5.612e-1428.14S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SRK6_BRAOE1.382e-1226.84Putative serine/threonine-protein kinase receptor ... [more]
SLSG6_BRAOL4.022e-1238.46S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG2_BRAOA1.996e-1127.11S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BF07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263312 ID=DY263312; Name=DY263312; organism=Citrus clementina; type=EST; length=1331bp
CTTTCTCTTCCACTGCTACCATTTTTATCCGCTGCCAACATACCTTTGGG
TTCAACTCTATCAAGCACCAGCAACAACTCTTCATGGATTTCACCTTCAA
GGGATTTTGCTTTCGGATTTCGCCAACTAAATAGCAGTTCGGATCTTTTC
TTGCTTGCCATTTGGTTCAACAAAATACCTGAAAGAACCATCATTTGGCA
TGCCAATGAAGACTACCGCCCAGTCCTAGCTCCCAGAGGATCAACACTTG
AACTTACTGCCGCCGGCCTTCTGCTTAAAGATCCTGGAGGCCAAGCAATA
TGGGATGAAAAGCCCAACAAAATTGTATCAGATGCTGCCATGCTTGATAC
AGGTAATTTTGTGCTTATGGCCTCTGGTAACAATTCCGATTATGCTTGGC
AGAGTTTTAAAAGTCCAACAGACACCATCTTGCCTACCCAAATATTAGAT
TTGGGTAGCGTGTTGGTTTCCAGGCTTACAGAAACCAACTTCTCCAGAGG
CAGGTTTGAGCTCCATTTTTCAAATGGAAACCTTCAGCTCATTCCTGTGG
CCTGGCCAACCCCATCCCAATACGAAAGTTATTATACCAGTGATACTTAC
AGTGCCAATTCTTCTGAGTCTGGTAATCAGCTGGTTTTTAATGAATCAGC
TGACATATACATAGTGAAAAATAATGGTCAAATTGTCCAATTGCCACAAT
GGTATCAACTCTCTCTTATTGCGGACCACTATTATCGAGCAACGTTGGAT
TTTGATGGAGTATTCACAGAATATGCTTATCCAAAGAATTCTGCTCCTAA
CAAAAGCTGGTTTGCTATACAACGTCTTCCTAACAACAAATGCGAAGCTA
TATCTGATGAGTTAGGTAGTGGTGCCTGTGGCTTCAATAGCTACTGCTTA
ATTCAAAATGGGAGACTTTTTTGTGAATGCCCTCCAGGGTATTTAATTTC
TGGATCCAACGAACAGAATTTAGTGGTTGCAGGGCGAAATACTGGGCAAG
GCTGTGGACCAAAAGATGGATCTAGAAACGCAGAAAAGTTGGAGGAAATA
AGGGAACTCCCGTAAGTAAATTGGCCCTTATGAAAAATATGAAAGGTTGG
AAACCCTAAATTCAAACAAAATGGGGAAAATTCTGGCTTGGAAAAATGGT
GGGGGGGCCGTTTGCCCGGTTGAGAAGGGTAAAAAAAGGTTTTGAAAAAA
AAAAAAATTGCCCCCTTCCCCAAAAAGGGGGGGGTCCCGGGGGAAAACCC
CCGGAAAATTTTTAAAAAAAAACCTTTCCCTTTTTAAGGGGGGAAAAAAG
AAAAGAGAAGAGGAGGGGTTTTTTTCTCCCG
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