DY263334

Overview
NameDY263334
Unique NameDY263334
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1301
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: IBR5_ARATH (Protein-tyrosine-phosphatase IBR5 OS=Arabidopsis thaliana GN=IBR5 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 1.402e-86
Identity = 163/257 (63.42%), Postives = 196/257 (76.26%), Query Frame = 2
Query:  128 MRKRERENPCSVCGHYHKYEEGEVCGICGHRSASSAEKTTTLQV--SAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTPLPALSAG-MPSFSFGFPKGNNDXXXXXXXXXXXXXXFNTNFGATSIFAGRPSNVPTQGFTFGA 889
            MRKRERENPCS+CGHYHKYEEGEVCG+CGH    S++     QV  SAFPSEILP+FLYLGSYDNASRS LLKTQGISRVLNTVP CQNLY+NSFTYH L+++K+LQFDDAI+FL+QCE+DKA VLVHCM GK+RS A+V+AYLMK KGWRLA+SHQWVK+RRPS +++ + +QQLQE+EQ IFGS        + A++    P+F FGFPK +N               FN N   +SIF+   S++P Q FTFGA
Sbjct:    1 MRKRERENPCSICGHYHKYEEGEVCGVCGHCMPVSSDTVAPQQVHVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPMCQNLYRNSFTYHGLDNEKVLQFDDAIKFLDQCEKDKARVLVHCMSGKSRSPAVVVAYLMKRKGWRLAESHQWVKQRRPSTDISPEFYQQLQEFEQGIFGS------EMMSAMNINDAPTFGFGFPKIDNQ---------AQAPVFN-NAPTSSIFSSPASSIPPQEFTFGA 241          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS4_RAT (Dual specificity protein phosphatase 4 OS=Rattus norvegicus GN=Dusp4 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  200 CGICGHRSASSAEKTTTLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFG---SVDGSNPT-PLPALSAGMPS----FSFGFP 751
            C  CG          T L     P EILP FLYLGS  +A+R  +L   GI+ +LN    C N ++  + Y C+  ED    D    F +AI++++  +  +  VLVHC  G +RSA I +AYLM  K  RL ++ ++VK+RR  ++       QL ++E ++     + + ++P+ PL       P+    F F FP
Sbjct:  184 CSSCG----------TPLHDQGGPVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLTTSCAAEAASPSGPLRERGKATPTPTSQFVFSFP 370          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS4_MOUSE (Dual specificity protein phosphatase 4 OS=Mus musculus GN=Dusp4 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  200 CGICGHRSASSAEKTTTLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFG---SVDGSNPT-PLPALSAGMPS----FSFGFP 751
            C  CG          T L     P EILP FLYLGS  +A+R  +L   GI+ +LN    C N ++  + Y C+  ED    D    F +AI++++  +  +  VLVHC  G +RSA I +AYLM  K  RL ++ ++VK+RR  ++       QL ++E ++     + + ++P+ PL       P+    F F FP
Sbjct:  187 CSSCG----------TPLHDQGGPVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLTTSCAAEAASPSGPLRERGKATPTPTSQFVFSFP 373          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS16_HUMAN (Dual specificity protein phosphatase 16 OS=Homo sapiens GN=DUSP16 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.406e-16
Identity = 58/172 (33.72%), Postives = 92/172 (53.49%), Query Frame = 2
Query:  269 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQN---LYKNSFTYHCLED---DKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNP-------------TPLPALSAG 724
            P+ ILP+ LYLG   +     L++  GI  VLN   +C     + ++ F    + D   +KIL + D ++ F+E+ +    CVLVHC+ G +RSA I IAY+MK     L +++++VKE+RP+++   +   QL +YE+KI      S P              P+PA+S G
Sbjct:  159 PTRILPN-LYLGCQRDVLNKELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKNQTGASGPKSKLKLLHLEKPNEPVPAVSEG 329          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: MPL3_DICDI (MAP kinase phosphatase with leucine-rich repeats protein 3 OS=Dictyostelium discoideum GN=mpl3 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.449e-16
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 2
Query:  257 VSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKILQFDDAIQFLEQCE------RDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIF 673
