DY263336

Overview
NameDY263336
Unique NameDY263336
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1224
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: GLSK_RAT (Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus GN=Gls PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.111e-12
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 2
Query:  386 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGNVEVYNILK 658
            + + S + LLF A  GDV  +        D+   D D RTALH+AA EGHVEVVK LL   K N   +DRW +T   +A ++G+ +V+ IL+
Sbjct:  554 QRVKSVINLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTALHVAAAEGHVEVVKFLLEACKVNPFPKDRWNNTPMDEALHFGHHDVFKILQ 645          
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: GLSK_HUMAN (Glutaminase kidney isoform, mitochondrial OS=Homo sapiens GN=GLS PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.111e-12
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 2
Query:  386 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGNVEVYNILK 658
            + + S + LLF A  GDV  +        D+   D D RTALH+AA EGHVEVVK LL   K N   +DRW +T   +A ++G+ +V+ IL+
Sbjct:  549 QRVKSVINLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTALHVAAAEGHVEVVKFLLEACKVNPFPKDRWNNTPMDEALHFGHHDVFKILQ 640          
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: GLSL_HUMAN (Glutaminase liver isoform, mitochondrial OS=Homo sapiens GN=GLS2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.369e-11
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 2
Query:  398 STMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGNVEVYNILK 658
            + + LLF A  GDV  +        D+   D D RTALH+AA EGH+EVVK L+   K N  A+DRWG+    DA  + ++EV  +L+
Sbjct:  486 TVVNLLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLIEACKVNPFAKDRWGNIPLDDAVQFNHLEVVKLLQ 573          
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: GLSL_MOUSE (Glutaminase liver isoform, mitochondrial OS=Mus musculus GN=Gls2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.982e-11
Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  398 STMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGNVEVYNILK 658
            + + LLF A  GDV  +        D+   D D RTALH+AA EGH+EVVK L+   K N   +DRWG+    DA  + ++EV  +L+
Sbjct:  486 TVVNLLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLIEACKVNPFVKDRWGNIPLDDAVQFNHLEVVKLLQ 573          
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: ANR28_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.792e-11
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  437 VKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWV-KILDKESHKDPERINAFT 883
            VK  E L+   S+VN  D  GRTALH AA  GH E+VKLLLS+ ANI+A D+    A   A Y G++EV  +L + GA+V    K   TP+  A       V +Y L+ L + + + +        VA +NG  V V +++D  ++ + +    FT
Sbjct:  120 VKCAESLVPLLSNVNVSDRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLD-LGVDMNEPNAYGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFT 274          
BLAST of DY263336 vs. ExPASy Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 6.792e-11
Identity = 56/168 (33.33%), Postives = 80/168 (47.62%), Query Frame = 2
Query:  395 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKR---TPMTVA---NPREVPEYEL-NPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINA 877
            D+    L  A  G ++   D +  G D+N  + +G  ALH+A+ EGHVEVV  LL ++AN+DA  + G+TA   A   G  EV  +L   GA V    +   TP+ +A   N  EV ++ L N     +   DG T     VA   G    V +L +   K   R+ A
Sbjct:   40 DANASYLRAARAGHLEKALDYIKNGVDINICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDGFT--PLAVALQQGHDQVVSLLLENDTKGKVRLPA 205          
The following BLAST results are available for this feature:
BLAST of DY263336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GLSK_RAT2.111e-1242.39Glutaminase kidney isoform, mitochondrial OS=Rattu... [more]
GLSK_HUMAN2.111e-1242.39Glutaminase kidney isoform, mitochondrial OS=Homo ... [more]
GLSL_HUMAN1.369e-1142.05Glutaminase liver isoform, mitochondrial OS=Homo s... [more]
GLSL_MOUSE3.982e-1140.91Glutaminase liver isoform, mitochondrial OS=Mus mu... [more]
ANR28_MOUSE6.792e-1136.54Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANK3_HUMAN6.792e-1133.33Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11BH08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263336 ID=DY263336; Name=DY263336; organism=Citrus clementina; type=EST; length=1224bp
CTTTCTCCTCCTCTCATTTCTTTTCAAATCCTTCCACCACCTCCCCCGCC
TCTCTCTCTCTCTCTCCTCACCACCACAGCTAAACTTTTCCATGTAAACC
TCCGCGGACGCCGTCGTTTCGACCTCCCACTCATCCGACGTCGTTTTGTG
TGAATAAGATAACGATTTAAATTAAAATACGAAAATGGAGAACTTAACGG
CGCAGTTAAAGCGAGGGATATCGCGGCAGTTCTCGACGGGATCGCTGCGT
CGGAGCCTGACGAGGCAGATGTCGAGGCAGTCGTCGTTCGATCCGAGGAG
GAATAACATGAGGTTTAGTTTCGGGAGGCAGTCGTCGTTGGATCCGATAC
GCCGGAGTCCGGTCCAGGACGAGTTGACGGTGCCGGAGAACCTTGACTCG
ACGATGCAGCTGTTGTTTATGGCATGCAGAGGTGACGTCAAGGGAGTCGA
GGATTTGCTGAACGAAGGCAGTGATGTCAACAGCATTGATCTTGACGGAC
GGACGGCGTTGCATATCGCCGCTTGTGAAGGACACGTGGAGGTTGTTAAG
TTGTTGCTTAGCAAAAAGGCTAATATCGATGCCCGTGATCGCTGGGGCAG
TACGGCAGCTGCGGATGCTAAGTACTACGGAAATGTTGAAGTTTACAATA
TCTTGAAGGCCCGTGGAGCCAAAGTTCCGAAAACCAAGAGGACACCTATG
ACTGTGGCAAATCCTCGAGAAGTTCCAGAATATGAGCTTAATCCACTAGA
GCTTCAGGTCCGGAAGGCTGATGGTATCACAAAGGGATCATATCAAGTTG
CTAAATGGAACGGTACAAAGGTTTGGGTAAAGATACTTGATAAAGAAAGC
CATAAAGACCCAGAACGCATAAATGCTTTCACGCATGAGCTAACTATAGT
AGAAAAAGCTCGGCATCCTAATGTGGTTCAGTTTGTTGGAGCTGTCACCC
AGAACATACCAATGAAGAATGGTTTAAAATATCATGGAAAAGGTGACTTG
GCAAGCTATCTTCAAAAAAAGGGGCGTCTTTCTCCATCAAAATTTCGAAA
ATTGCTCTTGACCTTGCTAGGGGGATGAATTACTTCCTGAAGGGAAACCA
AATCCAATCCTCCCTTGGGGATTTTAAAGCACAAAAAAATTTTGGCTGGA
AAAAGGGAGGGCCCAGTTGAAAAAAATTTGGGGAATTGGGGTCGGGCGAA
AAAATTTCAAAAAATATTTCCCCC
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