DY263316

Overview
NameDY263316
Unique NameDY263316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1231
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263316 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.101e-74
Identity = 130/204 (63.73%), Postives = 149/204 (73.04%), Query Frame = 3
Query:  303 TKVGTVPSEMKAWLYGEYGGVDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLERTGFSAGKXXXXXXXXXXXXXXXXQLAKQVFGASRVAATSSTRNLEFLKKLG 914
            T   ++P EMKAW+Y +YGGVDVLK +  + VP++KEDQVLIKVVAAALNPVD KRRQGKFKATDSPLPT                 K+ KEGDEVY +++EKALEGPKQFGSLAEYTAVEE+LLA KPKN+DF QAAGLPLAIETA EGL RT FSAGK                QLAK V+GAS+VAAT+ST  LE ++ LG
Sbjct:   69 TADASIPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLG 272          

HSP 2 Score: 48.1358 bits (113), Expect = 1.101e-74
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  941 KTNFEDLPEKFDLIYDAIGQCDRPIKAHQKGGPV 1042
            K N EDLP+K+D+++DAIG CD+ +K  ++GG V
Sbjct:  281 KENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKV 314          
BLAST of DY263316 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.127e-13
Identity = 64/203 (31.53%), Postives = 87/203 (42.86%), Query Frame = 3
Query:  330 MKAWLYGEYGG-VDVLKFDEKVTVPQVKEDQVLIKVVAAALNPVDGKRRQGKFKAT-DSPLPTXXXXXXXXXXXXXXXXXKEFKEGDEVYGDINEKALEGPKQFGSLAEYTAVEERLLAPKPKNLDFVQAAGLPLAIETAYEGLER------TGFSAGKXXXXXXXXXXXXXXXXQLAKQVFGASRVAATSSTRNLEFLKKLG 914
            M A  Y  YGG  D LK  E V VP  K D++L+K+ AA LNP+D K ++G  +       PT                   FK GD+V   ++          G+LAEY   +E L   +P  +   + A LP+A  TA++ L +       G    K                QLAK   G + V AT   RNL+F+K LG
Sbjct:    6 MHAIQYSGYGGGTDALKHVE-VAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSHAT------GGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK--LGNTHVTATCGARNLDFVKGLG 199          
The following BLAST results are available for this feature:
BLAST of DY263316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
QORL_ARATH1.101e-7463.73Quinone oxidoreductase-like protein At1g23740, chl... [more]
QORH_SPIOL1.127e-1331.53Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BF11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263316 ID=DY263316; Name=DY263316; organism=Citrus clementina; type=EST; length=1231bp
ATTTACATACATAAGAATTAAGAAGGGAGATGTGATAAGCATAAGCCGTT
GGTGAGAACTACAACGTACGGTTGCAACAAATGGAGACCATACTTACTAC
TACTGCTTCTAAACTCACAATCTTTCATTCTATCTCCTCCACCAAATTAA
ATTCATTTTCTCGAAAATTTTCCGTCGGTTTCTCGGGAAACAAAAACAGG
AAAAAAGTAACCACCCTTAAGCAAGGCTCATTTTCTTACCTTCCTCTTGG
AGTTCAAGCAAGTGCATCACAAGCTGCAGCATCGTCCACTGAGGCTGAGC
CCACTAAAGTGGGAACTGTTCCAAGCGAGATGAAGGCTTGGCTGTATGGG
GAATATGGGGGCGTTGATGTTTTGAAGTTCGACGAGAAAGTGACAGTGCC
TCAAGTGAAGGAGGATCAAGTGTTGATCAAAGTTGTCGCTGCTGCCCTTA
ATCCTGTTGATGGGAAGAGAAGGCAGGGCAAGTTCAAGGCCACTGATTCT
CCTCTCCCGACTGTTCCAGGCTATGATGTTGCTGGTGTAGTGGTAAAGGT
TGGCACTCAAGTGAAGGAATTTAAGGAGGGGGATGAAGTATACGGGGACA
TAAATGAGAAAGCTTTGGAAGGGCCCAAACAGTTTGGCTCTTTGGCGGAG
TACACTGCGGTTGAAGAGAGGTTACTGGCCCCAAAACCTAAGAATTTGGA
CTTTGTTCAGGCTGCTGGCCTTCCGCTCGCTATCGAGACAGCCTATGAGG
GTCTAGAAAGGACTGGTTTCTCTGCTGGTAAATCTATTCTTGTTTTGAAT
GGTTCTGGTGGTGTTGGAAGCTTGGTTATTCAGCTGGCGAAACAAGTATT
TGGTGCTTCAAGAGTTGCAGCAACTTCGAGTACCAGGAACTTGGAGTTCT
TGAAGAAGTTGGGGTGCTGATTTGGCTATTGATTACACCCAAGACNAACT
TTGAAGATTTGCCAGAAAAATTTGACTTAATCTATGATGCTATTGGGCAA
TGTGATAGACCAATAAAGGCCCATCAAAAGGGGGGGCCCGTGGGGAACTC
CTAACGGGCGCTGTTACACCTCCGGGCTTCCAAATTTGTTGGCCTTTCAA
AGGGAAAAATTTTTAAAAAAACAAAAATCCAAATTTTAAAGAAGGGAAAA
GGGGAAACCCCCTCAAAAAACCCCCAAGGGGACACTTTCCCCCTTTCCCC
CCGGGGTGTTTGGAGGCCTTTTTTTAAAAAA
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