            V++ PSEI+P  ++LG  D+A+ + +L+T GI+ +L  +  C+  +  +F Y+ ++D +     D  Q  EQ        R    VLVHC  G +RS+ +VI+YLMK +     Q+   V+ +RP +        QL +YE K+F
Sbjct:  629 VTSIPSEIIPG-IFLGGLDSANNAPILQTLGITHILLAIGDCEPFFPKTFKYYSIDDARDAPQYDISQHFEQTNCFIESGRKSGGVLVHCRAGISRSSTLVISYLMKYQRMTFKQAMDLVQSKRPQIQPNPGFKDQLLKYEAKLF 772          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS4_CHICK (Dual specificity protein phosphatase 4 OS=Gallus gallus GN=DUSP4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.449e-16
Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  245 TTLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFG---SVDGSNPTPL-----PALSAGMPSFSFGFP 751
            T L     P EILP FLYLGS  +A+R  +L   GI+ +LN    C N ++  + Y C+  ED    D    F +AI++++  +     VLVHC  G +RSA I +AYLM  K  +L ++ ++VK+RR  ++       QL ++E ++     +V+ ++P+        A S     F F FP
Sbjct:  169 TPLHDQGGPVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDSVKECCGRVLVHCQAGISRSATICLAYLMMKKRVKLEKAFEFVKQRRSIISPNFSFMGQLLQFESQVLATSCAVEAASPSGTLRERGKATSTPTSQFVFSFP 350          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS4_HUMAN (Dual specificity protein phosphatase 4 OS=Homo sapiens GN=DUSP4 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.810e-16
Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 2
Query:  200 CGICGHRSASSAEKTTTLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--ED----DKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGS 679
            C  CG          T L     P EILP FLYLGS  +A+R  +L   GI+ +LN    C N ++  + Y C+  ED    D    F +AI++++  +  +  VLVHC  G +RSA I +AYLM  K  RL ++ ++VK+RR  ++       QL ++E ++  +
Sbjct:  183 CSSCG----------TPLHDQGGPVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAT 337          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS8_HUMAN (Dual specificity protein phosphatase 8 OS=Homo sapiens GN=DUSP8 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.691e-15
Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 2
Query:  203 GICGHRSASSAEKTTTLQVSAFPS----EILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQN---LYKNSFTYHCLED---DKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQ--KIFGSVDG------SNPTPLPALSAGMP 730
            G+C  + A+    + +      PS     ILP  LYLGS  +     L+   GIS VLN   SC     + ++ F    + D   +K+L + D +I+F+++ +     V+VHC+ G +RSA I IAY+MK  G     ++++VK+RRPS++   +   QL EYE+  K+  ++ G        P P P+ +AG P
Sbjct:  135 GLCEGKPAALLPMSLSQPCLPVPSVGLTRILPH-LYLGSQKDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRVPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQLLEYERSLKLLAALQGDPGTPSGTPEPPPSPAAGAP 328          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: DUS8_MOUSE (Dual specificity protein phosphatase 8 OS=Mus musculus GN=Dusp8 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.208e-15
Identity = 96/333 (28.83%), Postives = 146/333 (43.84%), Query Frame = 2
Query:  203 GICGHRSASSAEKTTTLQVSAFPS----EILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQN---LYKNSFTYHCLED---DKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQ--KIFGSV--DG---SNPTPLPALSAGMPSFSFGFPKGNNDXXXXXXXXXXXXXXFNTNFGATSIFAGRPSNVPTQGFTFGAGQTDISQTSLSG-NILNQMGSDIPWTAP*FLLALGKSAKTRSGVNPIPGPPNEIWLERGSKNPNSLLLGNPPGGTKVKAPFPPPGS 1144
            G+C  + A+    + +      PS     ILP  LYLGS  +     L+   GIS VLN   SC     + ++ F    + D   +K+L + D +I+F+++ +     V+VHC+ G +RSA I IAY+MK  G     ++++VK+RRPS++   +   QL EYE+  K+  ++  DG     P PL   +AG+P      P   ++                 +  AT+   G PS          A  T   Q  L G ++ +    D       F L + KSA   S     PGPP+        + P    L +P GGT +  P P P S
