DY264031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY264031 vs. ExPASy Swiss-Prot
Match: CTR9_HUMAN (RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens GN=CTR9 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.603e-42 Identity = 107/304 (35.20%), Postives = 160/304 (52.63%), Query Frame = 3 Query: 9 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 911 +VP E+LNN+G +HF G A + F L LD R + + H E +N VT +NLARL E + + A LY+ IL ++ +YVD YLRL A+A+ + N + + EAL++N +P+A S++G+L L +W ++ F R + D+Y+ L+LGN + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY Sbjct: 448 DVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFY 712
BLAST of DY264031 vs. ExPASy Swiss-Prot
Match: CTR9_MOUSE (RNA polymerase-associated protein CTR9 homolog OS=Mus musculus GN=Ctr9 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 4.705e-42 Identity = 107/304 (35.20%), Postives = 159/304 (52.30%), Query Frame = 3 Query: 9 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 911 +VP E+LNN+G +HF G A + F L LD R + + H E +N VT +NLARL E + + A LY+ IL ++ +YVD YLRL A+A+ + N + + EAL++N +P+A S++G+L L +W ++ F R D+Y+ L+LGN + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY Sbjct: 448 DVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFY 712
BLAST of DY264031 vs. ExPASy Swiss-Prot
Match: CTR9_XENTR (RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis GN=ctr9 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.050e-41 Identity = 105/304 (34.54%), Postives = 160/304 (52.63%), Query Frame = 3 Query: 9 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 911 +VP E+LNN+G +HF G A + F L LD R + + H E +N VT +NLARL E + + + LY+ IL ++ +YVD YLRL A+A+ + N + + EAL++N +P+A S++G+L L +W ++ F R + D+Y+ L+LGN + L R + E H ++A +Y +V+ + NLYAANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY Sbjct: 448 DVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHYYNAISVTTTYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFY 712
BLAST of DY264031 vs. ExPASy Swiss-Prot
Match: CTR9_XENLA (RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis GN=ctr9 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.159e-40 Identity = 103/304 (33.88%), Postives = 161/304 (52.96%), Query Frame = 3 Query: 9 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 911 +VP E+LNN+G +HF G A + F L LD R + + H E +N ++V +NLARL E + + + LY+ IL ++ +YVD YLRL A+A+ + N + + EAL++N +P+A S++G+L L +W ++ F R + D+Y+ L+LGN + L R + E H ++A +Y +V+ + NL+AANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY Sbjct: 448 DVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD------------------------RAKAEAEHDEHYYNSISVTTSYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFY 712
BLAST of DY264031 vs. ExPASy Swiss-Prot
Match: YKD1_CAEEL (TPR repeat-containing protein B0464.2 OS=Caenorhabditis elegans GN=B0464.2 PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 1.018e-28 Identity = 85/299 (28.43%), Postives = 158/299 (52.84%), Query Frame = 3 Query: 21 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 908 E+LNN+G ++ ++E A FK A L+ + T D + +L+ R + +H+ +T+ +NLA LE + TV A +Y+ I+ + Y+D YLRL I + R+ + S + + ++ + P +++G+L ++W+ A++ F S + K D Y+ ++LGN +F L N R + E ++++A ++Y + + N+YAANG G VLA K ++ ++D+F+QV+E+ S + DVW+N+AHV + + A++MY + ++KF Sbjct: 472 EMLNNVGALYMSMKQYEKAEHHFKRAK------ERLEEQLNT---DEGSLLLE-------RRSAPEKSHL------LTIRYNLALCLEHLCRTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRHQVYESSLWLKQGVQFDQASPIVWTLIGNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYSLVALGN-VWFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKF 742 The following BLAST results are available for this feature:
BLAST of DY264031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY264031 ID=DY264031; Name=DY264031; organism=Citrus clementina; type=EST; length=1300bpback to top |