DY263331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263331 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 8.879e-30 Identity = 77/157 (49.04%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 23 ASRDKKPAKPSSSR-------AGGIRTLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQ-----PEPIVHNIVFWANGFTVNDGPLRRLDDPENASFL 457 A +K+ PS R AG IRT +DLNR EYYTGG+KSGM+VQDP K DVD +F+QA++ AV+ P+E FTG ARLLSGE V S+PQQ P+ I+H I FW NGFTVNDGPLR DPENA+F+ Sbjct: 111 AGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMVQDPKK--VKDVDELFDQARQ-SAVDRPVE--PSRSASTSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFM 262 HSP 2 Score: 72.0182 bits (175), Expect = 2.763e-21 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 699 LQSIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFQGVGRTLGSSSTAAS 872 + SI +SECP ELEPADK+ VHV+L+RR EP K PFQGVGRTLG+S + +S Sbjct: 262 MNSISRSECPSELEPADKKIPVHVDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSS 319 HSP 3 Score: 49.2914 bits (116), Expect = 2.763e-21 Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 2 Query: 893 PGHTASSSSEGLVVDENLPSTSIQIQVADGTRLKAHFNPSHPIRQL 1030 P + A + S GLVVD P+TSIQ+++ADGTRL + FN H +R + Sbjct: 328 PMNVAPAPSRGLVVDPAAPTTSIQLRLADGTRLVSRFNNHHTVRDV 373 HSP 4 Score: 22.7126 bits (47), Expect = 2.763e-21 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 1 Query: 1060 GTARKYQLANKGIPPK 1107 G +++YQL G PPK Sbjct: 383 GGSKEYQLLTMGFPPK 398
BLAST of DY263331 vs. ExPASy Swiss-Prot
Match: NSF1C_DICDI (NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.427e-13 Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 2 Query: 50 PSSSRAGGIRTLSDLNRRS------GPXXXXXXXAPQEYYTGGEKSGMLVQDPSK-----GDPNDVDAIFNQAKELGAV---EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEP----IVHNIVFWANGFTVNDGPLRRLDDPENASFLE 460 P+ R GGIRTLSD N Q+Y+TGGEKSG++V+ K G + V+ +F+ AK GAV E +E G G S P++ +P + + FW GFT++DGPLR+ D+PEN L+ Sbjct: 93 PAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNGGSGDIVNDVFDSAKRHGAVASNEKKVEKPDSFDSVGYQLGATD--QGNRNVSKPKEKDPNSQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLD 245
BLAST of DY263331 vs. ExPASy Swiss-Prot
Match: UBX1_EMENI (UBX domain-containing protein 1 OS=Emericella nidulans GN=ubx1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.412e-11 Identity = 51/160 (31.87%), Postives = 68/160 (42.50%), Query Frame = 2 Query: 17 SMASRDKKPAKPSSSRAGGIR---TLSDLNRRSGPXXXXXXXAPQEYYTGGEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXXFTGTARLLSGETVPSA----------PQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFL 457 S S P + SSSR + TL DL + Q+++ GGEKSG+ VQ+P ++ P + FTG AR L GE PS PQ P + + FWA+GF+V+DG L R DDP+NA L Sbjct: 60 SAKSSSSTPRESSSSRKQPPKKFATLGDLASGAADSSDDDDDENQDFFAGGEKSGLAVQNPDDLKKKIIEKARRTQLPASDDSEPRRNY--------FTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWADGFSVDDGELYRSDDPQNAEIL 211 The following BLAST results are available for this feature:
BLAST of DY263331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263331 ID=DY263331; Name=DY263331; organism=Citrus clementina; type=EST; length=1266bpback to top |