DY263354

Overview
NameDY263354
Unique NameDY263354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY263354 vs. ExPASy Swiss-Prot
Match: NPR1_ARATH (Regulatory protein NPR1 OS=Arabidopsis thaliana GN=NPR1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.068e-25
Identity = 63/195 (32.31%), Postives = 106/195 (54.36%), Query Frame = 3 
Query:  300 ICSDPGEPWLDAEIVV-EGKSVVVNRSILSERSQFFHRLFNL--RNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHC--QLNRLHSCCIQRIARSNLDNVCLEKELPDEVSVKSI 869
            +   P + + DA++V+ +G+ V  +R +LS RS FF        +   S +    K  L ++    +VGF++   +L Y+Y+   +  P  VS C D+ C HV+C P +++ +E++Y    F+I EL++ +Q  LL + +   +ED + IL  A  C     +L   C + I +SN+D V LEK LP+E+ VK I
Sbjct:   56 VFDSPDDFYSDAKLVLSDGREVSFHRCVLSARSSFFKSALAAAKKEKDSNNTAAVKLELKEIAKDYEVGFDSVVTVLAYVYSSRVRPPPKGVSECADENCCHVACRPAVDFMLEVLYLAFIFKIPELITLYQRHLLDVVDKVVIEDTLVILKLANICGKACMKLLDRCKEIIVKSNVDMVSLEKSLPEEL-VKEI 249

HSP 2 Score: 33.4982 bits (75), Expect = 4.068e-25
Identity = 18/40 (45.00%), Postives = 23/40 (57.50%), Query Frame = 1 
Query:  931 KKSQKIHKALDSDEFELLNLPPNE*EVT*NDAFALPYAAA 1050
            K    +HKALDSD+ EL+ L   E     +DA AL +A A
Sbjct:  265 KHVSNVHKALDSDDIELVKLLLKEDHTNLDDACALHFAVA 304
The following BLAST results are available for this feature:
BLAST of DY263354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NPR1_ARATH4.068e-2532.31Regulatory protein NPR1 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA11CB04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263354 ID=DY263354; Name=DY263354; organism=Citrus clementina; type=EST; length=1271bp
ATTTTATGATATTGAAATAATTTTTAAAGTATCAAGGTATATCTACTGCA
ATTCCCTCATTCCCCCTCTGCTTCTTTGATGCTTGCTTGCTTCATGACCG
GTGAAATTAAGTCAAAACTTTCATCTTTAAATCACATAGGTAGATCGCGA
TTCAAGCTTCAGTTATAAGCATTTCGTTTCGATTGATATTATTCTTTCTT
GATAGTATCATGGAAACTGCAAACGAAAAGTCAGCATCTTTGAGTTTTCT
CTCATCATATCCAACTTGTTGGTCTACTAATCAATCAACAGGCCCTGAAA
TTTGCTCTGATCCTGGAGAGCCATGGCTTGACGCCGAGATTGTTGTTGAG
GGCAAATCAGTAGTGGTTAATCGCAGCATATTGTCTGAGCGCAGTCAATT
TTTTCATCGGCTTTTTAATTTGAGAAATGATGGTTCTGTCAGTGAGGGGA
AACCCAAGTATCTTTTGACTGATTTGGTGCCTCATGGGAAGGTTGGATTT
GAAGCTTTCAATGATATCTTGCTTTATCTTTACACTGGAATGACTAAGGA
ATCTCCTCCAGAAGTGTCCGCGTGTGTTGATGATGCTTGTGTTCATGTTT
CTTGCCCTCCTACTATTAATTATGCAGTTGAGTTGATATATGCTTGTGCT
GCTTTTCAGATTACAGAGCTCGTATCATATTTTCAGTGTTTGCTTCTGAT
CTTGGCTGAGAATGCTCCTGTGGAAGATGTAATCCCAATTCTCGTGGCTG
CCTTGCATTGCCAACTGAACCGCCTCCATTCTTGCTGCATCCAGAGAATT
GCAAGGTCAAATCTTGACAATGTTTGTCTCGAGAAAGAGCTTCCTGATGA
AGTTTCAGTGAAATCAATCACTCCGTGTCAAATCTAANCCAGAGTCTGAA
GCTACATAAAAAAAGTGGATCCTATGCATGAAAAAGAGTCAGAAGATCCA
CAAGGCGCTGGACTCTGATGAATTTGAACTGCTGAATCTTCCTCCGAATG
AATAAGAAGTCACTTAAAATGATGCTTTTGCTCTGCCCTATGCTGCTGCC
TAACTGCACCCTAAAGGTTTTTAAGGAAGTGCTCATAAGGGGCCTTGGCT
AAATTCAACTTTAAGAAACCAAAAGGAACTAACGGGGCTTTTTGGGGCCG
CAAAGGCGAAAAGAACCCCACAATGGCTGGGAAAACCTTCTTAAAACAGG
GGAAAAATGGGCGGCCCAAAAAAAAACATCAAATAGGGGGCAAAAACAGT
GTTATAACAATCTTTTTTGCA
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