Sbjct:  135 GLCEGKPATLPSMSLSQPCLPVPSVGLTRILPH-LYLGSQKDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRIPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQLLEYERSLKLLAALQTDGPHLGTPEPLMGPAAGIPLPR--LPPSTSESAA------------TGSEAATAAREGSPSAGGDAPIPSTAPATSALQQGLRGLHLSSDRLQDTNRLKRSFSLDI-KSAYAPSRRPDFPGPPDP------GEAPKLCKLDSPSGGT-LGLPSPSPDS 444          
BLAST of DY263334 vs. ExPASy Swiss-Prot
Match: SSH1_MOUSE (Protein phosphatase Slingshot homolog 1 OS=Mus musculus GN=Ssh1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.766e-15
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  287 DFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE------DDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYE 661
            D LYLGS  NAS    L+  G+  +LN      N +   F YH +        D +  +++A  F+ + +R+ +  LVHC  G +RSA+ VIAY MK  GW L +++ +VK++R          +QL EYE
Sbjct:  314 DHLYLGSEWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYHNIRVYDEETTDLLAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAYNYVKQKRSITRPNAGFMRQLSEYE 444          
The following BLAST results are available for this feature:
BLAST of DY263334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
IBR5_ARATH1.402e-8663.42Protein-tyrosine-phosphatase IBR5 OS=Arabidopsis t... [more]
DUS4_RAT1.997e-1632.83Dual specificity protein phosphatase 4 OS=Rattus n... [more]
DUS4_MOUSE1.997e-1632.83Dual specificity protein phosphatase 4 OS=Mus musc... [more]
DUS16_HUMAN3.406e-1633.72Dual specificity protein phosphatase 16 OS=Homo sa... [more]
MPL3_DICDI4.449e-1633.10MAP kinase phosphatase with leucine-rich repeats p... [more]
DUS4_CHICK4.449e-1633.33Dual specificity protein phosphatase 4 OS=Gallus g... [more]
DUS4_HUMAN5.810e-1634.34Dual specificity protein phosphatase 4 OS=Homo sap... [more]
DUS8_HUMAN1.691e-1532.31Dual specificity protein phosphatase 8 OS=Homo sap... [more]
DUS8_MOUSE2.208e-1528.83Dual specificity protein phosphatase 8 OS=Mus musc... [more]
SSH1_MOUSE3.766e-1535.11Protein phosphatase Slingshot homolog 1 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11BH06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263334 ID=DY263334; Name=DY263334; organism=Citrus clementina; type=EST; length=1301bp
TCTCATCAAACATCAATCAACTTTCTTTTTATCAAACATTTTCGGTTCTA
ATTTACCGTATTAATAATAAGGAAATTATAGTAATTAAAATTTAGAGAAA
TAAATAATAAAGATTTGGTTGTTTGTTATGAGGAAGAGGGAGAGAGAGAA
CCCCTGCTCTGTGTGCGGGCACTACCACAAGTACGAGGAAGGAGAAGTTT
GCGGGATTTGCGGCCACCGCTCTGCGTCGTCGGCAGAGAAGACGACGACG
CTCCAAGTCAGCGCGTTTCCGTCTGAGATCCTGCCCGATTTCCTCTATTT
GGGCAGCTACGACAACGCGTCTCGCTCAGGGCTTCTGAAGACTCAAGGGA
TCTCGCGTGTTCTTAATACGGTACCTTCTTGTCAAAATCTCTACAAGAAC
TCATTTACCTATCACTGCCTTGAAGATGACAAAATTTTACAATTCGATGA
TGCAATTCAGTTTTTAGAACAATGTGAGAGGGACAAAGCTTGTGTTCTCG
TGCACTGCATGTTTGGAAAAAACAGGTCGGCTGCTATTGTAATAGCATAC
TTGATGAAGTGTAAAGGATGGAGACTTGCACAGAGTCATCAGTGGGTGAA
AGAGCGGAGACCATCTGTTAACTTAACAGAAGATGTCCACCAACAGTTGC
AGGAGTATGAACAGAAGATCTTTGGGTCAGTTGATGGTAGCAATCCTACT
CCCTTGCCTGCTCTGTCTGCAGGCATGCCATCCTTTAGCTTCGGCTTCCC
AAAGGGTAATAATGATCCTGTTCCTGTACCTGTCCCTGCCCCTGCCCCTG
CCCCTGCTTTCAACACTAATTTTGGAGCAACCTCCATTTTTGCCGGTCGT
CCTTCAAATGTTCCTACACAGGGGTTCACATTTGGAGCTGGGCAGACTGA
CATCTCTCAAACCTCTCTCAGTGGCAACATTCTAAACCAAATGGGCAGTG
ATATTCCATGGACAGCTCCTTAATTCTTGTTAGCATTGGGGAAATCGGCC
AAAACAAGAAGTGGTGTGAATCCCATCCCGGGCCCTCCAAATGAAATTTG
GTTGGAAAGGGGGAGTAAAAACCCCAACTCCTTGCTTTTGGGGAACCCAC
CTGGGGGAACCAAGGTGAAGGCCCCTTTCCCCCCCCCAGGTTCTTGGAAA
GGCCCCTTTACCGGGGCCCATTGTCAAAATTTTTTATAAAAGGGTTCCCT
GTTTTTCCCGGGGAAAAAATCCCCTTTTGTGGTGTTTAACCTAAAAGTAA
ACCTTTTTTTCCTCCCGGAAAAAAACACCACCCTCCCCCCCCTCGGGGGG
A
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