DY263908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263908 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 255.373 bits (651), Expect = 5.785e-67 Identity = 160/390 (41.03%), Postives = 221/390 (56.67%), Query Frame = 2 Query: 20 SRNEESHNLQKYGVPLYGAGWVPYDQVIRSTHXXXXXXXXXXXXXXXHGSKDEAVADKSDDIRRNYYVVLXXXXXXXNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLCQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP-GRVWDLASSAVTTPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTPLXKRIAQ---SK*SVNPFFLHVSADASSLQCITFRLPRFNCLKTPKLSIEL*LLH*IDDGLKCNGTASGNIFIKDSTNLQGSKGV*KTHLGKMDSFGFS*EIKGL 1177 + + N+Q YGVP+Y A W+P + +RS S+D+ + S R+ +VL SGI N +L+ D +NSLS+QP+ L SDLPYRMA+HP G+ICAL NSC+LF W+++ + E + G SE+V+ +L +VGQQLAL F+ EG++ AAG+E+G LRVFKWPS+ +LNES+AH+SVK L+FS G+FLVSLG GP RVWD+ +SA L+KE DE+FASCRFS + + VLYIAA T+RG SI+T +T L KR K S++ F +VSAD L GT G++ I +ST +Q + V K HLG + + FS + +GL Sbjct: 6 TETNQPSNMQTYGVPIYAADWIP-EVDVRSK-----------IIMDPEKSEDDDESSSSSSSSRSC-IVLSGGGGEGRSGISNVILICRVDLNTNSLSEQPLGRLVVGSDLPYRMAVHPREGGLICALPNSCKLFHWEDIMSREDNQAGE--SEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLG--GPVCRVWDVNASAAVASLSKEKDEMFASCRFSVDSAGNEVLYIAANTERGGSIITCDTKLWKRKWSKPIKKNSISAF--NVSADGKLLAI---------------------------------GTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGL 343
BLAST of DY263908 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 5.668e-22 Identity = 68/234 (29.06%), Postives = 111/234 (47.44%), Query Frame = 2 Query: 218 YVVLXXXXXXXNSGIRNAVLLSHFDF--ASNSLSDQPVAE--LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLCQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVTTPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA----SIVTWNTPLXKRIAQ 892 +V++ S + + LL+ F F + SLS P+A L+ P +++HP GD +C+ + C+LFE G+ I K L L+N G Q + F +G+ A G +G LR+ +WP+L +IL+E +AH S++D+ FS D +FL + G R+W + L + DE CRFS + ++ A D I TW K++++ Sbjct: 27 WVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGAT------GITILAKELLPLQNAGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGFKKLSR 254 The following BLAST results are available for this feature:
BLAST of DY263908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263908 ID=DY263908; Name=DY263908; organism=Citrus clementina; type=EST; length=1344bpback to top |