DY264226

Overview
NameDY264226
Unique NameDY264226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1344
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY264226 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.540e-38
Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 1 
Query:  352 DTILFEGCDYNHWLITMEFPKDPKPTPEEMVRTYEETCAKGLNISLEEAKKRIYACSTTTYQGFQAIMTEEESEKFQGIPGVVFILPDSYIDPQNKEYGGDKYINGTIIP 681
            +TI+  GCDYNHWLI MEFPKDP PT E+M+ TY  T A  L  S+EEAKK +YA STTTY GFQ  +TEE SEKF+G+PGV+++LPDSYID +NK+YGGDKY+NG IIP
Sbjct:   77 ETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIP 185
[Close]
BLAST of DY264226 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.120e-20
Identity = 46/113 (40.71%), Postives = 78/113 (69.03%), Query Frame = 1 
Query:  352 DTILFEGCDYNHWLITMEFPKDPKPTPEEMVRTYEETCAKGLNISLEEAKKRIYACSTTTYQGFQAIMTEEESEKFQGIPGVVFILPDSYIDPQNKEYGGDKYINGTIIPRPP 690
            +TIL +GCD+ HWL+ +E P   +PT +E++ +Y +T A+ +  S +EA+ +IY+ ST  Y  F A+++E+ S K + +  V ++LPDSY+D +NK+YGG+ +I+G  +P  P
Sbjct:   88 ETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVG-SEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDP 198
The following BLAST results are available for this feature:
BLAST of DY264226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DAG_ANTMA2.540e-3867.27DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
UMP1_ARATH3.120e-2040.71Uncharacterized protein At3g15000, mitochondrial O... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA13DH07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY264226 ID=DY264226; Name=DY264226; organism=Citrus clementina; type=EST; length=1344bp
TTACATTTTTCATATTTCCCAAAACCCTAAACAAAACCCTTCACTCTCTC
ACTCGAGACACTCACTGACGCGCAAGCAATGGCCCACGCCGCCATCCTCC
GCCTCCGCCGGTCACTACCGGCCGTCGCCGCTCTCCGACGCTCTCTCTCT
GTGGCCGTCCCTGCACTCTCCGCATCTACTCCTCTCGTAAACCCTTCCAT
TTCATCGGCGTCGTCATCGCTAATCCCGTCCTCCTCCTCCATCATCATCC
AATCTCGGCCGTTCAGATCGTCCCCGACGATCTCCCTCTCGTCTACGCCG
TCGGGTAACAAGACGTACCACTTGTATAAGGACGGCGACGAGATCACACC
CGACACGATTCTGTTCGAGGGTTGCGATTACAATCACTGGCTTATCACTA
TGGAGTTTCCTAAAGACCCGAAACCCACGCCCGAAGAAATGGTTCGGACC
TATGAAGAGACTTGCGCTAAAGGACTCAACATTAGCTTGGAGGAGGCAAA
GAAACGAATTTATGCTTGTAGCACAACGACTTATCAAGGGTTTCAAGCTA
TAATGACTGAAGAAGAGTCAGAAAAGTTTCAAGGTATACCTGGAGTTGTT
TTCATATTGCCAGATTCTTACATCGATCCACAGAACAAGGAATATGGAGG
TGACAAATACATCAATGGGACTATCATACCAAGACCACCTCCTATTCAAC
ATCATACAGGGGGGAGATTCCGTGATCGAAACAGGAACTATGATCGAAGA
CGTGACGTTAATTTTGGGGCCCCACGCAGTCAGCAAGGAGGTCCGATGCA
AAATCAGCAAGCATGGCCTGAAAATCCGCTACAGAATTCTTCGGAACCTA
TGCAAGGAGATGGTAGAAGTTATGGTGCTCATCAAAATATCAGCCTCAAC
AAAATTATCCACCACGGCAAAAATATCAACCTCAGCAAAATTATGCTCTT
CCGCAAAAATACCCCCCTCAGCAAAGTACCCCCCTCCGCAAAATATCCAA
CTTAACAAAATTTTTGGCCTCCCGGACAGGGACAAAAAAAGGGGCCCATG
CTAATGAACAAAAAAAATAAAGCGGGTTGGTGGAAAAAAATTCTAACAGG
GAAAAAGGAAAAGGTCAAAGCCTTTCAATTCGGGGCAAATAAAACCAAAG
CGGGGGAGGGGAATTTAAAATTTTTCCAAAGGGAAACCAAAGGGGGTTAT
GGGGCCGGGGGCAATTTTTTTTGGGGGTTTTTTCTCTTGGGGGGGATTTT
TTTGTGGAAAAGAGGGAAAAAAATTTTTCTTTTATTTTGTGGGAGAAAGA
ATTTTTCTCGTGGGGGTGGGGCAAGGGGAGAGAAAAGAGAAGAA
back to top